You are here

Home

ASPNIDRAFT_40672-T1, ASPNIDRAFT_40672-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40672-T1
Unique NameASPNIDRAFT_40672-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1207258..1207980+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40672-T1 ID=ASPNIDRAFT_40672-T1|Name=ASPNIDRAFT_40672-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=723bp|location=Sequence derived from alignment at ACJE01000008.1:1207258..1207980+ (Aspergillus niger ATCC 1015)
ATGGGCTCACGTCTTGCTCGACAAGTCTGTGAATATGCCGGTGGCAGTAG
ATGTGAGGAAATATCTTATATTATTTCAGACGGTCTCCTCTTGGCCTATG
TTGCTGCCGCCCATTACTCTGGAGCCATTCCCGAAGGTCTACCGGGTAAG
CGTGACGTCGATGTCTCCCAGGATTATTTCCAGCTGTGGGAGACTATGCT
GTCAAGTAATGGAGATATCTCCTATGATTATCTCACTCCTCTCTCGAATA
CCTCAAATACTCTTCCCTTGGTTAGACGCCAGGATCAGCCTTTACCGATC
CACAGAATTCAGATCACTGGTTTCGCCCATAATAACTCTCCGAAGCACGA
TATCATCGCCAATCACTATGAAAATGGTGACACCGTTCTTCAACTTCCTC
TTGCAGGAGGGGTTCCTGGTGCTAATGACACTGAAGGACTTGATTTGAGG
AAGCGGTTTGACAACCCGGGGTTTAAGATTGCGTTCACTACCAGGGGTAG
ATCACAGCTCACTCAAGCCCATCAAAAGTCTATGGCACTGGCAGGAGCTG
CTACATGGGCTGTCTATGCAGACAATGCCAATCACAAGATGGATGACTTC
ATCGGTTTTGCTGAGACTGATCATGCGGCTAACTTCTACTACCGAATCAT
TCCGGAGCTGAGAGGATTCGGAACTAATTACGAGACTGTTGATATTTGTG
GGGGAATGGCATCGTACTTGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1207258..1207980+

>ASPNIDRAFT_40672-T1 ID=ASPNIDRAFT_40672-T1|Name=ASPNIDRAFT_40672-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=723bp|location=Sequence derived from alignment at ACJE01000008.1:1207258..1207980+ (Aspergillus niger ATCC 1015)
ATGGGCTCACGTCTTGCTCGACAAGTCTGTGAATATGCCGGTGGCAGTAG
ATGTGAGGAAATATCTTATATTATTTCAGACGGTCTCCTCTTGGCCTATG
TTGCTGCCGCCCATTACTCTGGAGCCATTCCCGAAGGTCTACCGGGTAAG
CGTGACGTCGATGTCTCCCAGGATTATTTCCAGCTGTGGGAGACTATGCT
GTCAAGTAATGGAGATATCTCCTATGATTATCTCACTCCTCTCTCGAATA
CCTCAAATACTCTTCCCTTGGTTAGACGCCAGGATCAGCCTTTACCGATC
CACAGAATTCAGATCACTGGTTTCGCCCATAATAACTCTCCGAAGCACGA
TATCATCGCCAATCACTATGAAAATGGTGACACCGTTCTTCAACTTCCTC
TTGCAGGAGGGGTTCCTGGTGCTAATGACACTGAAGGACTTGATTTGAGG
AAGCGGTTTGACAACCCGGGGTTTAAGATTGCGTTCACTACCAGGGGTAG
ATCACAGCTCACTCAAGCCCATCAAAAGTCTATGGCACTGGCAGGAGCTG
CTACATGGGCTGTCTATGCAGACAATGCCAATCACAAGATGGATGACTTC
ATCGGTTTTGCTGAGACTGATCATGCGGCTAACTTCTACTACCGAATCAT
TCCGGAGCTGAGAGGATTCGGAACTAATTACGAGACTGTTGATATTTGTG
GGGGAATGGCATCGTACTTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40672ASPNIDRAFT_40672Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40672-T1.exon1ASPNIDRAFT_40672-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40672-T1.cdsASPNIDRAFT_40672-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40672-T1ASPNIDRAFT_40672-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000081.3
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1207258..1207980 +
Powered by Drupal