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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:1278101..1279852+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_40691-T1 ID=ASPNIDRAFT_40691-T1|Name=ASPNIDRAFT_40691-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1752bp|location=Sequence derived from alignment at ACJE01000008.1:1278101..1279852+ (Aspergillus niger ATCC 1015)
ATGGACCTGGAGACGAACAAACGCAGCAGTAAAACATCTTCCCGCTCTCA
ACAAGGATGCACAAACTGCCGACGGAGCAGGCTTAAATGCGACGAGAAAA
AGCCAATCTGCACCCGATGCTGGCAAAAGGATCTACAATGCCAGACAATA
TTCCGGCTGAAATGGGAGTCAAATTATCGTGATCGAGGTATCGCCTTTGG
CAGGTCGAGGCTGAATAGGAAGTCTCCTGATCACCCAACTGGTGCTCCGG
GACGGGATTCGACTTTCCCCAAAGACACTACATGGGTTGCGATCCCGACG
GTTCAGTCTTGGGCATTCGTGAATAACGATACTTCCTTGATTCGACGACT
TTATGCCGAGGAGCAAGGATACACCGAACCACATCTTCTCCCGGCCGTCG
ATGCTAGAACGGCCCTTGGGGAGCTGGGGCCTCGTGAGCCAGCATCGTCT
TTCACAACATCGCCACCCGATACCGCTCAATTAATGGATATAAAAGAAGC
AATGTTACAGAACTTACAATCACCCCTCTCACCATTTCCATCCCTAGATG
ATCTGGGAAATCAAGTACTGTTCGACTTTTACGTGAACCAGATATGTCCT
CGAACAGTACAGAGTCCTCTATCCATGTCACCCTTTGCCTCAGTCATTCT
TCCCTATTGTGTATCCGCTCCGCCCACAGTTCTGCAGGCAATACAGGCGC
TGGCCGCCTGTCACTGGTCCCAGAGCGACCCAAGGTATAGCGAACTTTCT
CTGCAACTAAAGGCTCGAGTTCTGAACCATCTCCGACATCGTATCAATAC
GCATCCCCAGGATATAGTCACAGAAGACCCTGAAATATTGGTCATTATGA
TGTTTTTATGTTTATATGACATTGTTGATGACTGCAATCAGCAGTGGATT
ATACATCTTCAGGGGGCAAAAGATATCATTCGACTTCGCCGACGACAGCA
GATTTTATTGAAAGGTGCAACGCAAGGTGTACAGCAAGACCCAGTATCGT
CTTTCACGGAGCTTTTCTTCGCTTTCCAGGACGTGATGGGGCGGACTGCC
TGTGGAAAAGCGGAGCTTTTTGGATCGACCTATTGGCGTGAAGAAGATAC
GACCATAAATCCTTGGATGGGTTGCAGCCCTGCTCTTGTCTCTGTCTTAT
TCTCAATCATGGATCTGAGTCGGTCTAGACGGCATGTCATCGCCGATGAA
GGTCACGAAGCTTTTAATGTTAGAGCTTCCGCTCTGATCAACAGATTGAA
GGATATCAAACAGGAGATGCGAATCGATGGAGACAGCCAGGTCATTCAGA
GAATTGCCGAGCTAAAGAGAGTGACTTCAATTGTCTATCTAAACTGCGCA
TTGTATGGCTTGACACCATCCGATTCCATAACCAAGACCTACGTGCGCAA
AATATTGAAAGATATTGTTGAACTACTCGCAATGGAGCCATCTTGTCAGG
TCGTCTGGCCTCTTTTTGTTGCTGCCGTGGAACTAGATCCTCTTGACCTT
GCGATCATGTTAGATCCGGATACTGGGAAAATGACGGACGGACGAAGGCT
TGTCTTGGAACTGCTTATGAAGATGAGTAAAAGCAGTGTTTCTAGTGTGA
CTCGGGCGCGTGTCGTCGTCGAGCAGGTGTGGAAGTCCCGCGATTTTTGT
TTGTCAAAGTCTTCCCGAGAAAGGTCACCAGCGTCTATCACGGATTTAAA
TGACTGGGAAGAGTATGTTATGCCTGTTAGTGATGCTTTGAGCCTGGCAT
AA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:1278101..1279852+ >ASPNIDRAFT_40691-T1 ID=ASPNIDRAFT_40691-T1|Name=ASPNIDRAFT_40691-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1752bp|location=Sequence derived from alignment at ACJE01000008.1:1278101..1279852+ (Aspergillus niger ATCC 1015)
ATGGACCTGGAGACGAACAAACGCAGCAGTAAAACATCTTCCCGCTCTCA
ACAAGGATGCACAAACTGCCGACGGAGCAGGCTTAAATGCGACGAGAAAA
AGCCAATCTGCACCCGATGCTGGCAAAAGGATCTACAATGCCAGACAATA
TTCCGGCTGAAATGGGAGTCAAATTATCGTGATCGAGGTATCGCCTTTGG
CAGGTCGAGGCTGAATAGGAAGTCTCCTGATCACCCAACTGGTGCTCCGG
GACGGGATTCGACTTTCCCCAAAGACACTACATGGGTTGCGATCCCGACG
GTTCAGTCTTGGGCATTCGTGAATAACGATACTTCCTTGATTCGACGACT
TTATGCCGAGGAGCAAGGATACACCGAACCACATCTTCTCCCGGCCGTCG
ATGCTAGAACGGCCCTTGGGGAGCTGGGGCCTCGTGAGCCAGCATCGTCT
TTCACAACATCGCCACCCGATACCGCTCAATTAATGGATATAAAAGAAGC
AATGTTACAGAACTTACAATCACCCCTCTCACCATTTCCATCCCTAGATG
ATCTGGGAAATCAAGTACTGTTCGACTTTTACGTGAACCAGATATGTCCT
CGAACAGTACAGAGTCCTCTATCCATGTCACCCTTTGCCTCAGTCATTCT
TCCCTATTGTGTATCCGCTCCGCCCACAGTTCTGCAGGCAATACAGGCGC
TGGCCGCCTGTCACTGGTCCCAGAGCGACCCAAGGTATAGCGAACTTTCT
CTGCAACTAAAGGCTCGAGTTCTGAACCATCTCCGACATCGTATCAATAC
GCATCCCCAGGATATAGTCACAGAAGACCCTGAAATATTGGTCATTATGA
TGTTTTTATGTTTATATGACATTGTTGATGACTGCAATCAGCAGTGGATT
ATACATCTTCAGGGGGCAAAAGATATCATTCGACTTCGCCGACGACAGCA
GATTTTATTGAAAGGTGCAACGCAAGGTGTACAGCAAGACCCAGTATCGT
CTTTCACGGAGCTTTTCTTCGCTTTCCAGGACGTGATGGGGCGGACTGCC
TGTGGAAAAGCGGAGCTTTTTGGATCGACCTATTGGCGTGAAGAAGATAC
GACCATAAATCCTTGGATGGGTTGCAGCCCTGCTCTTGTCTCTGTCTTAT
TCTCAATCATGGATCTGAGTCGGTCTAGACGGCATGTCATCGCCGATGAA
GGTCACGAAGCTTTTAATGTTAGAGCTTCCGCTCTGATCAACAGATTGAA
GGATATCAAACAGGAGATGCGAATCGATGGAGACAGCCAGGTCATTCAGA
GAATTGCCGAGCTAAAGAGAGTGACTTCAATTGTCTATCTAAACTGCGCA
TTGTATGGCTTGACACCATCCGATTCCATAACCAAGACCTACGTGCGCAA
AATATTGAAAGATATTGTTGAACTACTCGCAATGGAGCCATCTTGTCAGG
TCGTCTGGCCTCTTTTTGTTGCTGCCGTGGAACTAGATCCTCTTGACCTT
GCGATCATGTTAGATCCGGATACTGGGAAAATGACGGACGGACGAAGGCT
TGTCTTGGAACTGCTTATGAAGATGAGTAAAAGCAGTGTTTCTAGTGTGA
CTCGGGCGCGTGTCGTCGTCGAGCAGGTGTGGAAGTCCCGCGATTTTTGT
TTGTCAAAGTCTTCCCGAGAAAGGTCACCAGCGTCTATCACGGATTTAAA
TGACTGGGAAGAGTATGTTATGCCTGTTAGTGATGCTTTGAGCCTGGCAT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:1278101..1279852 + |
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