You are here

Home

ASPNIDRAFT_40728-T1, ASPNIDRAFT_40728-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40728-T1
Unique NameASPNIDRAFT_40728-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1386737..1387828+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40728-T1 ID=ASPNIDRAFT_40728-T1|Name=ASPNIDRAFT_40728-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1092bp|location=Sequence derived from alignment at ACJE01000008.1:1386737..1387828+ (Aspergillus niger ATCC 1015)
ATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGA
CGACTACATCCCGCGCTACCAACTCCTCTCGTCCATCGACGCCTCCAAAA
AGCGCTCCCTCGCCTACGCCCACTTCCAAAACTGCAACCTCTGCCCGCGT
CGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGC
CGAAACCGCAAAAGTGAACACCATCGCCCCGCATCGCGGCGAGGAACCCT
GCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGCAAT
ATGCGGTGTGTGTTTTGTCAGAATCATGTGCGTATACACCCCCCCACCCC
TGGGTTTAGATAATTGTAGTGGGTTGACAGTTGTGGACAGGATATAGCGC
ACAAGAAAGCAGGTCATGATCTCACGCCCACCGAGCTAGCGGAGTGGTAC
ATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCC
AGAGCACGTCGTCCCGCAAGTCGTGCTTTCGATTCTAGACGCGAGGGATA
TGGGATTAAATATCCCTATCGTCTATAACACATCCAGCTTCGACTCCCTC
GACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTT
TAAAGTCTGGAAGGGGAGTACCGCGAAGCGATTACTCAAAGCGGAAGAGT
ATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATGCATCGGCAGGTAGGG
GATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAG
ACATTTGGTGATGCCGGGGTTGGAGGATGAGGGGAGGGAGATTGTGAGAT
GGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTGCATGTTATGGAGCAG
TATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGA
GGAGGAGAATGGGGAGGTCAGGTATAAGGAGATTAATCGCGCTGTTAGGG
AGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTGCAGGCGGGGTTGTGG
AGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1386737..1387828+

>ASPNIDRAFT_40728-T1 ID=ASPNIDRAFT_40728-T1|Name=ASPNIDRAFT_40728-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2058bp|location=Sequence derived from alignment at ACJE01000008.1:1386737..1387828+ (Aspergillus niger ATCC 1015)
ATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGA
CGACTACATCCCGCGCTACCAACTCCTCTCGTCCATCGACGCCTCCAAAA
AGCGCTCCCTCGCCTACGCCCACTTCCAAAACTGCAACCTCTGCCCGCGT
CGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGC
CGAAACCGCAAAAGTGAACACCATCGCCCCGCATCGCGGCGAGGAACCCT
GCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGCAAT
ATGCGGTGTGTGTTTTGTCAGAATCATGATATAGCGCACAAGAAAGCAGG
TCATGATCTCACGCCCACCGAGCTAGCGGAGTGGTACATGAAACTCCAGA
CTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTCGTC
CCGCAAGTCGTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATAT
CCCTATCGTCTATAACACATCCAGCTTCGACTCCCTCGACTCATTACATC
TGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGGAAG
GGGAGTACCGCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGC
GAAGGAGAGCATCAAGGAGATGCATCGGCAGGTAGGGGATTTGAGTTTCA
CGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTGATG
CCGGGGTTGGAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAA
TGTGTCCAGGGATTTGTATGTGCATGTTATGGAGCAGTATAGGCCGGATG
CGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAATGGG
GAGGTCAGGTATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGG
GGGTGTTAGGGAGGCTGCGGTGCAGGCGGGGTTGTGGAGGTTTTGTGAGG
TTAATGAGATGGGGGGGTTTCATCTGTAGATGTATACATCAAAACGCCAC
CTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCA
ACTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCC
ACTTCCAAAACTGCAACCTCTGCCCGCGTCGCTGCGGCGTCAACCGATAC
CATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACAC
CATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCT
CCGGCAGCGTGTTTTTCTCCGGGTGCAATATGCGGTGTGTGTTTTGTCAG
AATCATGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGA
GCTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAATA
TTAACCTCGTCACGCCAGAGCACGTCGTCCCGCAAGTCGTGCTTTCGATT
CTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATC
CAGCTTCGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGATA
TATACCTCCCTGACTTTAAAGTCTGGAAGGGGAGTACCGCGAAGCGATTA
CTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGAT
GCATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGA
AGGGAGTGTTGTTGAGACATTTGGTGATGCCGGGGTTGGAGGATGAGGGG
AGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGT
GCATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGA
GAGGGAGGAGTGGAGAGGAGGAGAATGGGGAGGTCAGGTATAAGGAGATT
AATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGT
GCAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTC
ATCTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40728ASPNIDRAFT_40728Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40728-T1.exon1ASPNIDRAFT_40728-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40728-T1.exon2ASPNIDRAFT_40728-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40728-T1.cdsASPNIDRAFT_40728-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40728-T1ASPNIDRAFT_40728-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR040085
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR007197
DBxrefInterPro:IPR016431
DBxrefPFAM:PF04055
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1386737..1387828 +
Powered by Drupal