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ASPNIDRAFT_40838-T1, ASPNIDRAFT_40838-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40838-T1
Unique NameASPNIDRAFT_40838-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1734679..1735743+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40838-T1 ID=ASPNIDRAFT_40838-T1|Name=ASPNIDRAFT_40838-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1065bp|location=Sequence derived from alignment at ACJE01000008.1:1734679..1735743+ (Aspergillus niger ATCC 1015)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
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Coding sequence (CDS) from alignment at ACJE01000008.1:1734679..1735743+

>ASPNIDRAFT_40838-T1 ID=ASPNIDRAFT_40838-T1|Name=ASPNIDRAFT_40838-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2004bp|location=Sequence derived from alignment at ACJE01000008.1:1734679..1735743+ (Aspergillus niger ATCC 1015)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAT
CGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCCTTTCTTATTCTGG
AGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCTTAACCTGGGAGTG
ACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGGTCTTCCATCAAGC
GTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCGCTTCGCTTTGGCC
GACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATACGGCCTCACTACG
CCAATTTCGATTGCTATCGGCATAGGGGTACGCACAACGTATAACTCGGG
ATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGATGCTGTCTCAGCCG
GCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGCTCGCGACTTTCTG
TTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGCTGGGAATGATCTT
CTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATTGGGAAGTGGGCAT
GAATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTG
GAGGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACA
CCTGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAG
CATGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATC
CCATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGT
CGCAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCA
GCACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGT
CCTGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGC
TTCCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACG
CGACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAG
ATCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCCTTTCTTATTCT
GGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCTTAACCTGGGAG
TGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGGTCTTCCATCAA
GCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCGCTTCGCTTTGG
CCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATACGGCCTCACTA
CGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAACGTATAACTCG
GGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGATGCTGTCTCAGC
CGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGCTCGCGACTTTC
TGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGCTGGGAATGATC
TTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATTGGGAAGTGGGC
ATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
GO:0055085transmembrane transport
GO:0071577zinc ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005385zinc ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40838ASPNIDRAFT_40838Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40838-T1.exon1ASPNIDRAFT_40838-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40838-T1.exon2ASPNIDRAFT_40838-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40838-T1.cdsASPNIDRAFT_40838-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40838-T1ASPNIDRAFT_40838-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefInterPro:IPR004698
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1734679..1735743 +
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