You are here

Home

ASPNIDRAFT_40840-T1, ASPNIDRAFT_40840-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40840-T1
Unique NameASPNIDRAFT_40840-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1738910..1740346+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40840-T1 ID=ASPNIDRAFT_40840-T1|Name=ASPNIDRAFT_40840-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1437bp|location=Sequence derived from alignment at ACJE01000008.1:1738910..1740346+ (Aspergillus niger ATCC 1015)
ATGTCTGATCACGAGTTCAGGGTACGGCGCGTAAAATGCGACGAGGCACC
GGGGTCTTGTAAGAATTGTACTTCTACGGGCCGAGTGTGCGACGGATACG
ATATGCACCGATTGCCCATCAAGCGAGCATTATGTCTTCCAACCCTAGGA
CCAAGGTCTGAAGGGATCATGACATCCGATGAGAAGCGGGGATTTTCTTA
CTTTCAACACCGCCTTGTTCCTGACCTTGTTGGATTCTTTGACTCCTGGC
TCTGGCAGAAGCTGGTCTTGCAGATGTGTCATGCAGATCCAGCGGTATGC
CATGCTGTCAACATGGTAAGCGCCATTCATCAAGATGCCGAGGAAAGAGG
CATGCGGCTGGCAGGAGAGGATCTGCAGAATCCAAAACATCGGTTCGCAC
TTGAGCAGGCCGCCCGATCTTTTTCACATTTGCAGAAACGCAGGGCCTCT
CCCGATCCACAGTTGCGCGAGGTCGTGCTGGTGTGCTGCTTGCTTTTTGT
TATGGCAGAGCTATTGTTGGGAGAATTTGCCAGAGCCTTTATACACCTAC
GTAGTGGCACGCAAATTTTGGAGGAGTCGCTGCGCCTTGGGATACCCGTG
ATTCCTTGTCTGTCTGAGACTCTCCGCATCTTGAAGTCCCAGTCGTCGCA
TGTTGGAGACTTCGAGTCAGACCCAGGCCTTCAAAGCGAAAAGAACAATG
ATTTTGTTATCGAATCGTCGGAGGACTTTGATAATCTGAAAGAGGCGCGT
CGAGGCTATCAGAGAATTATGTATAGCGTGATTCCATTCATTGCTACGGT
TTGGGGGCTTTCAGAAACAGAGATATTGGCGAATTACGAAACCCTTTGGA
TGAAGCGACAGAAGCTTCTATCCTCGCTGGAATCCCTTGCAGAGCGGTTC
GAGTCGTTTTACCAACAAAAGTATTCCAGTCTTAGCACGAAAGAGCAAAC
CGGAGCGGATATCGTGCGGCTTCAATTGGTTGCGAAGACGATCGTACTGA
AAACGTGTCTGCTTGACGAGTATGATGACAGACTGCTCACACTTGAATAC
GGTAACCTGTTATCGGAATACGAAGAATTTATGGACAAATTCCCCTGCCG
TCCTACTATTACACTCGACTACGGATTGAGCTTTGGGCTATTCGCGGTGG
CATCGAAGTGCCCAGACATGGGCATCCGGCTTCGAGCTGTTGATGCCTTG
CGCAGGTGGCCGCATTACGAGGGCATGATTAATTCCAACGCCGGAGCGGG
GATAGCGGTGGAAGCGATCAAGTTGGATCTACACAAAATGCAGCAGGAAG
ATGCGGTGCGAGTATCTTCAATGGATCAGGAACCTGATGTAAGCTTTTGG
GAAATGATCAGAAGCACGCAGAATGGGACGCAGTGGCCGGCTGTACGCGA
TGTCGAGCTGCGGACGAAGGAGACTAGACGGCTGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1738910..1740346+

>ASPNIDRAFT_40840-T1 ID=ASPNIDRAFT_40840-T1|Name=ASPNIDRAFT_40840-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1437bp|location=Sequence derived from alignment at ACJE01000008.1:1738910..1740346+ (Aspergillus niger ATCC 1015)
ATGTCTGATCACGAGTTCAGGGTACGGCGCGTAAAATGCGACGAGGCACC
GGGGTCTTGTAAGAATTGTACTTCTACGGGCCGAGTGTGCGACGGATACG
ATATGCACCGATTGCCCATCAAGCGAGCATTATGTCTTCCAACCCTAGGA
CCAAGGTCTGAAGGGATCATGACATCCGATGAGAAGCGGGGATTTTCTTA
CTTTCAACACCGCCTTGTTCCTGACCTTGTTGGATTCTTTGACTCCTGGC
TCTGGCAGAAGCTGGTCTTGCAGATGTGTCATGCAGATCCAGCGGTATGC
CATGCTGTCAACATGGTAAGCGCCATTCATCAAGATGCCGAGGAAAGAGG
CATGCGGCTGGCAGGAGAGGATCTGCAGAATCCAAAACATCGGTTCGCAC
TTGAGCAGGCCGCCCGATCTTTTTCACATTTGCAGAAACGCAGGGCCTCT
CCCGATCCACAGTTGCGCGAGGTCGTGCTGGTGTGCTGCTTGCTTTTTGT
TATGGCAGAGCTATTGTTGGGAGAATTTGCCAGAGCCTTTATACACCTAC
GTAGTGGCACGCAAATTTTGGAGGAGTCGCTGCGCCTTGGGATACCCGTG
ATTCCTTGTCTGTCTGAGACTCTCCGCATCTTGAAGTCCCAGTCGTCGCA
TGTTGGAGACTTCGAGTCAGACCCAGGCCTTCAAAGCGAAAAGAACAATG
ATTTTGTTATCGAATCGTCGGAGGACTTTGATAATCTGAAAGAGGCGCGT
CGAGGCTATCAGAGAATTATGTATAGCGTGATTCCATTCATTGCTACGGT
TTGGGGGCTTTCAGAAACAGAGATATTGGCGAATTACGAAACCCTTTGGA
TGAAGCGACAGAAGCTTCTATCCTCGCTGGAATCCCTTGCAGAGCGGTTC
GAGTCGTTTTACCAACAAAAGTATTCCAGTCTTAGCACGAAAGAGCAAAC
CGGAGCGGATATCGTGCGGCTTCAATTGGTTGCGAAGACGATCGTACTGA
AAACGTGTCTGCTTGACGAGTATGATGACAGACTGCTCACACTTGAATAC
GGTAACCTGTTATCGGAATACGAAGAATTTATGGACAAATTCCCCTGCCG
TCCTACTATTACACTCGACTACGGATTGAGCTTTGGGCTATTCGCGGTGG
CATCGAAGTGCCCAGACATGGGCATCCGGCTTCGAGCTGTTGATGCCTTG
CGCAGGTGGCCGCATTACGAGGGCATGATTAATTCCAACGCCGGAGCGGG
GATAGCGGTGGAAGCGATCAAGTTGGATCTACACAAAATGCAGCAGGAAG
ATGCGGTGCGAGTATCTTCAATGGATCAGGAACCTGATGTAAGCTTTTGG
GAAATGATCAGAAGCACGCAGAATGGGACGCAGTGGCCGGCTGTACGCGA
TGTCGAGCTGCGGACGAAGGAGACTAGACGGCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40840ASPNIDRAFT_40840Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40840-T1.exon1ASPNIDRAFT_40840-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40840-T1.cdsASPNIDRAFT_40840-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40840-T1ASPNIDRAFT_40840-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR021858
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1738910..1740346 +
Powered by Drupal