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ASPNIDRAFT_41070-T1, ASPNIDRAFT_41070-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41070-T1
Unique NameASPNIDRAFT_41070-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1218229..1220421-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41070-T1 ID=ASPNIDRAFT_41070-T1|Name=ASPNIDRAFT_41070-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2193bp|location=Sequence derived from alignment at ACJE01000013.1:1218229..1220421- (Aspergillus niger ATCC 1015)
ATGGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGC
CTTGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTC
AGCACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCC
AACTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCT
CTCATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTG
TCGGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCA
GGGTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGT
GGGTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTG
CTGGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCT
CGTATTGGACAAGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCT
TGAGATGAAGCATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAA
AAGATTTCAACTACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGG
TACAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCA
ACTACGTTACCCCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTG
TGGGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATG
CAACTCGCTCAGATGATGGATCGATATTTGCTCGGGGAATACGATGAAGC
TTGCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTT
TCCTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGAT
GACGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCA
GGAGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGG
AAGCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAAC
GCTCCGGACATGGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGA
CAAGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGA
AATATGAGACCCGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAG
GATGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGT
TGACCAACAAGGCCTGACAATCCAGGATATTGACCGTATGAACACGGAAC
GTGAACGCCTGCAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAA
ACGCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGA
AGATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATA
GTTTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTC
AGTCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCT
AGCGAACCGAATCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCA
CTGGCTATCACCCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTG
CGCAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCG
TGCCATTGATGATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGG
AAGCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCA
CGTGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCA
GAAGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCA
AGATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAG
ATGAATACTAACATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTT
GCGTGAGGAGCTACACACCAATGTGGAGAGCATGCTGAACGATGTCATCC
GTTTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTT
GTCGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGA
GGACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGA
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Coding sequence (CDS) from alignment at ACJE01000013.1:1218229..1220421-

>ASPNIDRAFT_41070-T1 ID=ASPNIDRAFT_41070-T1|Name=ASPNIDRAFT_41070-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2193bp|location=Sequence derived from alignment at ACJE01000013.1:1218229..1220421- (Aspergillus niger ATCC 1015)
ATGGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCAACCCTCCTCGGC
CTTGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTCCTTTCACCTCTC
AGCACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCCCAACAGCCC
AACTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGATGCCGGTCT
CTCATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCCATGGTCCTAGTG
TCGGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAAAGCACAGCA
GGGTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTCACGACCATCTGT
GGGTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAGTCCCGTCAGTTG
CTGGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGGTCTTTCCAAGCT
CGTATTGGACAAGAGCTCTTGGAATATCTGACGCATAACAATTTTGAGCT
TGAGATGAAGCATTCACTGGGGCAGAACACCTTACGGTCTCCTACTCAAA
AAGATTTCAACTACATCTTCCAGTGGCTGTATCATCGCATTGATCCCGGG
TACAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACCTATTCTCAAGCA
ACTACGTTACCCCTACGAAAAGGGTATCACTAAGTCGCAGATTGCGGCTG
TGGGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTGCATTGGTTGATG
CAACTCGCTCAGATGATGGATCGATATTTGCTCGGGGAATACGATGAAGC
TTGCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGATTATCTTCCGTT
TCCTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGGGAAGATGAGGAT
GACGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGAAATGATGGCCCA
GGAGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGATGGAGTCTTTGG
AAGCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAGATGGAGAAGAAC
GCTCCGGACATGGCCAAGCTAGACAAGCACTTCAGGATTTTGGAGGACGA
CAAGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGGGCAAGATCGAGA
AATATGAGACCCGTATCAAATTCCTGGATGACGAGCTTAAGAAGACGGAG
GATGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCAGGCCAGTGT
TGACCAACAAGGCCTGACAATCCAGGATATTGACCGTATGAACACGGAAC
GTGAACGCCTGCAGAGGAATCTTGACGATACGGTCAATCGGTTGGAAGAA
ACGCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAGAAAACTCGA
AGATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCGGATACCAGAATA
GTTTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGACGATTACGAACTC
AGTCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGTCGGTGGTCT
AGCGAACCGAATCTCTACCGATGGAGATCGACTATTGGCGGACCCGTTCA
CTGGCTATCACCCAGCACACTTGCTCAACCTCGATCTCCGCGGCATCGTG
CGCAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGAGCGCCGGAAGCG
TGCCATTGATGATGACTTGGAACGACGCAATCTCTTGGACAACATCAAGG
AAGCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAGCATAAGGCA
CGTGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCACCACAACGCA
GAAGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGAAGGAGCTGGCCA
AGATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATGGAGCAGCGCGAG
ATGAATACTAACATTGAGTATGAACAATTGACTCTCCGCGCAAATGCGTT
GCGTGAGGAGCTACACACCAATGTGGAGAGCATGCTGAACGATGTCATCC
GTTTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTACGAGAGCTTTGTT
GTCGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCAGTTTGCAGATGA
GGACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0031262Ndc80 complex
Vocabulary: Biological Process
TermDefinition
GO:0051315attachment of mitotic spindle microtubules to kinetochore
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NDC80ASPNIDRAFT_41070Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41070-T1.cdsASPNIDRAFT_41070-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41070-T1.exon1ASPNIDRAFT_41070-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41070-T1ASPNIDRAFT_41070-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092619RJ
DBxrefInterPro:IPR038273
DBxrefInterPro:IPR005550
DBxrefPFAM:PF03801
Productkinetochore-associated Ndc80 complex subunit ndc80
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1218229..1220421 -
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