You are here

Home

ASPNIDRAFT_41098-T1, ASPNIDRAFT_41098-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41098-T1
Unique NameASPNIDRAFT_41098-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1132190..1133149-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41098-T1 ID=ASPNIDRAFT_41098-T1|Name=ASPNIDRAFT_41098-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=960bp|location=Sequence derived from alignment at ACJE01000013.1:1132190..1133149- (Aspergillus niger ATCC 1015)
ATGTCGATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTC
AGAGGAATTCACCCAACCCGATCTGGAAAAGGAGTTGCACGTTTCCCTTC
GAAATGGCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAA
AAAGCGGAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGA
CGCTATCATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCG
CAGGCTTATCTGCTCTGGGAGACACCAAGGTCGTGGTTTTTGGCGGCATG
GCCGAACTCATTGCAGGAGCCATCTCCATGGGATTGGGAGGCTACTTGGG
TGCGAAGAGCGAAGAGTGAGTAGTTTTCAAACTTCCCCAAGTATACAAAA
TTAGCAAAAGAAATATGCTGACCAGTTTTAGGGAGTCCTACCGCGCAACC
CTGAAGGAAACAAAGCAAGAGATTCTAACCGACCCCGCATCGGTGACTGA
GACGATCTCGGATGTCTTTGCGCCCTATGACCTCCCCGCAGAGCTGGTGG
GAGAGCTCACGCGACACCTCTCCTCATCCCCTAACCTCCCCTCCTTCCTC
ATGAACTTCCATCACACCGTCCAGGAACCCTCTGGCTCTCGTGCCTTCAT
CTGTGCCTTGACCATTGCATTGGGATACTTCATCGGTGGCTTCGTGCCAC
TCCTCCCCTACTTCTTCGTTGGGCCCCATGATGTACTCTCTGCCCTGCGC
TGGTCAATCGCCACGATGGCCGTTGCTTTGTTCTTGTTCGGTTACGGCAA
GACGTGCTTCGTCAGCGGATGGAAAGGATATCGGAACATCAGACGCGGTG
TCATTGGCGGCTTGCAGATGGTTCTAGTCGGAGGCGTTGCAGCAGGCTCT
GCAATGGGGCTGGTGAAGGGGTTCCAAATGCTGGCTGACTCTCATAGTCA
TGAGCATTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:1132190..1133149-

>ASPNIDRAFT_41098-T1 ID=ASPNIDRAFT_41098-T1|Name=ASPNIDRAFT_41098-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1788bp|location=Sequence derived from alignment at ACJE01000013.1:1132190..1133149- (Aspergillus niger ATCC 1015)
GGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGCAAGAGATTCTAACCG
ACCCCGCATCGGTGACTGAGACGATCTCGGATGTCTTTGCGCCCTATGAC
CTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACACCTCTCCTCATCCCC
TAACCTCCCCTCCTTCCTCATGAACTTCCATCACACCGTCCAGGAACCCT
CTGGCTCTCGTGCCTTCATCTGTGCCTTGACCATTGCATTGGGATACTTC
ATCGGTGGCTTCGTGCCACTCCTCCCCTACTTCTTCGTTGGGCCCCATGA
TGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGATGGCCGTTGCTTTGT
TCTTGTTCGGTTACGGCAAGACGTGCTTCGTCAGCGGATGGAAAGGATAT
CGGAACATCAGACGCGGTGTCATTGGCGGCTTGCAGATGGTTCTAGTCGG
AGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGAAGGGGTTCCAAATGC
TGGCTGACTCTCATAGTCATGAGCATTAGATGTCGATCTCTTCTCTTCGA
GGCCTTCTTACCAACTACTCCCCCGTTTCAGAGGAATTCACCCAACCCGA
TCTGGAAAAGGAGTTGCACGTTTCCCTTCGAAATGGCGACGACAGCGAGT
CCTCCTCATCCCGGTCAGTCTGCCGGGAAAAAGCGGAGAAGAAGGAGTCC
AAAATCGTTGACGGACGTATCGTCTCCGACGCTATCATCGGTCTCTCCGA
CGGCATGACGGTTCCATTTGCCCTGACCGCAGGCTTATCTGCTCTGGGAG
ACACCAAGGTCGTGGTTTTTGGCGGCATGGCCGAACTCATTGCAGGAGCC
ATCTCCATGGGATTGGGAGGCTACTTGGGTGCGAAGAGCGAAGAGGAGTC
CTACCGCGCAACCCTGAAGGAAACAAAGCAAGAGATTCTAACCGACCCCG
CATCGGTGACTGAGACGATCTCGGATGTCTTTGCGCCCTATGACCTCCCC
GCAGAGCTGGTGGGAGAGCTCACGCGACACCTCTCCTCATCCCCTAACCT
CCCCTCCTTCCTCATGAACTTCCATCACACCGTCCAGGAACCCTCTGGCT
CTCGTGCCTTCATCTGTGCCTTGACCATTGCATTGGGATACTTCATCGGT
GGCTTCGTGCCACTCCTCCCCTACTTCTTCGTTGGGCCCCATGATGTACT
CTCTGCCCTGCGCTGGTCAATCGCCACGATGGCCGTTGCTTTGTTCTTGT
TCGGTTACGGCAAGACGTGCTTCGTCAGCGGATGGAAAGGATATCGGAAC
ATCAGACGCGGTGTCATTGGCGGCTTGCAGATGGTTCTAGTCGGAGGCGT
TGCAGCAGGCTCTGCAATGGGGCTGGTGAAGGGGTTCCAAATGCTGGCTG
ACTCTCATAGTCATGAGCATTAGATGTCGATCTCTTCTCTTCGAGGCCTT
CTTACCAACTACTCCCCCGTTTCAGAGGAATTCACCCAACCCGATCTGGA
AAAGGAGTTGCACGTTTCCCTTCGAAATGGCGACGACAGCGAGTCCTCCT
CATCCCGGTCAGTCTGCCGGGAAAAAGCGGAGAAGAAGGAGTCCAAAATC
GTTGACGGACGTATCGTCTCCGACGCTATCATCGGTCTCTCCGACGGCAT
GACGGTTCCATTTGCCCTGACCGCAGGCTTATCTGCTCTGGGAGACACCA
AGGTCGTGGTTTTTGGCGGCATGGCCGAACTCATTGCAGGAGCCATCTCC
ATGGGATTGGGAGGCTACTTGGGTGCGAAGAGCGAAGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0030026cellular manganese ion homeostasis
Vocabulary: Molecular Function
TermDefinition
GO:0005384manganese ion transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41098ASPNIDRAFT_41098Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41098-T1ASPNIDRAFT_41098-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41098-T1.cdsASPNIDRAFT_41098-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41098-T1.exon2ASPNIDRAFT_41098-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41098-T1.exon1ASPNIDRAFT_41098-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR008217
DBxrefPFAM:PF01988
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1132190..1133149 -
Powered by Drupal