You are here

Home

ASPNIDRAFT_41458-T1, ASPNIDRAFT_41458-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41458-T1
Unique NameASPNIDRAFT_41458-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:25211..26141+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41458-T1 ID=ASPNIDRAFT_41458-T1|Name=ASPNIDRAFT_41458-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=931bp|location=Sequence derived from alignment at ACJE01000002.1:25211..26141+ (Aspergillus niger ATCC 1015)
ATGGAAAAAGATGTGGGCTACTCAAACCCATCAATGGATCAGGATGATAC
ATTGTTCGATTATGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTG
TGGATCCCAAGAGGGATGAACCTATTGCTGCACCAGTATTAGGGCTGGAT
GAAAAGGTCACAATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGA
GAGCCGGTGAGACTGACATCCGGCGTAGCGCTCTGAATACAGGCTTATTG
CTTCCTAGGTTACTGTCACACGCCGGAATACCAAAACTGCGTTCTACAGC
GAAGTCGAAACTGAAATTCAAAGGCAAAGGGCATGAGGTCTGCTAGAACC
GATTTGTATAGTCGCCGAGGGACCACTGCGTGGCTAACTGTTTTTCAAAG
TTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTATGGCTCGATGA
TTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTATGATAGAGAAAC
TGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAATGGATAGACGAG
GAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAA
ATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTATTGGGCATCTTG
AAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGGCACAGGCGCCC
CCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCT
ACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAA
TCATAGAAGAAGGTGCTCATGAAAATAATGATGATGATGATGATGATGAT
GAGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACAA
TAATCTGGCAGGATCAGATATAAGGGCTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:25211..26141+

>ASPNIDRAFT_41458-T1 ID=ASPNIDRAFT_41458-T1|Name=ASPNIDRAFT_41458-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2448bp|location=Sequence derived from alignment at ACJE01000002.1:25211..26141+ (Aspergillus niger ATCC 1015)
ATGGAAAAAGATGTGGGCTACTCAAACCCATCAATGGATCAGGATGATAC
ATTGTTCGATTATGATGCCGGCTTAGAGGGCACATTGCAAGATATAGCTG
TGGATCCCAAGAGGGATGAACCTATTGCTGCACCAGTATTAGGGCTGGAT
GAAAAGGTCACAATCACTAAGCAGCGACGATTTACAGTCAAGTTGGATGA
GAGCCGGTTACTGTCACACGCCGGAATACCAAAACTGCGTTCTACAGCGA
AGTCGAAACTGAAATTCAAAGGCAAAGGGCATGAGTTTTCGGATGCCGCT
CGACTCTTAAATTTTTATCAACTATGGCTCGATGATTTGTTCCCTCGTGC
GAAGTTCGCCGATGGATTGGCTATGATAGAGAAACTGGGTCACTCGAAAC
GCTTGCAGACGATGCGAAGAGAATGGATAGACGAGGAAAAGCCGAGACTT
TCCGCAGCTGACTCTGAAGATGCGCAACAAGCGAAATCTTCGAGCCCACA
TACCCGTGACAATAGTATGCCTATTGGGCATCTTGAAAAAGCCAACGCTA
TCATAGGCCGAGGAGATAACGTGGCACAGGCGCCCCCAACACAGGGCCTT
GGAGAGCCATCTTCACTTCTGCTAGGAGGCATTCTACAACAGGAGGATTT
GTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAAATCATAGAAGAAGGTG
CTCATGAAAATAATGATGATGATGATGATGATGATGAGCTGGAAGCACTT
CTTCGGGAGCACGAGGATGGTTTTATTGGTAACAATAATCTGGCAGGATC
AGATATAAGGGCTTGAATGGAAAAAGATGTGGGCTACTCAAACCCATCAA
TGGATCAGGATGATACATTGTTCGATTATGATGCCGGCTTAGAGGGCACA
TTGCAAGATATAGCTGTGGATCCCAAGAGGGATGAACCTATTGCTGCACC
AGTATTAGGGCTGGATGAAAAGGTCACAATCACTAAGCAGCGACGATTTA
CAGTCAAGTTGGATGAGAGCCGGTTACTGTCACACGCCGGAATACCAAAA
CTGCGTTCTACAGCGAAGTCGAAACTGAAATTCAAAGGCAAAGGGCATGA
GTTTTCGGATGCCGCTCGACTCTTAAATTTTTATCAACTATGGCTCGATG
ATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATTGGCTATGATAGAGAAA
CTGGGTCACTCGAAACGCTTGCAGACGATGCGAAGAGAATGGATAGACGA
GGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAAGATGCGCAACAAGCGA
AATCTTCGAGCCCACATACCCGTGACAATAGTATGCCTATTGGGCATCTT
GAAAAAGCCAACGCTATCATAGGCCGAGGAGATAACGTGGCACAGGCGCC
CCCAACACAGGGCCTTGGAGAGCCATCTTCACTTCTGCTAGGAGGCATTC
TACAACAGGAGGATTTGTTTGTGTCTGATGATGAAAGTGTTCCAAGGGAA
ATCATAGAAGAAGGTGCTCATGAAAATAATGATGATGATGATGATGATGA
TGAGCTGGAAGCACTTCTTCGGGAGCACGAGGATGGTTTTATTGGTAACA
ATAATCTGGCAGGATCAGATATAAGGGCTTGAATGGAAAAAGATGTGGGC
TACTCAAACCCATCAATGGATCAGGATGATACATTGTTCGATTATGATGC
CGGCTTAGAGGGCACATTGCAAGATATAGCTGTGGATCCCAAGAGGGATG
AACCTATTGCTGCACCAGTATTAGGGCTGGATGAAAAGGTCACAATCACT
AAGCAGCGACGATTTACAGTCAAGTTGGATGAGAGCCGGTTACTGTCACA
CGCCGGAATACCAAAACTGCGTTCTACAGCGAAGTCGAAACTGAAATTCA
AAGGCAAAGGGCATGAGTTTTCGGATGCCGCTCGACTCTTAAATTTTTAT
CAACTATGGCTCGATGATTTGTTCCCTCGTGCGAAGTTCGCCGATGGATT
GGCTATGATAGAGAAACTGGGTCACTCGAAACGCTTGCAGACGATGCGAA
GAGAATGGATAGACGAGGAAAAGCCGAGACTTTCCGCAGCTGACTCTGAA
GATGCGCAACAAGCGAAATCTTCGAGCCCACATACCCGTGACAATAGTAT
GCCTATTGGGCATCTTGAAAAAGCCAACGCTATCATAGGCCGAGGAGATA
ACGTGGCACAGGCGCCCCCAACACAGGGCCTTGGAGAGCCATCTTCACTT
CTGCTAGGAGGCATTCTACAACAGGAGGATTTGTTTGTGTCTGATGATGA
AAGTGTTCCAAGGGAAATCATAGAAGAAGGTGCTCATGAAAATAATGATG
ATGATGATGATGATGATGAGCTGGAAGCACTTCTTCGGGAGCACGAGGAT
GGTTTTATTGGTAACAATAATCTGGCAGGATCAGATATAAGGGCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006974cellular response to DNA damage stimulus
GO:0048478replication fork protection
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41458ASPNIDRAFT_41458Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41458-T1.exon1ASPNIDRAFT_41458-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41458-T1.exon2ASPNIDRAFT_41458-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41458-T1.exon3ASPNIDRAFT_41458-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41458-T1.cdsASPNIDRAFT_41458-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41458-T1ASPNIDRAFT_41458-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012923
DBxrefPFAM:PF07962
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:25211..26141 +
Powered by Drupal