You are here

Home

ASPNIDRAFT_41492-T1, ASPNIDRAFT_41492-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41492-T1
Unique NameASPNIDRAFT_41492-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:123431..124861+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41492-T1 ID=ASPNIDRAFT_41492-T1|Name=ASPNIDRAFT_41492-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1431bp|location=Sequence derived from alignment at ACJE01000002.1:123431..124861+ (Aspergillus niger ATCC 1015)
ATGCTGTCCGAACGCCAGGCAGCATCTGGCATTCTGGGCTGCCCGGTTGA
AGTATTAGGCCTGATCTTCGAGATCCTTCCGCCGGCTGAACTGCGTGTGC
TTAGCATTGTCAATAAAGAGCTGCGCGCCCGAGTTGAGCCATTCCTCTAC
GCAAACATCCAGTGGCTTTGGCGCGAAGCTTCTTCGCCTCCCCCGATCAC
TCAACTCTTACGCACAATTACGTGCAAGCCGCAATTGGCTACTTACATCA
CAAATGTTCACTTGGACGGCATGAATATCAAAGGTCGGATGACGGCAGGC
CCTCCCAAGATACTCATTTCCAGTTCCGAGTTGACCGAATACACTGCATT
CATCCAAGGGACTGGGGTGCCCTACAGCAATCTCTGGATATGTGAATTAC
ACCAGGGTACGATTGATGCTCTCCTTGCCCTTCTGGTAGCACAACTTTCA
AATCTCAGGTGCTTATACTTGGGCCCGATTTACACTAGAGAAGATCAGGT
TCTCGGAATGATCCTCAACTCAGCCTTATGCAGACCTATGGACTATAGGC
TACCTACCTTTCAGCATCTCCGAGATGTGTCTTTCCACCGTGCTGTGGGC
GACGACGGCACGAGGCCCAAAATGACACCCCAAGATAGAGCCAAGAACAC
CGCCAATGTCTTGCCATTGTTTTATCTGCCGAATATCCGAAGCATGTCCG
TCACTGTTGAGAACCCTGATGTATTCACATGGCCTGCAGCGCACTTACCT
GACCCTTCCAAACTTACCTCGCTTGACTTGACTGCGGTACGGGAAGCCTA
CCTCGGTGACTTGTTGTCAGTCATGCCATATCTCAAAACCCTTCGCTGGG
CCTGGTATTACGACTATGGCGTCGAGGATGACTTCGTTTCGCCTACCGTC
GATCTTGATAGGATCGCGGCCGCAGTATCTCGTGTTCGAGGCACTCTAAT
GGATTTAACAATCTCAGCTGATGCCCCAATCGGAGGCAATGAGCAGTTCC
ATCCCGCTGTTAAGATGGAGGGCTCGCTGCGTGCAATGGTAGAGTTCGAC
GAGCTCAAGAGACTTCGGATTCCCCTGGCATTCCTCGTGGGGTTTGTTGA
AGACACAACGAAAAGATTGCAGGACGTGGTCCCGAGGAATATCGAGTTTC
TAACCATTACGGATGAGCTGGGGCTACAAAATGACGGTGGTGATTATAAT
AGTGATTGGCCGATCTACGAATGGACAGATACTGCTGTTTTGACCTTGCT
TCGGACATGGCTGAGGGGTTGGAAATCTTGCACGCCCCAGCTTCGTGGCA
TTTCTGTATTGTTCGACTATATAGACACCAATATTGGGGAATGGCCCCCT
GAACTGAGGCACCAGTTCATGGAGCTAGGTGCTCAAGCCGAAGTCCACCT
CGAGTTAATCGAGTGGAAGCGCGACTGGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:123431..124861+

>ASPNIDRAFT_41492-T1 ID=ASPNIDRAFT_41492-T1|Name=ASPNIDRAFT_41492-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1431bp|location=Sequence derived from alignment at ACJE01000002.1:123431..124861+ (Aspergillus niger ATCC 1015)
ATGCTGTCCGAACGCCAGGCAGCATCTGGCATTCTGGGCTGCCCGGTTGA
AGTATTAGGCCTGATCTTCGAGATCCTTCCGCCGGCTGAACTGCGTGTGC
TTAGCATTGTCAATAAAGAGCTGCGCGCCCGAGTTGAGCCATTCCTCTAC
GCAAACATCCAGTGGCTTTGGCGCGAAGCTTCTTCGCCTCCCCCGATCAC
TCAACTCTTACGCACAATTACGTGCAAGCCGCAATTGGCTACTTACATCA
CAAATGTTCACTTGGACGGCATGAATATCAAAGGTCGGATGACGGCAGGC
CCTCCCAAGATACTCATTTCCAGTTCCGAGTTGACCGAATACACTGCATT
CATCCAAGGGACTGGGGTGCCCTACAGCAATCTCTGGATATGTGAATTAC
ACCAGGGTACGATTGATGCTCTCCTTGCCCTTCTGGTAGCACAACTTTCA
AATCTCAGGTGCTTATACTTGGGCCCGATTTACACTAGAGAAGATCAGGT
TCTCGGAATGATCCTCAACTCAGCCTTATGCAGACCTATGGACTATAGGC
TACCTACCTTTCAGCATCTCCGAGATGTGTCTTTCCACCGTGCTGTGGGC
GACGACGGCACGAGGCCCAAAATGACACCCCAAGATAGAGCCAAGAACAC
CGCCAATGTCTTGCCATTGTTTTATCTGCCGAATATCCGAAGCATGTCCG
TCACTGTTGAGAACCCTGATGTATTCACATGGCCTGCAGCGCACTTACCT
GACCCTTCCAAACTTACCTCGCTTGACTTGACTGCGGTACGGGAAGCCTA
CCTCGGTGACTTGTTGTCAGTCATGCCATATCTCAAAACCCTTCGCTGGG
CCTGGTATTACGACTATGGCGTCGAGGATGACTTCGTTTCGCCTACCGTC
GATCTTGATAGGATCGCGGCCGCAGTATCTCGTGTTCGAGGCACTCTAAT
GGATTTAACAATCTCAGCTGATGCCCCAATCGGAGGCAATGAGCAGTTCC
ATCCCGCTGTTAAGATGGAGGGCTCGCTGCGTGCAATGGTAGAGTTCGAC
GAGCTCAAGAGACTTCGGATTCCCCTGGCATTCCTCGTGGGGTTTGTTGA
AGACACAACGAAAAGATTGCAGGACGTGGTCCCGAGGAATATCGAGTTTC
TAACCATTACGGATGAGCTGGGGCTACAAAATGACGGTGGTGATTATAAT
AGTGATTGGCCGATCTACGAATGGACAGATACTGCTGTTTTGACCTTGCT
TCGGACATGGCTGAGGGGTTGGAAATCTTGCACGCCCCAGCTTCGTGGCA
TTTCTGTATTGTTCGACTATATAGACACCAATATTGGGGAATGGCCCCCT
GAACTGAGGCACCAGTTCATGGAGCTAGGTGCTCAAGCCGAAGTCCACCT
CGAGTTAATCGAGTGGAAGCGCGACTGGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41492ASPNIDRAFT_41492Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41492-T1.exon1ASPNIDRAFT_41492-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41492-T1.cdsASPNIDRAFT_41492-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41492-T1ASPNIDRAFT_41492-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001810
DBxrefInterPro:IPR032675
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:123431..124861 +
Powered by Drupal