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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:701822..703974+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_41686-T1 ID=ASPNIDRAFT_41686-T1|Name=ASPNIDRAFT_41686-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2153bp|location=Sequence derived from alignment at ACJE01000002.1:701822..703974+ (Aspergillus niger ATCC 1015)
ATGCCTTCTTCCTCGAGTACAGCCCGTGCAAGCACTTCCTGCCGTCGCTG
CCACCGACGGAAGAAGCGCTGCGACCGTACACTTCCACAATGTGAGACCT
GTATCCATGCCCAGGTAGAATGCAGCTTTCTTGATGATGATCGACAAGTC
GGAACATATCCAATCGCGTAAGTTTGGTGGCAGTAACATGAGTTCATTGA
CTTATTCCAGAGTTTGAAGCTACGTCCAAGGGCTCGAATGTCGCGTCAAG
GAGCTTGAAAAGCAACTTTCCGCAGCCCTAGCATCAACACCATACCCTAA
CCTCCAACTTGATCAGGATTTCGACCAGCCAGTAATCAACTTCGCGACAC
CTCCGGACACAGACAATAGCGACACCTATCCCATAGCGACACCTCCATCT
CATAACCGATCGGACTTTCTGGTCGATGAGCTCAAGCGACTGTCCCTTGA
AGCAGCAGCAGAGCGACATCTTGGTTCCTCTTCAGGGCTATCCTTCGCCA
AGTTAACCCAGGCAGTCCTCCGACGGCTATCCCCCGACAAAGCCGAGTTT
GTATTCGATGATACCCCAGACGAGTCGCCAGAGCAATACGGTAAACCTTT
CTCAGACCCTCTACTCGATGCTTCAACTTCCCTCTGGGAACTGAACAACT
CGTTCTCCTCACCATGCCTCTTCAACCAACTTCCACTGTCACACGTCATG
GAAGACGAGACAACGCTGGCCGATCTGCAATTACCCGACAGAGCACATGT
CGAATACTTAATGGAGTTCTACTTCGCACATTCCCACACACTATACCCTA
TCATCCGCCAGACTGAGTTCACCTCCGTAATATGGCGAGTATACAACAAT
CCACAAGACCCTCTGGCAGGGTCCCCACTATGGATGTTTCGCATCTGGAT
GGTTCTGGCCATTGGGACGACGACACACTGTTCCGTAACCCTGGGAGATG
AATCCGAGTCTGTGCTGTACTACAACAAGGCCATGGGGTATTTCGAGGAT
GCGCTTGGACTAGGCGATATGGTATGTCCACTTCCGATTAGGTAGACTGG
GACAACTGACTAACGACTCAGGCCGCGCTAGAGGTCATGATGCTGCAAGT
CTCATATTCATTCTTCAACCAAGTCGGACCAAGTACGTACCCCCGGATTC
CGATATATTCTCTACTGATTAAATAAAAGACACATTCTTCCTTGTCGGCG
TTGCCGCCCGCATGGCCATCGGGTTAGGCCTACACAGCTCCTCAAGCTAC
GCCAATCTCCCATCTGACGTGGTCGAGTACCGCAAGCGGATCTTCTTCTC
TCTATACATGATGGACAGGTACCTCTCCCATATACCCACACCCTATCCTT
TATCCACCCTAATAAGTATCAATAGAGTAGTATCCATAGCCCTAGGCCGC
CCCTTCGCCATCCACGACGCTGACATTGACGTCGAGGTAGCGCCTCCCCC
CAAAGATTCATCTCCTATAAACCGATCTAATACACAACTACAGCCCTTCA
CCGACACCACCACAACAGACGACCTAACCCACACAACCAACCTCTCCATC
CCACTACACATCCTCTCCCTGCGCCGCATCGCCAGTGAAATCACGACAGC
ACTCCACTCCCCAACCAACACACACAACTCAGACCGCCAGACAACCCTCC
AAACTCTACACAAGAAGCTCCTCCACTGGCGACGTACCATGCCTTTCCCA
CTCCCACCAACCCCGTCGCCAATCCCACATCTAACCAGCGCCTGGTTCGA
TCTGAACTACTACACGCACATGACGATGCTATACCGGCCATCTCCTCTCT
TTCCGTCTCTCGACGAACAGAAAGTGAAGGTGTTAGCGACAGCTGCGGCA
ATGGCTATTCGGCAGGCGATGAATCTGCATCGGCAGGGACGGTTCGCGTA
TAACTGGTTGAATCTGTTAGGGGTGTTTCAGAGTGCGGTGGCATTGATGT
ATGCTACGCTGGCGCGGCCGGATGAGTTGGGGGTTGTGGTTCGGGAGACT
AAGGTGGTGGAGGATTTGGGGCTGGTGGTGGAGTTGTTGAGGGTTTTTGG
GAGGAAATTTGGGGTTGCGGGGAGGTTGGAGAGGATTGTAGGGGTAGTGG
TGGGGAGGTTGGGGGAGTTTTGTGAGGGGGGTAGGGTTGGTGTGATGGTA
TGA back to topCoding sequence (CDS) from alignment at ACJE01000002.1:701822..703974+ >ASPNIDRAFT_41686-T1 ID=ASPNIDRAFT_41686-T1|Name=ASPNIDRAFT_41686-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=8016bp|location=Sequence derived from alignment at ACJE01000002.1:701822..703974+ (Aspergillus niger ATCC 1015)
ATGCCTTCTTCCTCGAGTACAGCCCGTGCAAGCACTTCCTGCCGTCGCTG
CCACCGACGGAAGAAGCGCTGCGACCGTACACTTCCACAATGTGAGACCT
GTATCCATGCCCAGGTAGAATGCAGCTTTCTTGATGATGATCGACAAGTC
GGAACATATCCAATCGCCTACGTCCAAGGGCTCGAATGTCGCGTCAAGGA
GCTTGAAAAGCAACTTTCCGCAGCCCTAGCATCAACACCATACCCTAACC
TCCAACTTGATCAGGATTTCGACCAGCCAGTAATCAACTTCGCGACACCT
CCGGACACAGACAATAGCGACACCTATCCCATAGCGACACCTCCATCTCA
TAACCGATCGGACTTTCTGGTCGATGAGCTCAAGCGACTGTCCCTTGAAG
CAGCAGCAGAGCGACATCTTGGTTCCTCTTCAGGGCTATCCTTCGCCAAG
TTAACCCAGGCAGTCCTCCGACGGCTATCCCCCGACAAAGCCGAGTTTGT
ATTCGATGATACCCCAGACGAGTCGCCAGAGCAATACGGTAAACCTTTCT
CAGACCCTCTACTCGATGCTTCAACTTCCCTCTGGGAACTGAACAACTCG
TTCTCCTCACCATGCCTCTTCAACCAACTTCCACTGTCACACGTCATGGA
AGACGAGACAACGCTGGCCGATCTGCAATTACCCGACAGAGCACATGTCG
AATACTTAATGGAGTTCTACTTCGCACATTCCCACACACTATACCCTATC
ATCCGCCAGACTGAGTTCACCTCCGTAATATGGCGAGTATACAACAATCC
ACAAGACCCTCTGGCAGGGTCCCCACTATGGATGTTTCGCATCTGGATGG
TTCTGGCCATTGGGACGACGACACACTGTTCCGTAACCCTGGGAGATGAA
TCCGAGTCTGTGCTGTACTACAACAAGGCCATGGGGTATTTCGAGGATGC
GCTTGGACTAGGCGATATGGCCGCGCTAGAGGTCATGATGCTGCAAGTCT
CATATTCATTCTTCAACCAAGTCGGACCAAACACATTCTTCCTTGTCGGC
GTTGCCGCCCGCATGGCCATCGGGTTAGGCCTACACAGCTCCTCAAGCTA
CGCCAATCTCCCATCTGACGTGGTCGAGTACCGCAAGCGGATCTTCTTCT
CTCTATACATGATGGACAGGTACCTCTCCCATATACCCACACCCTATCCT
TTATCCACCCTAATAAGTATCAATAGAGTAGTATCCATAGCCCTAGGCCG
CCCCTTCGCCATCCACGACGCTGACATTGACGTCGAGGTAGCGCCTCCCC
CCAAAGATTCATCTCCTATAAACCGATCTAATACACAACTACAGCCCTTC
ACCGACACCACCACAACAGACGACCTAACCCACACAACCAACCTCTCCAT
CCCACTACACATCCTCTCCCTGCGCCGCATCGCCAGTGAAATCACGACAG
CACTCCACTCCCCAACCAACACACACAACTCAGACCGCCAGACAACCCTC
CAAACTCTACACAAGAAGCTCCTCCACTGGCGACGTACCATGCCTTTCCC
ACTCCCACCAACCCCGTCGCCAATCCCACATCTAACCAGCGCCTGGTTCG
ATCTGAACTACTACACGCACATGACGATGCTATACCGGCCATCTCCTCTC
TTTCCGTCTCTCGACGAACAGAAAGTGAAGGTGTTAGCGACAGCTGCGGC
AATGGCTATTCGGCAGGCGATGAATCTGCATCGGCAGGGACGGTTCGCGT
ATAACTGGTTGAATCTGTTAGGGGTGTTTCAGAGTGCGGTGGCATTGATG
TATGCTACGCTGGCGCGGCCGGATGAGTTGGGGGTTGTGGTTCGGGAGAC
TAAGGTGGTGGAGGATTTGGGGCTGGTGGTGGAGTTGTTGAGGGTTTTTG
GGAGGAAATTTGGGGTTGCGGGGAGGTTGGAGAGGATTGTAGGGGTAGTG
GTGGGGAGGTTGGGGGAGTTTTGTGAGGGGGGTAGGGTTGGTGTGATGGT
ATGAATGCCTTCTTCCTCGAGTACAGCCCGTGCAAGCACTTCCTGCCGTC
GCTGCCACCGACGGAAGAAGCGCTGCGACCGTACACTTCCACAATGTGAG
ACCTGTATCCATGCCCAGGTAGAATGCAGCTTTCTTGATGATGATCGACA
AGTCGGAACATATCCAATCGCCTACGTCCAAGGGCTCGAATGTCGCGTCA
AGGAGCTTGAAAAGCAACTTTCCGCAGCCCTAGCATCAACACCATACCCT
AACCTCCAACTTGATCAGGATTTCGACCAGCCAGTAATCAACTTCGCGAC
ACCTCCGGACACAGACAATAGCGACACCTATCCCATAGCGACACCTCCAT
CTCATAACCGATCGGACTTTCTGGTCGATGAGCTCAAGCGACTGTCCCTT
GAAGCAGCAGCAGAGCGACATCTTGGTTCCTCTTCAGGGCTATCCTTCGC
CAAGTTAACCCAGGCAGTCCTCCGACGGCTATCCCCCGACAAAGCCGAGT
TTGTATTCGATGATACCCCAGACGAGTCGCCAGAGCAATACGGTAAACCT
TTCTCAGACCCTCTACTCGATGCTTCAACTTCCCTCTGGGAACTGAACAA
CTCGTTCTCCTCACCATGCCTCTTCAACCAACTTCCACTGTCACACGTCA
TGGAAGACGAGACAACGCTGGCCGATCTGCAATTACCCGACAGAGCACAT
GTCGAATACTTAATGGAGTTCTACTTCGCACATTCCCACACACTATACCC
TATCATCCGCCAGACTGAGTTCACCTCCGTAATATGGCGAGTATACAACA
ATCCACAAGACCCTCTGGCAGGGTCCCCACTATGGATGTTTCGCATCTGG
ATGGTTCTGGCCATTGGGACGACGACACACTGTTCCGTAACCCTGGGAGA
TGAATCCGAGTCTGTGCTGTACTACAACAAGGCCATGGGGTATTTCGAGG
ATGCGCTTGGACTAGGCGATATGGCCGCGCTAGAGGTCATGATGCTGCAA
GTCTCATATTCATTCTTCAACCAAGTCGGACCAAACACATTCTTCCTTGT
CGGCGTTGCCGCCCGCATGGCCATCGGGTTAGGCCTACACAGCTCCTCAA
GCTACGCCAATCTCCCATCTGACGTGGTCGAGTACCGCAAGCGGATCTTC
TTCTCTCTATACATGATGGACAGGTACCTCTCCCATATACCCACACCCTA
TCCTTTATCCACCCTAATAAGTATCAATAGAGTAGTATCCATAGCCCTAG
GCCGCCCCTTCGCCATCCACGACGCTGACATTGACGTCGAGGTAGCGCCT
CCCCCCAAAGATTCATCTCCTATAAACCGATCTAATACACAACTACAGCC
CTTCACCGACACCACCACAACAGACGACCTAACCCACACAACCAACCTCT
CCATCCCACTACACATCCTCTCCCTGCGCCGCATCGCCAGTGAAATCACG
ACAGCACTCCACTCCCCAACCAACACACACAACTCAGACCGCCAGACAAC
CCTCCAAACTCTACACAAGAAGCTCCTCCACTGGCGACGTACCATGCCTT
TCCCACTCCCACCAACCCCGTCGCCAATCCCACATCTAACCAGCGCCTGG
TTCGATCTGAACTACTACACGCACATGACGATGCTATACCGGCCATCTCC
TCTCTTTCCGTCTCTCGACGAACAGAAAGTGAAGGTGTTAGCGACAGCTG
CGGCAATGGCTATTCGGCAGGCGATGAATCTGCATCGGCAGGGACGGTTC
GCGTATAACTGGTTGAATCTGTTAGGGGTGTTTCAGAGTGCGGTGGCATT
GATGTATGCTACGCTGGCGCGGCCGGATGAGTTGGGGGTTGTGGTTCGGG
AGACTAAGGTGGTGGAGGATTTGGGGCTGGTGGTGGAGTTGTTGAGGGTT
TTTGGGAGGAAATTTGGGGTTGCGGGGAGGTTGGAGAGGATTGTAGGGGT
AGTGGTGGGGAGGTTGGGGGAGTTTTGTGAGGGGGGTAGGGTTGGTGTGA
TGGTATGAATGCCTTCTTCCTCGAGTACAGCCCGTGCAAGCACTTCCTGC
CGTCGCTGCCACCGACGGAAGAAGCGCTGCGACCGTACACTTCCACAATG
TGAGACCTGTATCCATGCCCAGGTAGAATGCAGCTTTCTTGATGATGATC
GACAAGTCGGAACATATCCAATCGCCTACGTCCAAGGGCTCGAATGTCGC
GTCAAGGAGCTTGAAAAGCAACTTTCCGCAGCCCTAGCATCAACACCATA
CCCTAACCTCCAACTTGATCAGGATTTCGACCAGCCAGTAATCAACTTCG
CGACACCTCCGGACACAGACAATAGCGACACCTATCCCATAGCGACACCT
CCATCTCATAACCGATCGGACTTTCTGGTCGATGAGCTCAAGCGACTGTC
CCTTGAAGCAGCAGCAGAGCGACATCTTGGTTCCTCTTCAGGGCTATCCT
TCGCCAAGTTAACCCAGGCAGTCCTCCGACGGCTATCCCCCGACAAAGCC
GAGTTTGTATTCGATGATACCCCAGACGAGTCGCCAGAGCAATACGGTAA
ACCTTTCTCAGACCCTCTACTCGATGCTTCAACTTCCCTCTGGGAACTGA
ACAACTCGTTCTCCTCACCATGCCTCTTCAACCAACTTCCACTGTCACAC
GTCATGGAAGACGAGACAACGCTGGCCGATCTGCAATTACCCGACAGAGC
ACATGTCGAATACTTAATGGAGTTCTACTTCGCACATTCCCACACACTAT
ACCCTATCATCCGCCAGACTGAGTTCACCTCCGTAATATGGCGAGTATAC
AACAATCCACAAGACCCTCTGGCAGGGTCCCCACTATGGATGTTTCGCAT
CTGGATGGTTCTGGCCATTGGGACGACGACACACTGTTCCGTAACCCTGG
GAGATGAATCCGAGTCTGTGCTGTACTACAACAAGGCCATGGGGTATTTC
GAGGATGCGCTTGGACTAGGCGATATGGCCGCGCTAGAGGTCATGATGCT
GCAAGTCTCATATTCATTCTTCAACCAAGTCGGACCAAACACATTCTTCC
TTGTCGGCGTTGCCGCCCGCATGGCCATCGGGTTAGGCCTACACAGCTCC
TCAAGCTACGCCAATCTCCCATCTGACGTGGTCGAGTACCGCAAGCGGAT
CTTCTTCTCTCTATACATGATGGACAGGTACCTCTCCCATATACCCACAC
CCTATCCTTTATCCACCCTAATAAGTATCAATAGAGTAGTATCCATAGCC
CTAGGCCGCCCCTTCGCCATCCACGACGCTGACATTGACGTCGAGGTAGC
GCCTCCCCCCAAAGATTCATCTCCTATAAACCGATCTAATACACAACTAC
AGCCCTTCACCGACACCACCACAACAGACGACCTAACCCACACAACCAAC
CTCTCCATCCCACTACACATCCTCTCCCTGCGCCGCATCGCCAGTGAAAT
CACGACAGCACTCCACTCCCCAACCAACACACACAACTCAGACCGCCAGA
CAACCCTCCAAACTCTACACAAGAAGCTCCTCCACTGGCGACGTACCATG
CCTTTCCCACTCCCACCAACCCCGTCGCCAATCCCACATCTAACCAGCGC
CTGGTTCGATCTGAACTACTACACGCACATGACGATGCTATACCGGCCAT
CTCCTCTCTTTCCGTCTCTCGACGAACAGAAAGTGAAGGTGTTAGCGACA
GCTGCGGCAATGGCTATTCGGCAGGCGATGAATCTGCATCGGCAGGGACG
GTTCGCGTATAACTGGTTGAATCTGTTAGGGGTGTTTCAGAGTGCGGTGG
CATTGATGTATGCTACGCTGGCGCGGCCGGATGAGTTGGGGGTTGTGGTT
CGGGAGACTAAGGTGGTGGAGGATTTGGGGCTGGTGGTGGAGTTGTTGAG
GGTTTTTGGGAGGAAATTTGGGGTTGCGGGGAGGTTGGAGAGGATTGTAG
GGGTAGTGGTGGGGAGGTTGGGGGAGTTTTGTGAGGGGGGTAGGGTTGGT
GTGATGGTATGAATGCCTTCTTCCTCGAGTACAGCCCGTGCAAGCACTTC
CTGCCGTCGCTGCCACCGACGGAAGAAGCGCTGCGACCGTACACTTCCAC
AATGTGAGACCTGTATCCATGCCCAGGTAGAATGCAGCTTTCTTGATGAT
GATCGACAAGTCGGAACATATCCAATCGCCTACGTCCAAGGGCTCGAATG
TCGCGTCAAGGAGCTTGAAAAGCAACTTTCCGCAGCCCTAGCATCAACAC
CATACCCTAACCTCCAACTTGATCAGGATTTCGACCAGCCAGTAATCAAC
TTCGCGACACCTCCGGACACAGACAATAGCGACACCTATCCCATAGCGAC
ACCTCCATCTCATAACCGATCGGACTTTCTGGTCGATGAGCTCAAGCGAC
TGTCCCTTGAAGCAGCAGCAGAGCGACATCTTGGTTCCTCTTCAGGGCTA
TCCTTCGCCAAGTTAACCCAGGCAGTCCTCCGACGGCTATCCCCCGACAA
AGCCGAGTTTGTATTCGATGATACCCCAGACGAGTCGCCAGAGCAATACG
GTAAACCTTTCTCAGACCCTCTACTCGATGCTTCAACTTCCCTCTGGGAA
CTGAACAACTCGTTCTCCTCACCATGCCTCTTCAACCAACTTCCACTGTC
ACACGTCATGGAAGACGAGACAACGCTGGCCGATCTGCAATTACCCGACA
GAGCACATGTCGAATACTTAATGGAGTTCTACTTCGCACATTCCCACACA
CTATACCCTATCATCCGCCAGACTGAGTTCACCTCCGTAATATGGCGAGT
ATACAACAATCCACAAGACCCTCTGGCAGGGTCCCCACTATGGATGTTTC
GCATCTGGATGGTTCTGGCCATTGGGACGACGACACACTGTTCCGTAACC
CTGGGAGATGAATCCGAGTCTGTGCTGTACTACAACAAGGCCATGGGGTA
TTTCGAGGATGCGCTTGGACTAGGCGATATGGCCGCGCTAGAGGTCATGA
TGCTGCAAGTCTCATATTCATTCTTCAACCAAGTCGGACCAAACACATTC
TTCCTTGTCGGCGTTGCCGCCCGCATGGCCATCGGGTTAGGCCTACACAG
CTCCTCAAGCTACGCCAATCTCCCATCTGACGTGGTCGAGTACCGCAAGC
GGATCTTCTTCTCTCTATACATGATGGACAGGTACCTCTCCCATATACCC
ACACCCTATCCTTTATCCACCCTAATAAGTATCAATAGAGTAGTATCCAT
AGCCCTAGGCCGCCCCTTCGCCATCCACGACGCTGACATTGACGTCGAGG
TAGCGCCTCCCCCCAAAGATTCATCTCCTATAAACCGATCTAATACACAA
CTACAGCCCTTCACCGACACCACCACAACAGACGACCTAACCCACACAAC
CAACCTCTCCATCCCACTACACATCCTCTCCCTGCGCCGCATCGCCAGTG
AAATCACGACAGCACTCCACTCCCCAACCAACACACACAACTCAGACCGC
CAGACAACCCTCCAAACTCTACACAAGAAGCTCCTCCACTGGCGACGTAC
CATGCCTTTCCCACTCCCACCAACCCCGTCGCCAATCCCACATCTAACCA
GCGCCTGGTTCGATCTGAACTACTACACGCACATGACGATGCTATACCGG
CCATCTCCTCTCTTTCCGTCTCTCGACGAACAGAAAGTGAAGGTGTTAGC
GACAGCTGCGGCAATGGCTATTCGGCAGGCGATGAATCTGCATCGGCAGG
GACGGTTCGCGTATAACTGGTTGAATCTGTTAGGGGTGTTTCAGAGTGCG
GTGGCATTGATGTATGCTACGCTGGCGCGGCCGGATGAGTTGGGGGTTGT
GGTTCGGGAGACTAAGGTGGTGGAGGATTTGGGGCTGGTGGTGGAGTTGT
TGAGGGTTTTTGGGAGGAAATTTGGGGTTGCGGGGAGGTTGGAGAGGATT
GTAGGGGTAGTGGTGGGGAGGTTGGGGGAGTTTTGTGAGGGGGGTAGGGT
TGGTGTGATGGTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:701822..703974 + |
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