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ASPNIDRAFT_41873-T1, ASPNIDRAFT_41873-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41873-T1
Unique NameASPNIDRAFT_41873-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1272473..1274422-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41873-T1 ID=ASPNIDRAFT_41873-T1|Name=ASPNIDRAFT_41873-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1950bp|location=Sequence derived from alignment at ACJE01000002.1:1272473..1274422- (Aspergillus niger ATCC 1015)
ATGTCTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCG
CCAGGGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCA
ACGCTCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAG
GCGCCCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAA
AATCATGGTCAGCGGCTTGGTGAGTACCCGTTATCTCTGCTCTATTGATA
AATGAACCGTTACTAACGTTTTTAGCCTTCCGATGTGAATGAGGCCAATA
TCAAGGTATGTTGATCGAAAGGCCTTGGCCTTGGGTTTCTATCGCCATGT
TTTCTTCTCGAAACCTTCGAGGCGCAACGGCTTTCGCGCGCGTTTCGATC
CTTGCCACGTTATCTATATATATTTTATATCACCGTCATGGATTCTTGGT
CTTCAGCATAGGCAGCAAACTCCATTGAAATCTTCGCATGCGGTAATTGC
ACGCTGGCACCCTGCGAGTCCGCCGAAGTTGGAGTTCTGCCGTAGTCTTG
CGAAAGGCGTGTTAGCTCGGGCGGATCTTCCAGCCATCCGCCTTTGAAGC
CACGCAGCAGACTGTGCCACAGATGATTGTTGAAACATACCATCTTTGAA
ACCAATCCGATTGGCTACACCCGTACAAAGTCCCACGTTTCGAGGTGTCG
GGCATCAGCGAGCGCATCAGCCTACCAGCAGTGACCGACTAGTTCGGCAG
GTGATCAACTGTCAAGCATCATGCTACCGGCGGTCGGTATGGGAAATGTT
TCAGTGTCGGGCAGGAAAGACGCATCTTCCCATATCACCTCCGTGAGACA
AATCGTGTCTTGTTCTCCCTATCATGGGCTGCTAGAGAGGTTCTAGGGAA
ACAGAACCATGGATTTGCCGCACACGTAGTCTTCGTGTTGTCTGTCCCCG
GGCGAAGGTTGCTGGCACACACAGCCCGTAGCTTTTGAGGCTAGCGCCTT
GTCTGGTTGCGAAAAGGTCGATGACGATTGCTGAGTGGGTTAGTTGGAAG
GGGGACACACGATACTGTGAAGGCTTTTGAGGGAGTTCATCGTTGTGGTT
CTTGGGATAAATGCTAGCAGCTCTGTGCTCTAGATATGACAGTGTCTCGG
TGTTCTGGAATGAACCGCCATGCACTGATTACTACTAACCGCCGCTGTGT
GCTCGCTGGTGCTCTTTGGTATCGCGTTTGAAGCCGGTGTCACGCGTTCT
TCGATGTTTTGGCTCTTCGGAATTCCTTGCGCCTTCTGCATTCTGTTGGC
TCGACATACTAATTTGGTCTCCTGGTATAGGAATACTTCACAAAGTCAGC
AGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAAACGGCACGAGCC
GTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACAGCTGCCAAGGCT
GCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACCCATGAAGGTGAG
CTTTTCACTAACCAATCACTATTCTTACGTATGGACACTAACAAATACTA
GATTGAGGTTGTCGTCGACGCCTCCCACGCTCCTGAGGTCTCTGCCCCTA
AGCCTCTGGGCGAGCGCGTTGCGTAAGTGTCCTCTTCCATTGTCTTGTAC
TGGGGAATCATGACTAACCGCGATGAAGACAAACCAAGCCCCAACCGAAG
CCCGCTACCGCTACCAAGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCG
TGCTCGTCGCCCTAACGGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGG
AGGAGCTTGATGCTGAGATGGTTGACTACTTCTCTACCACTAACGAGAAT
GCTGGCCCTGCGGAGGGCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCA
GCCTGCCGCTACCGGCGGCGAAGACCTCGGAATGGCGGAGATCTCCGTAA
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Coding sequence (CDS) from alignment at ACJE01000002.1:1272473..1274422-

>ASPNIDRAFT_41873-T1 ID=ASPNIDRAFT_41873-T1|Name=ASPNIDRAFT_41873-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3765bp|location=Sequence derived from alignment at ACJE01000002.1:1272473..1274422- (Aspergillus niger ATCC 1015)
ACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTGCTG
GTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGTAAC
CGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGACTA
CTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCCAAG
CAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGACCTC
GGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTCCCACGCTCC
TGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATACTTCAC
AAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAAACG
GCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACAGCT
GCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACCCAT
GAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTGCCAAGTTGG
ACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGCGCTCGCCGT
CGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCCTGTCCCAGT
CGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCGGAAAGGCTG
TTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATGGTCAGCGGC
TTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTGCTG
CTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGTGGT
AACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGTTGA
CTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATGCCC
AAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAAGAC
CTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTCCCACGC
TCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATACTT
CACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACCAAA
ACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGATACA
GCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAGACC
CATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTGCCAAGT
TGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGCGCTCGC
CGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCCTGTCCC
AGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCGGAAAGG
CTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATGGTCAGC
GGCTTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGGCTG
CTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGCCGT
GGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGATGGT
TGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCAATG
CCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGCGAA
GACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTCCCA
CGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGAATA
CTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACAACC
AAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCCGAT
ACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGGCAG
ACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTGCCA
AGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGCGCT
CGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCCTGT
CCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCGGAA
AGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATGGTC
AGCGGCTTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCAAGG
CTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAACGGC
CGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGAGAT
GGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGGGCA
ATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGCGGC
GAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGCCTC
CCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTGCGA
ATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCTACA
ACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAGCCC
GATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGATGG
CAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGTCTG
CCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAGGGC
GCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGCTCC
TGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGCCCG
GAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATCATG
GTCAGCGGCTTGACAAACCAAGCCCCAACCGAAGCCCGCTACCGCTACCA
AGGCTGCTGCTGGTGCCAAGGGCCGCAAGGGCCGTGCTCGTCGCCCTAAC
GGCCGTGGTAACCGCCCTAAGCCCAAGACTGTGGAGGAGCTTGATGCTGA
GATGGTTGACTACTTCTCTACCACTAACGAGAATGCTGGCCCTGCGGAGG
GCAATGCCCAAGCAAACGGTGCTGCCCCCCAGCAGCCTGCCGCTACCGGC
GGCGAAGACCTCGGAATGGCGGAGATCTCCATTGAGGTTGTCGTCGACGC
CTCCCACGCTCCTGAGGTCTCTGCCCCTAAGCCTCTGGGCGAGCGCGTTG
CGAATACTTCACAAAGTCAGCAGGTCCTGTCAAGCGAGTCATGCTCACCT
ACAACCAAAACGGCACGAGCCGTGGTATCGCCTCGATCGTGTTCAGCAAG
CCCGATACAGCTGCCAAGGCTGCTAAGGACTTGAATGGACTCCTTGTTGA
TGGCAGACCCATGAAGCCTTCCGATGTGAATGAGGCCAATATCAAGATGT
CTGCCAAGTTGGACAAGTCTCTCGACGAGATCCTCGTCAGCCGTCGCCAG
GGCGCTCGCCGTCGCGCTCGCCGCTCGGCTCCCAACAAGGCTGCCAACGC
TCCTGTCCCAGTCGGAGGTGTGAAGAAGACCACCAAGGCTGCCAAGGCGC
CCGGAAAGGCTGTTCAGAATGGACACCCGGTCTCTACGGAGAGCAAAATC
ATGGTCAGCGGCTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41873ASPNIDRAFT_41873Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41873-T1ASPNIDRAFT_41873-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41873-T1.cdsASPNIDRAFT_41873-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41873-T1.utr3p1ASPNIDRAFT_41873-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41873-T1.exon5ASPNIDRAFT_41873-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41873-T1.exon4ASPNIDRAFT_41873-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41873-T1.exon3ASPNIDRAFT_41873-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41873-T1.exon2ASPNIDRAFT_41873-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41873-T1.exon1ASPNIDRAFT_41873-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR025715
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
DBxrefPFAM:PF13865
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1272473..1274422 -
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