|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:1456448..1458712+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_41935-T1 ID=ASPNIDRAFT_41935-T1|Name=ASPNIDRAFT_41935-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2265bp|location=Sequence derived from alignment at ACJE01000002.1:1456448..1458712+ (Aspergillus niger ATCC 1015)
ATGTCCGCACCCATAACCAGGCGCAATCGAGCCCTCGCCTCATGTGAGCC
TTGCCGAGGGAGGAAAACTCGATGCGATCACGGTAAACCAGTCTGTGCCT
CCTGCCGGCGTCGTGGCTTCGACTCTCGGTGCTACTACCATCCTGCCCCT
TTGACTAAACATCGAAGTGCAAGTGCACAAAGACCGGCCGTGCCTACGCC
ATCCCAACCAACCATTGCTGCACCATCATGGAGCAGGTCCAGTGCAAAAT
ATCCCGGACGCTCTGCGGCTGGACCGCCCAAATTCCACACATGGCCTTTT
ATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGACACTCCCTTGCTGGG
CTCGCATGACAGCAAGGTTTATGAGGCCCACCTAGCCACCATGAAGGAGA
TTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAAAAGTGTCTCCATCAG
TACTACTCTGCTAAGCATAACTCACTTGTACCCAAACCAGTCGTTCTGCA
CCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGTCGGGCTATATCCTTG
GAGAAACGGGAGATCGAGTTGAGTTGGGCGATATTTCGCGGTTATCAGAA
TCTATACTGCTCTCTTCCTCTACAGAGGTTATCATCACCGCATCCTTGGA
CCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATCTTCGAGTCGAGA
CTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCTTCGGCTTTTTTCGTT
GACCGCGACGAGGGTAAGGATGCCGCATTTGTCCCAGACATGGTTTGGTA
TAGCACGGTGATCTTACGACTAGCTCGGGACCTTGCACCCCAGTCAAACG
ACGTCATTATATGGTTGGCGAATGAAAATGCACAGCTCAGGTCATTCCTT
GAAGGAGATACGAGTGAGCCCCTTTATACGTATCGTGAATGGGTGGATAC
TGATTGATTTCAGGCCTCGGTGTGTGGCGTCTGGTGGGCGATTTCTCGAC
CGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGACATATTCCCCCGAGA
GAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGCTTTGTGACTGAA
TATTACCTGGAGAAGATGTTTGGCCTGATATTCAATCTAACTCCTCGCAT
TACCTCTCGATATGTGGACGTCAAGCTCCCCCTTGATTTGTCAGATGACG
AACTTTTTGCCCAAACTCCCCAGGAACTAGAGGATGCAAAAAGTCGACTC
ACAAAAGATGGCTGGAACACAGATGGGAACCTTAGAGCAGCAACCTGGGC
TCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAGGGATTGTGGAATATC
GTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAACTCAGGTGTGTACAA
TCATTCGGACAAAGGTTGAACAGCACTAATGCTGTTTCAGAGAATTGTCT
TCTCGATGTCGTCAGACGTGGGATAACCTGCTTCCTCACCTAAGATATAC
TCAGGACTGTTGGGAATCCGACATGCCCCTGAGCACTTGTTATATGCATG
CGAAGGTTCATCTAGCCTATCTCCAAATCCATTTCCAGATATACCACCTT
CTTGGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCTGGACGTGTCTGC
AAACATTCTGGAGACAGTGGTTCGGTTGGGAAATACCCGCAGAATGGGCG
CCTTTACCTCGCATGATCTACCTGAAATCGTACGTGCTGCTCTACCCCTT
TACCGATCATCTTTTTTGTCATAGCTGACAGGGTGAAGCTTCTGGCCTGC
GGCTTGCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATACGCA
AGATCCTTCAAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGATTC
GCAATGTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCGCGG
GAAAGAAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAAGAA
ATTAGACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTCGGA
CAAGTCCTGATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCGACT
CCAATCACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGGAGA
TGGGGATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATCTCG
ATCTAATGTCTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGCGAC
TGGACAATGATGTAA back to topCoding sequence (CDS) from alignment at ACJE01000002.1:1456448..1458712+ >ASPNIDRAFT_41935-T1 ID=ASPNIDRAFT_41935-T1|Name=ASPNIDRAFT_41935-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7860bp|location=Sequence derived from alignment at ACJE01000002.1:1456448..1458712+ (Aspergillus niger ATCC 1015)
ATGTCCGCACCCATAACCAGGCGCAATCGAGCCCTCGCCTCATGTGAGCC
TTGCCGAGGGAGGAAAACTCGATGCGATCACGGTAAACCAGTCTGTGCCT
CCTGCCGGCGTCGTGGCTTCGACTCTCGGTGCTACTACCATCCTGCCCCT
TTGACTAAACATCGAAGTGCAAGTGCACAAAGACCGGCCGTGCCTACGCC
ATCCCAACCAACCATTGCTGCACCATCATGGAGCAGGTCCAGTGCAAAAT
ATCCCGGACGCTCTGCGGCTGGACCGCCCAAATTCCACACATGGCCTTTT
ATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGACACTCCCTTGCTGGG
CTCGCATGACAGCAAGGTTTATGAGGCCCACCTAGCCACCATGAAGGAGA
TTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAAAAGTGTCTCCATCAG
TACTACTCTGCTAAGCATAACTCACTTGTACCCAAACCAGTCGTTCTGCA
CCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGTCGGGCTATATCCTTG
GAGAAACGGGAGATCGAGTTGAGTTGGGCGATATTTCGCGGTTATCAGAA
TCTATACTGCTCTCTTCCTCTACAGAGGTTATCATCACCGCATCCTTGGA
CCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATCTTCGAGTCGAGA
CTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCTTCGGCTTTTTTCGTT
GACCGCGACGAGGGTAAGGATGCCGCATTTGTCCCAGACATGGTTTGGTA
TAGCACGGTGATCTTACGACTAGCTCGGGACCTTGCACCCCAGTCAAACG
ACGTCATTATATGGTTGGCGAATGAAAATGCACAGCTCAGGTCATTCCTT
GAAGGAGATACGAGCCTCGGTGTGTGGCGTCTGGTGGGCGATTTCTCGAC
CGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGACATATTCCCCCGAGA
GAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGCTTTGTGACTGAA
TATTACCTGGAGAAGATGTTTGGCCTGATATTCAATCTAACTCCTCGCAT
TACCTCTCGATATGTGGACGTCAAGCTCCCCCTTGATTTGTCAGATGACG
AACTTTTTGCCCAAACTCCCCAGGAACTAGAGGATGCAAAAAGTCGACTC
ACAAAAGATGGCTGGAACACAGATGGGAACCTTAGAGCAGCAACCTGGGC
TCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAGGGATTGTGGAATATC
GTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAACTCAGATATACCACC
TTCTTGGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCTGGACGTGTCT
GCAAACATTCTGGAGACAGTGGTTCGGTTGGGAAATACCCGCAGAATGGG
CGCCTTTACCTCGCATGATCTACCTGAAATCGGTGAAGCTTCTGGCCTGC
GGCTTGCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATACGCA
AGATCCTTCAAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGATTC
GCAATGTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCGCGG
GAAAGAAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAAGAA
ATTAGACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTCGGA
CAAGTCCTGATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCGACT
CCAATCACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGGAGA
TGGGGATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATCTCG
ATCTAATGTCTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGCGAC
TGGACAATGATGTAAATGTCCGCACCCATAACCAGGCGCAATCGAGCCCT
CGCCTCATGTGAGCCTTGCCGAGGGAGGAAAACTCGATGCGATCACGGTA
AACCAGTCTGTGCCTCCTGCCGGCGTCGTGGCTTCGACTCTCGGTGCTAC
TACCATCCTGCCCCTTTGACTAAACATCGAAGTGCAAGTGCACAAAGACC
GGCCGTGCCTACGCCATCCCAACCAACCATTGCTGCACCATCATGGAGCA
GGTCCAGTGCAAAATATCCCGGACGCTCTGCGGCTGGACCGCCCAAATTC
CACACATGGCCTTTTATGTCGACCGTCTCTGACAGTGGGACCTTGCCAGA
CACTCCCTTGCTGGGCTCGCATGACAGCAAGGTTTATGAGGCCCACCTAG
CCACCATGAAGGAGATTGTGTCTCAGTTGAGATACCTTCCTGTCATTGAA
AAGTGTCTCCATCAGTACTACTCTGCTAAGCATAACTCACTTGTACCCAA
ACCAGTCGTTCTGCACCTTCTCAAAGCGCTCCGTACAGATCTAGTATCGT
CGGGCTATATCCTTGGAGAAACGGGAGATCGAGTTGAGTTGGGCGATATT
TCGCGGTTATCAGAATCTATACTGCTCTCTTCCTCTACAGAGGTTATCAT
CACCGCATCCTTGGACCTGCATGGTTTCTTGGCCTTGTTCTGTGGCCCGA
ATCTTCGAGTCGAGACTCTCGGTCTTTTGTATACTATGGCTGCCCGTGCT
TCGGCTTTTTTCGTTGACCGCGACGAGGGTAAGGATGCCGCATTTGTCCC
AGACATGGTTTGGTATAGCACGGTGATCTTACGACTAGCTCGGGACCTTG
CACCCCAGTCAAACGACGTCATTATATGGTTGGCGAATGAAAATGCACAG
CTCAGGTCATTCCTTGAAGGAGATACGAGCCTCGGTGTGTGGCGTCTGGT
GGGCGATTTCTCGACCGATTTATTGGCTCTGGGCTTGAACAGGGAAGCGA
CATATTCCCCCGAGAGAACCCCGTTTTTTCTTGCAGAGTGCCGGAGGAGG
TGCTTTGTGACTGAATATTACCTGGAGAAGATGTTTGGCCTGATATTCAA
TCTAACTCCTCGCATTACCTCTCGATATGTGGACGTCAAGCTCCCCCTTG
ATTTGTCAGATGACGAACTTTTTGCCCAAACTCCCCAGGAACTAGAGGAT
GCAAAAAGTCGACTCACAAAAGATGGCTGGAACACAGATGGGAACCTTAG
AGCAGCAACCTGGGCTCGATTGCGCTATATTTTAAGTCAGTTTCGGGAAG
GGATTGTGGAATATCGTTTCCAAGCATCACAGGCAGCTGACCCTGCCCAA
CTCAGATATACCACCTTCTTGGAGAGAATAGCTCAACTCCGCTTCCCGAG
CTGCTGGACGTGTCTGCAAACATTCTGGAGACAGTGGTTCGGTTGGGAAA
TACCCGCAGAATGGGCGCCTTTACCTCGCATGATCTACCTGAAATCGGTG
AAGCTTCTGGCCTGCGGCTTGCCGTCCGCGGCAGTCCTCCTGACTACACT
AGAGAACAATACGCAAGATCCTTCAAGTACCCATCCGCCTGGCATAAAGA
CATCAGCCGTGATTCGCAATGTTTCCGTCCTTACGTCGCAACTCGAAAGG
GTGGCTAGTTCGCGGGAAAGAAATCAAGCCTTCTGCTTGCAGGCGGCAAA
GGCCTTCACGAAGAAATTAGACAAGATTCTGGACAGGCTTGCGACGTCAA
AGTTTCAGGCTCGGACAAGTCCTGATGTTGCGACAAGAGTTGACGTAATG
GACTCGATGCCGACTCCAATCACTGATCTTGACGCTTCTCTCACTGGTGG
AGAGAGTGCTGGAGATGGGGATAGAGAGATTGGTGCTTTCAATCTGGAGG
ACTACGAGAATCTCGATCTAATGTCTTGGGCGATCGATTTTGACCTTGGA
AACACGGCCAGCGACTGGACAATGATGTAAATGTCCGCACCCATAACCAG
GCGCAATCGAGCCCTCGCCTCATGTGAGCCTTGCCGAGGGAGGAAAACTC
GATGCGATCACGGTAAACCAGTCTGTGCCTCCTGCCGGCGTCGTGGCTTC
GACTCTCGGTGCTACTACCATCCTGCCCCTTTGACTAAACATCGAAGTGC
AAGTGCACAAAGACCGGCCGTGCCTACGCCATCCCAACCAACCATTGCTG
CACCATCATGGAGCAGGTCCAGTGCAAAATATCCCGGACGCTCTGCGGCT
GGACCGCCCAAATTCCACACATGGCCTTTTATGTCGACCGTCTCTGACAG
TGGGACCTTGCCAGACACTCCCTTGCTGGGCTCGCATGACAGCAAGGTTT
ATGAGGCCCACCTAGCCACCATGAAGGAGATTGTGTCTCAGTTGAGATAC
CTTCCTGTCATTGAAAAGTGTCTCCATCAGTACTACTCTGCTAAGCATAA
CTCACTTGTACCCAAACCAGTCGTTCTGCACCTTCTCAAAGCGCTCCGTA
CAGATCTAGTATCGTCGGGCTATATCCTTGGAGAAACGGGAGATCGAGTT
GAGTTGGGCGATATTTCGCGGTTATCAGAATCTATACTGCTCTCTTCCTC
TACAGAGGTTATCATCACCGCATCCTTGGACCTGCATGGTTTCTTGGCCT
TGTTCTGTGGCCCGAATCTTCGAGTCGAGACTCTCGGTCTTTTGTATACT
ATGGCTGCCCGTGCTTCGGCTTTTTTCGTTGACCGCGACGAGGGTAAGGA
TGCCGCATTTGTCCCAGACATGGTTTGGTATAGCACGGTGATCTTACGAC
TAGCTCGGGACCTTGCACCCCAGTCAAACGACGTCATTATATGGTTGGCG
AATGAAAATGCACAGCTCAGGTCATTCCTTGAAGGAGATACGAGCCTCGG
TGTGTGGCGTCTGGTGGGCGATTTCTCGACCGATTTATTGGCTCTGGGCT
TGAACAGGGAAGCGACATATTCCCCCGAGAGAACCCCGTTTTTTCTTGCA
GAGTGCCGGAGGAGGTGCTTTGTGACTGAATATTACCTGGAGAAGATGTT
TGGCCTGATATTCAATCTAACTCCTCGCATTACCTCTCGATATGTGGACG
TCAAGCTCCCCCTTGATTTGTCAGATGACGAACTTTTTGCCCAAACTCCC
CAGGAACTAGAGGATGCAAAAAGTCGACTCACAAAAGATGGCTGGAACAC
AGATGGGAACCTTAGAGCAGCAACCTGGGCTCGATTGCGCTATATTTTAA
GTCAGTTTCGGGAAGGGATTGTGGAATATCGTTTCCAAGCATCACAGGCA
GCTGACCCTGCCCAACTCAGATATACCACCTTCTTGGAGAGAATAGCTCA
ACTCCGCTTCCCGAGCTGCTGGACGTGTCTGCAAACATTCTGGAGACAGT
GGTTCGGTTGGGAAATACCCGCAGAATGGGCGCCTTTACCTCGCATGATC
TACCTGAAATCGGTGAAGCTTCTGGCCTGCGGCTTGCCGTCCGCGGCAGT
CCTCCTGACTACACTAGAGAACAATACGCAAGATCCTTCAAGTACCCATC
CGCCTGGCATAAAGACATCAGCCGTGATTCGCAATGTTTCCGTCCTTACG
TCGCAACTCGAAAGGGTGGCTAGTTCGCGGGAAAGAAATCAAGCCTTCTG
CTTGCAGGCGGCAAAGGCCTTCACGAAGAAATTAGACAAGATTCTGGACA
GGCTTGCGACGTCAAAGTTTCAGGCTCGGACAAGTCCTGATGTTGCGACA
AGAGTTGACGTAATGGACTCGATGCCGACTCCAATCACTGATCTTGACGC
TTCTCTCACTGGTGGAGAGAGTGCTGGAGATGGGGATAGAGAGATTGGTG
CTTTCAATCTGGAGGACTACGAGAATCTCGATCTAATGTCTTGGGCGATC
GATTTTGACCTTGGAAACACGGCCAGCGACTGGACAATGATGTAAATGTC
CGCACCCATAACCAGGCGCAATCGAGCCCTCGCCTCATGTGAGCCTTGCC
GAGGGAGGAAAACTCGATGCGATCACGGTAAACCAGTCTGTGCCTCCTGC
CGGCGTCGTGGCTTCGACTCTCGGTGCTACTACCATCCTGCCCCTTTGAC
TAAACATCGAAGTGCAAGTGCACAAAGACCGGCCGTGCCTACGCCATCCC
AACCAACCATTGCTGCACCATCATGGAGCAGGTCCAGTGCAAAATATCCC
GGACGCTCTGCGGCTGGACCGCCCAAATTCCACACATGGCCTTTTATGTC
GACCGTCTCTGACAGTGGGACCTTGCCAGACACTCCCTTGCTGGGCTCGC
ATGACAGCAAGGTTTATGAGGCCCACCTAGCCACCATGAAGGAGATTGTG
TCTCAGTTGAGATACCTTCCTGTCATTGAAAAGTGTCTCCATCAGTACTA
CTCTGCTAAGCATAACTCACTTGTACCCAAACCAGTCGTTCTGCACCTTC
TCAAAGCGCTCCGTACAGATCTAGTATCGTCGGGCTATATCCTTGGAGAA
ACGGGAGATCGAGTTGAGTTGGGCGATATTTCGCGGTTATCAGAATCTAT
ACTGCTCTCTTCCTCTACAGAGGTTATCATCACCGCATCCTTGGACCTGC
ATGGTTTCTTGGCCTTGTTCTGTGGCCCGAATCTTCGAGTCGAGACTCTC
GGTCTTTTGTATACTATGGCTGCCCGTGCTTCGGCTTTTTTCGTTGACCG
CGACGAGGGTAAGGATGCCGCATTTGTCCCAGACATGGTTTGGTATAGCA
CGGTGATCTTACGACTAGCTCGGGACCTTGCACCCCAGTCAAACGACGTC
ATTATATGGTTGGCGAATGAAAATGCACAGCTCAGGTCATTCCTTGAAGG
AGATACGAGCCTCGGTGTGTGGCGTCTGGTGGGCGATTTCTCGACCGATT
TATTGGCTCTGGGCTTGAACAGGGAAGCGACATATTCCCCCGAGAGAACC
CCGTTTTTTCTTGCAGAGTGCCGGAGGAGGTGCTTTGTGACTGAATATTA
CCTGGAGAAGATGTTTGGCCTGATATTCAATCTAACTCCTCGCATTACCT
CTCGATATGTGGACGTCAAGCTCCCCCTTGATTTGTCAGATGACGAACTT
TTTGCCCAAACTCCCCAGGAACTAGAGGATGCAAAAAGTCGACTCACAAA
AGATGGCTGGAACACAGATGGGAACCTTAGAGCAGCAACCTGGGCTCGAT
TGCGCTATATTTTAAGTCAGTTTCGGGAAGGGATTGTGGAATATCGTTTC
CAAGCATCACAGGCAGCTGACCCTGCCCAACTCAGATATACCACCTTCTT
GGAGAGAATAGCTCAACTCCGCTTCCCGAGCTGCTGGACGTGTCTGCAAA
CATTCTGGAGACAGTGGTTCGGTTGGGAAATACCCGCAGAATGGGCGCCT
TTACCTCGCATGATCTACCTGAAATCGGTGAAGCTTCTGGCCTGCGGCTT
GCCGTCCGCGGCAGTCCTCCTGACTACACTAGAGAACAATACGCAAGATC
CTTCAAGTACCCATCCGCCTGGCATAAAGACATCAGCCGTGATTCGCAAT
GTTTCCGTCCTTACGTCGCAACTCGAAAGGGTGGCTAGTTCGCGGGAAAG
AAATCAAGCCTTCTGCTTGCAGGCGGCAAAGGCCTTCACGAAGAAATTAG
ACAAGATTCTGGACAGGCTTGCGACGTCAAAGTTTCAGGCTCGGACAAGT
CCTGATGTTGCGACAAGAGTTGACGTAATGGACTCGATGCCGACTCCAAT
CACTGATCTTGACGCTTCTCTCACTGGTGGAGAGAGTGCTGGAGATGGGG
ATAGAGAGATTGGTGCTTTCAATCTGGAGGACTACGAGAATCTCGATCTA
ATGTCTTGGGCGATCGATTTTGACCTTGGAAACACGGCCAGCGACTGGAC
AATGATGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:1456448..1458712 + |
|
