You are here

Home

ASPNIDRAFT_42240-T1, ASPNIDRAFT_42240-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42240-T1
Unique NameASPNIDRAFT_42240-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1026655..1027575+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42240-T1 ID=ASPNIDRAFT_42240-T1|Name=ASPNIDRAFT_42240-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=921bp|location=Sequence derived from alignment at ACJE01000006.1:1026655..1027575+ (Aspergillus niger ATCC 1015)
ATGGCATCCTATCTGATTACAGGTGCTTCGCGTGGCATTGGTCTCGCCAT
GGCTCGTACACTGGCTTCCAAACCCGCCAACGAAGTCTCTGTCATCTTTG
CCGCAGCACGCACCCAAACCGATGATCTAAAGCGACTAGTTGCGCAGTCT
TCCGGACGCATCCATCCTGTTTCTATGGATGTTGAAAGCAAGAATAGTAT
ACAGGCAGCAGTTGCGACCGTTGAACATGCATTGTCGGGGAAGGGCCTCG
ACGTCCTAATCAACAATGCGGGGATAATGCCCTCTACCCGGGGTGGTATT
GAAAATATGTGAGCTGTGATTGTCATGCTTTTATCAAATGCACCATTAAC
GCTTGGTAGGGATAACCTGGACACCGTCTTCCATACCAACGTTAGCAGTG
CCCATATGGTGACAAGTGCCTTCTTACCACTCCTCAAGAACGGAAACCAG
AAGAAAGTGATCAACATGTGTGTATTTATCTGTTTGGCCAGACTTGGCTT
ATTATGGTTCTGACGCAAATCAGATCAACAACACTTGGCTCGATCACGAT
GGCACCCCGATTCGCACTATTTCCAGTGCCAGCTTACAAAGTTAGCAAAG
CGGCACTCAATATGCTAACTGTGCAATATGCGCAGTCTTTTGCGGATCAA
GGCTTCACATTTCTTGCAATCTCACCAGGTGTACGTTTTCTATCCGTGTT
TCTTGACGCATTCATGTAGCTAACCGCTTCGGAAGTGGGTGAAGACAGAC
CTTGGGGGTGACGGGGCAGATATAACAGCCGAACAGAGTGTGCAAGGTCT
ATTGGATATTATAGTTCCGGCAACACATGCAGATAACGGGAAGTTCTTCA
ATATTCGCGTTCCAGGATGGGAGAAGGCAGAGGGTTTAAACCAATATGAT
GGGGCAGAGGTGCCGTGGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:1026655..1027575+

>ASPNIDRAFT_42240-T1 ID=ASPNIDRAFT_42240-T1|Name=ASPNIDRAFT_42240-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3036bp|location=Sequence derived from alignment at ACJE01000006.1:1026655..1027575+ (Aspergillus niger ATCC 1015)
ATGGCATCCTATCTGATTACAGGTGCTTCGCGTGGCATTGGTCTCGCCAT
GGCTCGTACACTGGCTTCCAAACCCGCCAACGAAGTCTCTGTCATCTTTG
CCGCAGCACGCACCCAAACCGATGATCTAAAGCGACTAGTTGCGCAGTCT
TCCGGACGCATCCATCCTGTTTCTATGGATGTTGAAAGCAAGAATAGTAT
ACAGGCAGCAGTTGCGACCGTTGAACATGCATTGTCGGGGAAGGGCCTCG
ACGTCCTAATCAACAATGCGGGGATAATGCCCTCTACCCGGGGTGGTATT
GAAAATATGGATAACCTGGACACCGTCTTCCATACCAACGTTAGCAGTGC
CCATATGGTGACAAGTGCCTTCTTACCACTCCTCAAGAACGGAAACCAGA
AGAAAGTGATCAACATATCAACAACACTTGGCTCGATCACGATGGCACCC
CGATTCGCACTATTTCCAGTGCCAGCTTACAAAGTTAGCAAAGCGGCACT
CAATATGCTAACTGTGCAATATGCGCAGTCTTTTGCGGATCAAGGCTTCA
CATTTCTTGCAATCTCACCAGGTTGGGTGAAGACAGACCTTGGGGGTGAC
GGGGCAGATATAACAGCCGAACAGAGTGTGCAAGGTCTATTGGATATTAT
AGTTCCGGCAACACATGCAGATAACGGGAAGTTCTTCAATATTCGCGTTC
CAGGATGGGAGAAGGCAGAGGGTTTAAACCAATATGATGGGGCAGAGGTG
CCGTGGTAAATGGCATCCTATCTGATTACAGGTGCTTCGCGTGGCATTGG
TCTCGCCATGGCTCGTACACTGGCTTCCAAACCCGCCAACGAAGTCTCTG
TCATCTTTGCCGCAGCACGCACCCAAACCGATGATCTAAAGCGACTAGTT
GCGCAGTCTTCCGGACGCATCCATCCTGTTTCTATGGATGTTGAAAGCAA
GAATAGTATACAGGCAGCAGTTGCGACCGTTGAACATGCATTGTCGGGGA
AGGGCCTCGACGTCCTAATCAACAATGCGGGGATAATGCCCTCTACCCGG
GGTGGTATTGAAAATATGGATAACCTGGACACCGTCTTCCATACCAACGT
TAGCAGTGCCCATATGGTGACAAGTGCCTTCTTACCACTCCTCAAGAACG
GAAACCAGAAGAAAGTGATCAACATATCAACAACACTTGGCTCGATCACG
ATGGCACCCCGATTCGCACTATTTCCAGTGCCAGCTTACAAAGTTAGCAA
AGCGGCACTCAATATGCTAACTGTGCAATATGCGCAGTCTTTTGCGGATC
AAGGCTTCACATTTCTTGCAATCTCACCAGGTTGGGTGAAGACAGACCTT
GGGGGTGACGGGGCAGATATAACAGCCGAACAGAGTGTGCAAGGTCTATT
GGATATTATAGTTCCGGCAACACATGCAGATAACGGGAAGTTCTTCAATA
TTCGCGTTCCAGGATGGGAGAAGGCAGAGGGTTTAAACCAATATGATGGG
GCAGAGGTGCCGTGGTAAATGGCATCCTATCTGATTACAGGTGCTTCGCG
TGGCATTGGTCTCGCCATGGCTCGTACACTGGCTTCCAAACCCGCCAACG
AAGTCTCTGTCATCTTTGCCGCAGCACGCACCCAAACCGATGATCTAAAG
CGACTAGTTGCGCAGTCTTCCGGACGCATCCATCCTGTTTCTATGGATGT
TGAAAGCAAGAATAGTATACAGGCAGCAGTTGCGACCGTTGAACATGCAT
TGTCGGGGAAGGGCCTCGACGTCCTAATCAACAATGCGGGGATAATGCCC
TCTACCCGGGGTGGTATTGAAAATATGGATAACCTGGACACCGTCTTCCA
TACCAACGTTAGCAGTGCCCATATGGTGACAAGTGCCTTCTTACCACTCC
TCAAGAACGGAAACCAGAAGAAAGTGATCAACATATCAACAACACTTGGC
TCGATCACGATGGCACCCCGATTCGCACTATTTCCAGTGCCAGCTTACAA
AGTTAGCAAAGCGGCACTCAATATGCTAACTGTGCAATATGCGCAGTCTT
TTGCGGATCAAGGCTTCACATTTCTTGCAATCTCACCAGGTTGGGTGAAG
ACAGACCTTGGGGGTGACGGGGCAGATATAACAGCCGAACAGAGTGTGCA
AGGTCTATTGGATATTATAGTTCCGGCAACACATGCAGATAACGGGAAGT
TCTTCAATATTCGCGTTCCAGGATGGGAGAAGGCAGAGGGTTTAAACCAA
TATGATGGGGCAGAGGTGCCGTGGTAAATGGCATCCTATCTGATTACAGG
TGCTTCGCGTGGCATTGGTCTCGCCATGGCTCGTACACTGGCTTCCAAAC
CCGCCAACGAAGTCTCTGTCATCTTTGCCGCAGCACGCACCCAAACCGAT
GATCTAAAGCGACTAGTTGCGCAGTCTTCCGGACGCATCCATCCTGTTTC
TATGGATGTTGAAAGCAAGAATAGTATACAGGCAGCAGTTGCGACCGTTG
AACATGCATTGTCGGGGAAGGGCCTCGACGTCCTAATCAACAATGCGGGG
ATAATGCCCTCTACCCGGGGTGGTATTGAAAATATGGATAACCTGGACAC
CGTCTTCCATACCAACGTTAGCAGTGCCCATATGGTGACAAGTGCCTTCT
TACCACTCCTCAAGAACGGAAACCAGAAGAAAGTGATCAACATATCAACA
ACACTTGGCTCGATCACGATGGCACCCCGATTCGCACTATTTCCAGTGCC
AGCTTACAAAGTTAGCAAAGCGGCACTCAATATGCTAACTGTGCAATATG
CGCAGTCTTTTGCGGATCAAGGCTTCACATTTCTTGCAATCTCACCAGGT
TGGGTGAAGACAGACCTTGGGGGTGACGGGGCAGATATAACAGCCGAACA
GAGTGTGCAAGGTCTATTGGATATTATAGTTCCGGCAACACATGCAGATA
ACGGGAAGTTCTTCAATATTCGCGTTCCAGGATGGGAGAAGGCAGAGGGT
TTAAACCAATATGATGGGGCAGAGGTGCCGTGGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42240ASPNIDRAFT_42240Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42240-T1.exon1ASPNIDRAFT_42240-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42240-T1.exon2ASPNIDRAFT_42240-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42240-T1.exon3ASPNIDRAFT_42240-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42240-T1.exon4ASPNIDRAFT_42240-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42240-T1.cdsASPNIDRAFT_42240-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42240-T1ASPNIDRAFT_42240-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1026655..1027575 +
Powered by Drupal