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ASPNIDRAFT_42345-T1, ASPNIDRAFT_42345-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42345-T1
Unique NameASPNIDRAFT_42345-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:718714..719777+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42345-T1 ID=ASPNIDRAFT_42345-T1|Name=ASPNIDRAFT_42345-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1064bp|location=Sequence derived from alignment at ACJE01000006.1:718714..719777+ (Aspergillus niger ATCC 1015)
ATGCAGAATGTACATGGAGTCAACGATATGCCCGACAGCAAACATGCGTG
TGCCCACTGTCGAAAACAAAAGTCTCGATGCCAAGGAGGACCGCCATGTA
ACAAGTGCTTGCGTCGCGGAATCCACTGTTCCCTGGAGCGGCGGGCGGAA
CCGCATCCGGCTGATCGCCCAGACCCTCCAAGGATGCTTCAACCCCCTCC
CGCCCAACCGGAGACAGAAGATTCCGACCAGGAAAGCCATTATATAGGCA
TATATTTCAACGTATTCCACCCCCGTTGGCCTTTTGTTCATCAAGGGTCA
TTCGGTAATCATGAGGCACCATTGCTTGTCAAGTCAATGCTTGTTCTTGG
TCTGTGGATGAGTAAACAGAGAAAAGCCCAATCAAAAGCCATTGAACTGC
ATAATGTCTTGGGCTTGGCCATACGTCAGCAGACTGTACGTAGGCAGATT
ACCCCTGTCTCTAGCTCTGTTCGCTAATGAAAAGACTGCAGGACGCATGG
GATGCCTCTATAGCAGATGCAACTAGTAACTGCAAATGGCCTATCTCGAC
ATATCAGGCTATATTGCTTCACATAATATTTGCGGGTCTATATAGGGGCG
GTGGGGAGCTCGACCTTGACCTGAAGCCTTCTCTTGCCCCAGCAGATGCC
GATCTCCTAGAAAGGCTTGTCGTAAGCTGCAAGAAGCTAGGAATGTTTCT
CTACCCAAACATACTGGAGCATTATTCCAACAGTATATTGCCTGGGTTTT
CATGGGTGAGTATTGAGGACGCTAAGAGATTTAATCTGGCTTTATTTAGA
GTCTGCAGGGCTTTCGGGATCTTAGACAAAGAGGAGGGTATAATTATACC
GGGAACCACAAGTGGGAGGCTCCGTGCATGCGACCTACAATTCCCGCCAC
CAAAGAATACTCCATTATGGAATGCTGTAACCAAAGATGAGTGGGAATCT
GCTGCTACAGCGGATATGGACCGCCATGGCATATATGATCCTCTGCCACA
GGAATGGATCTCAAACTCCGCAGACATCGTGGAACTTGTTGTCACTGGAT
TTCCCCTGGATTAG
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Coding sequence (CDS) from alignment at ACJE01000006.1:718714..719777+

>ASPNIDRAFT_42345-T1 ID=ASPNIDRAFT_42345-T1|Name=ASPNIDRAFT_42345-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2016bp|location=Sequence derived from alignment at ACJE01000006.1:718714..719777+ (Aspergillus niger ATCC 1015)
ATGCAGAATGTACATGGAGTCAACGATATGCCCGACAGCAAACATGCGTG
TGCCCACTGTCGAAAACAAAAGTCTCGATGCCAAGGAGGACCGCCATGTA
ACAAGTGCTTGCGTCGCGGAATCCACTGTTCCCTGGAGCGGCGGGCGGAA
CCGCATCCGGCTGATCGCCCAGACCCTCCAAGGATGCTTCAACCCCCTCC
CGCCCAACCGGAGACAGAAGATTCCGACCAGGAAAGCCATTATATAGGCA
TATATTTCAACGTATTCCACCCCCGTTGGCCTTTTGTTCATCAAGGGTCA
TTCGGTAATCATGAGGCACCATTGCTTGTCAAGTCAATGCTTGTTCTTGG
TCTGTGGATGAGTAAACAGAGAAAAGCCCAATCAAAAGCCATTGAACTGC
ATAATGTCTTGGGCTTGGCCATACGTCAGCAGACTGACGCATGGGATGCC
TCTATAGCAGATGCAACTAGTAACTGCAAATGGCCTATCTCGACATATCA
GGCTATATTGCTTCACATAATATTTGCGGGTCTATATAGGGGCGGTGGGG
AGCTCGACCTTGACCTGAAGCCTTCTCTTGCCCCAGCAGATGCCGATCTC
CTAGAAAGGCTTGTCGTAAGCTGCAAGAAGCTAGGAATGTTTCTCTACCC
AAACATACTGGAGCATTATTCCAACAGTATATTGCCTGGGTTTTCATGGG
TGAGTATTGAGGACGCTAAGAGATTTAATCTGGCTTTATTTAGAGTCTGC
AGGGCTTTCGGGATCTTAGACAAAGAGGAGGGTATAATTATACCGGGAAC
CACAAGTGGGAGGCTCCGTGCATGCGACCTACAATTCCCGCCACCAAAGA
ATACTCCATTATGGAATGCTGTAACCAAAGATGAGTGGGAATCTGCTGCT
ACAGCGGATATGGACCGCCATGGCATATATGATCCTCTGCCACAGGAATG
GATCTCAAACTCCGCAGACATCGTGGAACTTGTTGTCACTGGATTTCCCC
TGGATTAGATGCAGAATGTACATGGAGTCAACGATATGCCCGACAGCAAA
CATGCGTGTGCCCACTGTCGAAAACAAAAGTCTCGATGCCAAGGAGGACC
GCCATGTAACAAGTGCTTGCGTCGCGGAATCCACTGTTCCCTGGAGCGGC
GGGCGGAACCGCATCCGGCTGATCGCCCAGACCCTCCAAGGATGCTTCAA
CCCCCTCCCGCCCAACCGGAGACAGAAGATTCCGACCAGGAAAGCCATTA
TATAGGCATATATTTCAACGTATTCCACCCCCGTTGGCCTTTTGTTCATC
AAGGGTCATTCGGTAATCATGAGGCACCATTGCTTGTCAAGTCAATGCTT
GTTCTTGGTCTGTGGATGAGTAAACAGAGAAAAGCCCAATCAAAAGCCAT
TGAACTGCATAATGTCTTGGGCTTGGCCATACGTCAGCAGACTGACGCAT
GGGATGCCTCTATAGCAGATGCAACTAGTAACTGCAAATGGCCTATCTCG
ACATATCAGGCTATATTGCTTCACATAATATTTGCGGGTCTATATAGGGG
CGGTGGGGAGCTCGACCTTGACCTGAAGCCTTCTCTTGCCCCAGCAGATG
CCGATCTCCTAGAAAGGCTTGTCGTAAGCTGCAAGAAGCTAGGAATGTTT
CTCTACCCAAACATACTGGAGCATTATTCCAACAGTATATTGCCTGGGTT
TTCATGGGTGAGTATTGAGGACGCTAAGAGATTTAATCTGGCTTTATTTA
GAGTCTGCAGGGCTTTCGGGATCTTAGACAAAGAGGAGGGTATAATTATA
CCGGGAACCACAAGTGGGAGGCTCCGTGCATGCGACCTACAATTCCCGCC
ACCAAAGAATACTCCATTATGGAATGCTGTAACCAAAGATGAGTGGGAAT
CTGCTGCTACAGCGGATATGGACCGCCATGGCATATATGATCCTCTGCCA
CAGGAATGGATCTCAAACTCCGCAGACATCGTGGAACTTGTTGTCACTGG
ATTTCCCCTGGATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42345ASPNIDRAFT_42345Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42345-T1.exon1ASPNIDRAFT_42345-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42345-T1.exon2ASPNIDRAFT_42345-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42345-T1.cdsASPNIDRAFT_42345-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42345-T1ASPNIDRAFT_42345-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:718714..719777 +
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