|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:245789..247683+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_42507-T1 ID=ASPNIDRAFT_42507-T1|Name=ASPNIDRAFT_42507-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1895bp|location=Sequence derived from alignment at ACJE01000006.1:245789..247683+ (Aspergillus niger ATCC 1015)
ATGGCCACCTCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCA
AGCATGTCGCTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCC
AGACCTGTGTTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGT
CAGCCCAGGCTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCA
AACACATCTGCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGAC
AGGCACAGTCTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGT
GCTACAGGCAGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAG
CAGTTTGAGAAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTG
CATCTGGATACGTTCGTTATCTACCATTCGCAACTCACGCCAGCCAACTT
CAACTGAGTCCTACAGGTACAGGCTCTTCACTTCCCAGTGTAGACACTGA
AATACCAGATGAGAGCGACGACCTTCAAATTCCGTTGACGAAATGCTCTG
TTTCCAGAGATGAGCTGGTAGCTATTCTTCCGCCACGTCGGTATTGCGAT
GCGTTGAAGAATGTCTACTTTCAAGTATTCTCGCCTGTATGTTTTGAACT
CCAATGATTTTCTTGAGCTATTCCTTCGCCAAGTGTCTTTTCATAAGTAC
CTGTGCTAACTCGGGACCTAGATGTTTCATATCCTGCATGACCTGACATT
TGAGGCCGAATACCAACAATTTTGTCACGATTCCAGCAGCGTCACAACAG
CGTGGATTGCGCTACTTTTTGCCATTCTGGGAATTGCCGTCACAGCGCTC
GAGGATGATGAGCCGTTGCTTTCCGATTTAGGTCGTGAGAAGACTGTCAC
CCGTAATATCAAAGTCCTATCATCGCGGTATCGATCCGCCTCGCTGCGCT
GTTTGGCCGCAGATGATGTCCTGTCTCGTCACTCCATCAATTCTCTCCAA
TCCCTTATTCTGATAAATTACGCGCGTATTCACCGGGGGCTTCCTACCTG
GACTCTTTTAGGCTTCACACATCATGTCGCCATATCCATGGGCTGTCATG
TTGACCCAGATCGATTCCCGCTCGGGCCTATTGAGCGTGAAGAGCGCAGA
CGAGCTTGGGCCGGAGTAACTATGCTTTATACTATTCAAAATACAGTTTT
TTGGCCATCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTG
GAGATCAACGACGTGGACCTACTCACGGGGTCTTTATCTGAGCAATCGTC
GCGTCCAACGCAAATGACGTATCTCCTGCTTGAATTTCGATTGGACAAGG
TCTTGTCTATGATTTGTCAAACACTTTTCAGCTTCTGCCCCAAGTTCAGC
CTCTCTCAACTAGAAGCGCAGGTTTTGGCTGTTCACGAGATATGCGACAG
ACGGTATCAGATCAACCCGAACCTTGAACCTCTGCCAGTACACCATGTCG
CCAATCTCAATATTCTTTACAGCTATATTCACCAGCTACTGTTGCTTCTA
CTTCGACCAGGTCTCTGCTGCTACCTCCAAGGTGAATTTACACCAGAAAC
GTACGCCGCTAGAACGAAATGTGTAGCCTCTGCAAAGGCATCTCTCTCGA
TCTATCACTCGCTCCATGAGTCGCCTCAGTTCGCCTCATATAAGTGGTAC
AACTGTGGGCTTGGAAGCTTTCACGCTTTTCACGCAGCTGTAGTCTTGTC
AGTGACATTGATTTACCCTGAGAGTCAGTTTGAGTTTGTCGAGATAAAAG
ATATGCTCTGGAAGTCACTGGATGTGTTTGCTGCTTTATCAAATCGCAGC
AATTTCTGCAGCAAAGCAGTTCCCGTTCTTCGTCGGCTCATGTGA back to topCoding sequence (CDS) from alignment at ACJE01000006.1:245789..247683+ >ASPNIDRAFT_42507-T1 ID=ASPNIDRAFT_42507-T1|Name=ASPNIDRAFT_42507-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6588bp|location=Sequence derived from alignment at ACJE01000006.1:245789..247683+ (Aspergillus niger ATCC 1015)
ATGGCCACCTCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCA
AGCATGTCGCTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCC
AGACCTGTGTTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGT
CAGCCCAGGCTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCA
AACACATCTGCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGAC
AGGCACAGTCTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGT
GCTACAGGCAGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAG
CAGTTTGAGAAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTG
CATCTGGATACGTTCGCTCTTCACTTCCCAGTGTAGACACTGAAATACCA
GATGAGAGCGACGACCTTCAAATTCCGTTGACGAAATGCTCTGTTTCCAG
AGATGAGCTGGTAGCTATTCTTCCGCCACGTCGGTATTGCGATGCGTTGA
AGAATGTCTACTTTCAAGTATTCTCGCCTGTATCGTGGATTGCGCTACTT
TTTGCCATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCGTT
GCTTTCCGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGTCC
TATCATCGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATGAT
GTCCTGTCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATAAA
TTACGCGCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTTCA
CACATCATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGATTC
CCGCTCGGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGATT
TTTTGGCCATCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCT
TGGAGATCAACGACGTGGACCTACTCACGGGGTCTTTATCTGAGCAATCG
TCGCGTCCAACGCAAATGACGTATCTCCTGCTTGAATTTCGATTGGACAA
GGTCTTGTCTATGATTTGTCAAACACTTTTCAGCTTCTGCCCCAAGTTCA
GCCTCTCTCAACTAGAAGCGCAGGTTTTGGCTGTTCACGAGATATGCGAC
AGACGGTATCAGATCAACCCGAACCTTGAACCTCTGCCAGTACACCATGT
CGCCAATCTCAATATTCTTTACAGCTATATTCACCAGCTACTGTTGCTTC
TACTTCGACCAGGTCTCTGCTGCTACCTCCAAGGTGAATTTACACCAGAA
ACGTACGCCGCTAGAACGAAATGTGTAGCCTCTGCAAAGGCATCTCTCTC
GATCTATCACTCGCTCCATGAGTCGCCTCAGTTCGCCTCATATAAGTGGT
ACAACTGTGGGCTTGGAAGCTTTCACGCTTTTCACGCAGCTGTAGTCTTG
TCAGTGACATTGATTTACCCTGAGAGTCAGTTTGAGTTTGTCGAGATAAA
AGATATGCTCTGGAAGTCACTGGATGTGTTTGCTGCTTTATCAAATCGCA
GCAATTTCTGCAGCAAAGCAGTTCCCGTTCTTCGTCGGCTCATGTGAATG
GCCACCTCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCAAGC
ATGTCGCTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCCAGA
CCTGTGTTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGTCAG
CCCAGGCTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCAAAC
ACATCTGCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGACAGG
CACAGTCTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGTGCT
ACAGGCAGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAGCAG
TTTGAGAAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTGCAT
CTGGATACGTTCGCTCTTCACTTCCCAGTGTAGACACTGAAATACCAGAT
GAGAGCGACGACCTTCAAATTCCGTTGACGAAATGCTCTGTTTCCAGAGA
TGAGCTGGTAGCTATTCTTCCGCCACGTCGGTATTGCGATGCGTTGAAGA
ATGTCTACTTTCAAGTATTCTCGCCTGTATCGTGGATTGCGCTACTTTTT
GCCATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCGTTGCT
TTCCGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGTCCTAT
CATCGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATGATGTC
CTGTCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATAAATTA
CGCGCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTTCACAC
ATCATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGATTCCCG
CTCGGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGATTTTT
TGGCCATCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTGG
AGATCAACGACGTGGACCTACTCACGGGGTCTTTATCTGAGCAATCGTCG
CGTCCAACGCAAATGACGTATCTCCTGCTTGAATTTCGATTGGACAAGGT
CTTGTCTATGATTTGTCAAACACTTTTCAGCTTCTGCCCCAAGTTCAGCC
TCTCTCAACTAGAAGCGCAGGTTTTGGCTGTTCACGAGATATGCGACAGA
CGGTATCAGATCAACCCGAACCTTGAACCTCTGCCAGTACACCATGTCGC
CAATCTCAATATTCTTTACAGCTATATTCACCAGCTACTGTTGCTTCTAC
TTCGACCAGGTCTCTGCTGCTACCTCCAAGGTGAATTTACACCAGAAACG
TACGCCGCTAGAACGAAATGTGTAGCCTCTGCAAAGGCATCTCTCTCGAT
CTATCACTCGCTCCATGAGTCGCCTCAGTTCGCCTCATATAAGTGGTACA
ACTGTGGGCTTGGAAGCTTTCACGCTTTTCACGCAGCTGTAGTCTTGTCA
GTGACATTGATTTACCCTGAGAGTCAGTTTGAGTTTGTCGAGATAAAAGA
TATGCTCTGGAAGTCACTGGATGTGTTTGCTGCTTTATCAAATCGCAGCA
ATTTCTGCAGCAAAGCAGTTCCCGTTCTTCGTCGGCTCATGTGAATGGCC
ACCTCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCAAGCATG
TCGCTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCCAGACCT
GTGTTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGTCAGCCC
AGGCTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCAAACACA
TCTGCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGACAGGCAC
AGTCTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGTGCTACA
GGCAGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAGCAGTTT
GAGAAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTGCATCTG
GATACGTTCGCTCTTCACTTCCCAGTGTAGACACTGAAATACCAGATGAG
AGCGACGACCTTCAAATTCCGTTGACGAAATGCTCTGTTTCCAGAGATGA
GCTGGTAGCTATTCTTCCGCCACGTCGGTATTGCGATGCGTTGAAGAATG
TCTACTTTCAAGTATTCTCGCCTGTATCGTGGATTGCGCTACTTTTTGCC
ATTCTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCGTTGCTTTC
CGATTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGTCCTATCAT
CGCGGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATGATGTCCTG
TCTCGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATAAATTACGC
GCGTATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTTCACACATC
ATGTCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGATTCCCGCTC
GGGCCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGATTTTTTGG
CCATCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTGGAGA
TCAACGACGTGGACCTACTCACGGGGTCTTTATCTGAGCAATCGTCGCGT
CCAACGCAAATGACGTATCTCCTGCTTGAATTTCGATTGGACAAGGTCTT
GTCTATGATTTGTCAAACACTTTTCAGCTTCTGCCCCAAGTTCAGCCTCT
CTCAACTAGAAGCGCAGGTTTTGGCTGTTCACGAGATATGCGACAGACGG
TATCAGATCAACCCGAACCTTGAACCTCTGCCAGTACACCATGTCGCCAA
TCTCAATATTCTTTACAGCTATATTCACCAGCTACTGTTGCTTCTACTTC
GACCAGGTCTCTGCTGCTACCTCCAAGGTGAATTTACACCAGAAACGTAC
GCCGCTAGAACGAAATGTGTAGCCTCTGCAAAGGCATCTCTCTCGATCTA
TCACTCGCTCCATGAGTCGCCTCAGTTCGCCTCATATAAGTGGTACAACT
GTGGGCTTGGAAGCTTTCACGCTTTTCACGCAGCTGTAGTCTTGTCAGTG
ACATTGATTTACCCTGAGAGTCAGTTTGAGTTTGTCGAGATAAAAGATAT
GCTCTGGAAGTCACTGGATGTGTTTGCTGCTTTATCAAATCGCAGCAATT
TCTGCAGCAAAGCAGTTCCCGTTCTTCGTCGGCTCATGTGAATGGCCACC
TCGAATCGCTCAAGCAGCAAGAGGTTGCCCATAAGTTGCCAAGCATGTCG
CTCGAGAAAGATACGCTGCTCCCGTGACGGACGTCCGTGCCAGACCTGTG
TTCGTCGAGGATTGGGCGCTGAGGACTGCATATACCTGGGTCAGCCCAGG
CTGTCCTCTGAGCATGCCTTGACGGCAGAGTCTGCGGGGCAAACACATCT
GCTCGCACGGATCCGCGACTTGGAGGAGCTACTTCATAGACAGGCACAGT
CTCAGTCAAGTGGCTCCGTGTCCCCGCAAAACTCTCCTAGTGCTACAGGC
AGCTTCCTTGAGTCCGATAGAGGTGTCGAGCTGAAGCCCAGCAGTTTGAG
AAGCCCCTTGTTAAATAATGTGGGCACTCTTCAGACCTTTGCATCTGGAT
ACGTTCGCTCTTCACTTCCCAGTGTAGACACTGAAATACCAGATGAGAGC
GACGACCTTCAAATTCCGTTGACGAAATGCTCTGTTTCCAGAGATGAGCT
GGTAGCTATTCTTCCGCCACGTCGGTATTGCGATGCGTTGAAGAATGTCT
ACTTTCAAGTATTCTCGCCTGTATCGTGGATTGCGCTACTTTTTGCCATT
CTGGGAATTGCCGTCACAGCGCTCGAGGATGATGAGCCGTTGCTTTCCGA
TTTAGGTCGTGAGAAGACTGTCACCCGTAATATCAAAGTCCTATCATCGC
GGTATCGATCCGCCTCGCTGCGCTGTTTGGCCGCAGATGATGTCCTGTCT
CGTCACTCCATCAATTCTCTCCAATCCCTTATTCTGATAAATTACGCGCG
TATTCACCGGGGGCTTCCTACCTGGACTCTTTTAGGCTTCACACATCATG
TCGCCATATCCATGGGCTGTCATGTTGACCCAGATCGATTCCCGCTCGGG
CCTATTGAGCGTGAAGAGCGCAGACGAGCTTGGGCCGGATTTTTTGGCCA
TCTTGGTCATCATATACCCTCTCAAGGTGTGAAGCCTCCCTTGGAGATCA
ACGACGTGGACCTACTCACGGGGTCTTTATCTGAGCAATCGTCGCGTCCA
ACGCAAATGACGTATCTCCTGCTTGAATTTCGATTGGACAAGGTCTTGTC
TATGATTTGTCAAACACTTTTCAGCTTCTGCCCCAAGTTCAGCCTCTCTC
AACTAGAAGCGCAGGTTTTGGCTGTTCACGAGATATGCGACAGACGGTAT
CAGATCAACCCGAACCTTGAACCTCTGCCAGTACACCATGTCGCCAATCT
CAATATTCTTTACAGCTATATTCACCAGCTACTGTTGCTTCTACTTCGAC
CAGGTCTCTGCTGCTACCTCCAAGGTGAATTTACACCAGAAACGTACGCC
GCTAGAACGAAATGTGTAGCCTCTGCAAAGGCATCTCTCTCGATCTATCA
CTCGCTCCATGAGTCGCCTCAGTTCGCCTCATATAAGTGGTACAACTGTG
GGCTTGGAAGCTTTCACGCTTTTCACGCAGCTGTAGTCTTGTCAGTGACA
TTGATTTACCCTGAGAGTCAGTTTGAGTTTGTCGAGATAAAAGATATGCT
CTGGAAGTCACTGGATGTGTTTGCTGCTTTATCAAATCGCAGCAATTTCT
GCAGCAAAGCAGTTCCCGTTCTTCGTCGGCTCATGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:245789..247683 + |
|
