You are here

ASPNIDRAFT_42540-T1, ASPNIDRAFT_42540-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42540-T1
Unique NameASPNIDRAFT_42540-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:88659..89547+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42540-T1 ID=ASPNIDRAFT_42540-T1|Name=ASPNIDRAFT_42540-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=889bp|location=Sequence derived from alignment at ACJE01000006.1:88659..89547+ (Aspergillus niger ATCC 1015)
ATGTTCATTCGCTTCTCTCTATTTTTTTTTTCCCTTGCCAACCTCTCCCA GTGTGTTGTGTCTCCATCATCGCCTGTCCTCCCTCCAGCCATCGACTAAT CCACCTTCCCCAACCTTAACCGTCGAAACTCTCCTCCCATAAGGGAAATC CATCGGACGATTGATCCCTCATTATTGAAGGTTGGCTCTGCATACCGCAA CTTCCGTCCCCAGTCGCCAGCCCCTCCGTCCGGCCGCCCATCCTATCTCC CACCACCATCTCCACTACGTACTACTACAGCTATCCACCACTGCCGCCTC CCATCCCTTTCTTCGTTTCGACTCCTCTGCTTTGCGTGGCTGTCTGCTTC TTTTTTTGGGGCATCATCTCGCGTCACCCCTTGCGCTGCCAGTCCCTCGG CCGGAGAAGCGCAGTCATTCAGGTTTTAAAGGAAGAAAGGGAGACGGAAG GGAGACGAATCTTGCTGCTGCCGGTGTCCTTCTATCAAATCAAAATCATC CCTCTCGCATCCCTCTCTGTAACTCGTTACCTCTTCTCGCGCATCGCTTG CAGTTATTCGCTGTCTGGGAACTTTCTCGCGTCCGCCTCGTCGCGCCAGT CCTCGTTCCTGTCGCCGCTGCATCTTCGCGCGTCGCGCCTGCTTGTTTTG ACGCCTGGGTTGTCACCCTGAAACATTCCGTCTTATCGAACAATATCGCA TTAGGCGCCGAGCGAAACTGCGAAGGTCCCTTCAAGGATATTGCGTGTTT CAGGCGCGTGGCCCCGTGCCTCAGCGCGAAAGAGTCCCCGCTTGTGCTTG TTCCTGCCCTCATCCACACACTCTTGGGGTGTATGGAGGCTTCAACAAGC GCATTCGAAGCCCCCCGTGGTCTCGGAATAGGCTGGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:88659..89547+

>ASPNIDRAFT_42540-T1 ID=ASPNIDRAFT_42540-T1|Name=ASPNIDRAFT_42540-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1368bp|location=Sequence derived from alignment at ACJE01000006.1:88659..89547+ (Aspergillus niger ATCC 1015)
ATGTTCATTCGCTTCTCTCTATTTTTTTTTTCCCTTGCCAACCTCTCCCA
GTGTGTTGTGTCTCCATCATCGCCTCTATCCACCACTGCCGCCTCCCATC
CCTTTCTTCGTTTCGACTCCTCTGCTTTGCGTGGCTGTCTGCTTCTTTTT
TTGGGGCATCATCTCGCGTCACCCCTTGCGCTGCCAGTCCCTCGGCCGGA
GAAGCGCAGTCATTCAGGTTTTAAAGGAAGAAAGGGAGACGGAAGGGAGA
CGAATCTTGCTGCTGCCGGTGTCCTTCTATCAAATCAAAATCATCCCTCT
CGCATCCCTCTCTGTAACTCGTTACCTCTTCTCGCGCATCGCTTGCAGTT
ATTCGCTGTCTGGGAACTTTCTCGCGTCCGCCTCGTCGCGCCAGTCCTCG
TTCCTGTCGCCGCTGCATCTTCGCGCGTCGCGCCTGCTTGTTTTGACGCC
TGGGTTGTCACCCTGAAACATTCCGTCTTATCGAACAATATCGCATTAGG
CGCCGAGCGAAACTGCGAAGGTCCCTTCAAGGATATTGCGTGTTTCAGGC
GCGTGGCCCCGTGCCTCAGCGCGAAAGAGTCCCCGCTTGTGCTTGTTCCT
GCCCTCATCCACACACTCTTGGGGTGTATGGAGGCTTCAACAAGCGCATT
CGAAGCCCCCCGTGGTCTCGGAATAGGCTGGTGAATGTTCATTCGCTTCT
CTCTATTTTTTTTTTCCCTTGCCAACCTCTCCCAGTGTGTTGTGTCTCCA
TCATCGCCTCTATCCACCACTGCCGCCTCCCATCCCTTTCTTCGTTTCGA
CTCCTCTGCTTTGCGTGGCTGTCTGCTTCTTTTTTTGGGGCATCATCTCG
CGTCACCCCTTGCGCTGCCAGTCCCTCGGCCGGAGAAGCGCAGTCATTCA
GGTTTTAAAGGAAGAAAGGGAGACGGAAGGGAGACGAATCTTGCTGCTGC
CGGTGTCCTTCTATCAAATCAAAATCATCCCTCTCGCATCCCTCTCTGTA
ACTCGTTACCTCTTCTCGCGCATCGCTTGCAGTTATTCGCTGTCTGGGAA
CTTTCTCGCGTCCGCCTCGTCGCGCCAGTCCTCGTTCCTGTCGCCGCTGC
ATCTTCGCGCGTCGCGCCTGCTTGTTTTGACGCCTGGGTTGTCACCCTGA
AACATTCCGTCTTATCGAACAATATCGCATTAGGCGCCGAGCGAAACTGC
GAAGGTCCCTTCAAGGATATTGCGTGTTTCAGGCGCGTGGCCCCGTGCCT
CAGCGCGAAAGAGTCCCCGCTTGTGCTTGTTCCTGCCCTCATCCACACAC
TCTTGGGGTGTATGGAGGCTTCAACAAGCGCATTCGAAGCCCCCCGTGGT
CTCGGAATAGGCTGGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42540ASPNIDRAFT_42540Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42540-T1.exon1ASPNIDRAFT_42540-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42540-T1.exon2ASPNIDRAFT_42540-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42540-T1.cdsASPNIDRAFT_42540-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42540-T1ASPNIDRAFT_42540-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:88659..89547 +