You are here

Home

ASPNIDRAFT_42654-T1, ASPNIDRAFT_42654-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42654-T1
Unique NameASPNIDRAFT_42654-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:277236..278837-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42654-T1 ID=ASPNIDRAFT_42654-T1|Name=ASPNIDRAFT_42654-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1602bp|location=Sequence derived from alignment at ACJE01000020.1:277236..278837- (Aspergillus niger ATCC 1015)
ATGGAGCACGCTCACCAGGCGTTCCCTAAATTATGTGATGATATATTATC
CTTGCCACCACTGCATGATGAAGACGCTGTTTCATATCCCGCCACCGTAG
ACCCCATCTTCTCGCTACCGTCGGAGCTTCCCGATAGCTTCTCTCCTCTT
CCATTCCAGCCAGATGCGACATCAGTATCTCCAGATAGCGGACCTACCCC
GCCTACACGCCCTCATCAGCGTCTATCCGTGGAGGCCGTGAGAACCCTCA
AGTCATGGCTCAACAACCACCCGGAGAACCCATATCCCACGACCCAGGAG
AAGGATGAGCTGGCGCAACGCACCAGTCTGACTCGGGCGCAAGTCTCCAA
CTGGTTTATCAACGCTCGACGGCGTAAGCGCTCCAGCGGGTATATGTCTG
CCTGTCAGAGCCCGTCATTCCTATCCCCCATGGAACGTTGGAGGAGCTCG
CCACCGGAAAGCGAGGCCGCAGCCACAGATGACATCCTGCGAGCTCTCGC
CGATAGCGATATTTCCGCTTTTTCGGACAGCTCGCCATACACTGTACCTC
AGTACGCCTGGTCCAGCAACGACTCCAGCGGCTCCTTCGTTCTCGGGGAT
GCTTCCATCAGCAGCTGTGGACGCAGCCAGTCATCCAGCTCGGAGATTTC
GGTCGCCTTATCATCGCATAGGCCGCCACAACGTCCACCAACCCCACTTC
ATCGTCCGTCATCTCGTCGCCACCGTCGGAAACACATCCGTCATGCAAAC
CGTCTGCAGTGGACTCGTAGGCCCTACCAGTGTACGTTCTGCGCGGACAC
GTTCGCAACGAAATACGACTGGCAGCGCCACGAGAAGGCTCTTCACCTTC
CCGTCGACCAATGGCGCTGTTCTCCAGAAGGCGGACTCATCATCGACAAC
AACGGCACACCTGTGTGCGTCTTCTGTCAACAAGCCAACGCAGACGAAGA
CCATCTCGAAACAGCACACAACTACAGTACCTGTCTCGAGAAACCATCCG
AGCAACGCATCTTCACTCGGAAGGACAACCTCCGGCAGCACCTGAAACTA
ACCCACCGCGTCGACACTTTCCATGCAGCCATGCTCACCTGGCGCGAAAG
CCGAGGCCACGGTATCCTCTCCCGCTGCGGGTTCTGCAGCGCAATGTTTC
AATCCTGGCAGGAGAGAGTCGACCATGTCGCAGAGCATTTCAAGCACGGT
GCCGACATGAAGCAGTGGATGGGCGATTGGGGTTTCGAGCCGGAAGCTCA
GCGGCTCGTTGAGAATGCGATACCGCCATATTTGATTGGGCGTGAGGCGC
AGACGCCTGATCCGTGGCGGACATCGGATGTGTTTCCGATGCCGCGGGAG
GAGGATGAAGAGGACGATGAAATTCCGTTTCGGTGGGATGTGCCGACTGC
TTTGGATCGGTATTTTGATGTGCACCGCGATCTGTTGGCGTTTATTCGCG
AACAGATGTCGAATGGATGCAGGCCGTCGGATCAGATGATTCAGGATCGT
GCGAGGCTGTTCGCGTATGAGAGTGATGATCCGTGGAACCAGACATATGC
GGATGATTTGTGTTGGCTGGAGGCGGTTAAGCAGGAAGCTGGGTTGGTTT
AG
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:277236..278837-

>ASPNIDRAFT_42654-T1 ID=ASPNIDRAFT_42654-T1|Name=ASPNIDRAFT_42654-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1602bp|location=Sequence derived from alignment at ACJE01000020.1:277236..278837- (Aspergillus niger ATCC 1015)
ATGGAGCACGCTCACCAGGCGTTCCCTAAATTATGTGATGATATATTATC
CTTGCCACCACTGCATGATGAAGACGCTGTTTCATATCCCGCCACCGTAG
ACCCCATCTTCTCGCTACCGTCGGAGCTTCCCGATAGCTTCTCTCCTCTT
CCATTCCAGCCAGATGCGACATCAGTATCTCCAGATAGCGGACCTACCCC
GCCTACACGCCCTCATCAGCGTCTATCCGTGGAGGCCGTGAGAACCCTCA
AGTCATGGCTCAACAACCACCCGGAGAACCCATATCCCACGACCCAGGAG
AAGGATGAGCTGGCGCAACGCACCAGTCTGACTCGGGCGCAAGTCTCCAA
CTGGTTTATCAACGCTCGACGGCGTAAGCGCTCCAGCGGGTATATGTCTG
CCTGTCAGAGCCCGTCATTCCTATCCCCCATGGAACGTTGGAGGAGCTCG
CCACCGGAAAGCGAGGCCGCAGCCACAGATGACATCCTGCGAGCTCTCGC
CGATAGCGATATTTCCGCTTTTTCGGACAGCTCGCCATACACTGTACCTC
AGTACGCCTGGTCCAGCAACGACTCCAGCGGCTCCTTCGTTCTCGGGGAT
GCTTCCATCAGCAGCTGTGGACGCAGCCAGTCATCCAGCTCGGAGATTTC
GGTCGCCTTATCATCGCATAGGCCGCCACAACGTCCACCAACCCCACTTC
ATCGTCCGTCATCTCGTCGCCACCGTCGGAAACACATCCGTCATGCAAAC
CGTCTGCAGTGGACTCGTAGGCCCTACCAGTGTACGTTCTGCGCGGACAC
GTTCGCAACGAAATACGACTGGCAGCGCCACGAGAAGGCTCTTCACCTTC
CCGTCGACCAATGGCGCTGTTCTCCAGAAGGCGGACTCATCATCGACAAC
AACGGCACACCTGTGTGCGTCTTCTGTCAACAAGCCAACGCAGACGAAGA
CCATCTCGAAACAGCACACAACTACAGTACCTGTCTCGAGAAACCATCCG
AGCAACGCATCTTCACTCGGAAGGACAACCTCCGGCAGCACCTGAAACTA
ACCCACCGCGTCGACACTTTCCATGCAGCCATGCTCACCTGGCGCGAAAG
CCGAGGCCACGGTATCCTCTCCCGCTGCGGGTTCTGCAGCGCAATGTTTC
AATCCTGGCAGGAGAGAGTCGACCATGTCGCAGAGCATTTCAAGCACGGT
GCCGACATGAAGCAGTGGATGGGCGATTGGGGTTTCGAGCCGGAAGCTCA
GCGGCTCGTTGAGAATGCGATACCGCCATATTTGATTGGGCGTGAGGCGC
AGACGCCTGATCCGTGGCGGACATCGGATGTGTTTCCGATGCCGCGGGAG
GAGGATGAAGAGGACGATGAAATTCCGTTTCGGTGGGATGTGCCGACTGC
TTTGGATCGGTATTTTGATGTGCACCGCGATCTGTTGGCGTTTATTCGCG
AACAGATGTCGAATGGATGCAGGCCGTCGGATCAGATGATTCAGGATCGT
GCGAGGCTGTTCGCGTATGAGAGTGATGATCCGTGGAACCAGACATATGC
GGATGATTTGTGTTGGCTGGAGGCGGTTAAGCAGGAAGCTGGGTTGGTTT
AG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003676nucleic acid binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42654ASPNIDRAFT_42654Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42654-T1.cdsASPNIDRAFT_42654-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42654-T1.exon1ASPNIDRAFT_42654-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42654-T1ASPNIDRAFT_42654-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017970
DBxrefInterPro:IPR008422
DBxrefInterPro:IPR013087
DBxrefInterPro:IPR001356
DBxrefPFAM:PF00046
DBxrefPFAM:PF05920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:277236..278837 -
Powered by Drupal