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ASPNIDRAFT_42727-T1, ASPNIDRAFT_42727-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42727-T1
Unique NameASPNIDRAFT_42727-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:510151..511149+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42727-T1 ID=ASPNIDRAFT_42727-T1|Name=ASPNIDRAFT_42727-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=999bp|location=Sequence derived from alignment at ACJE01000020.1:510151..511149+ (Aspergillus niger ATCC 1015)
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACGTAAGT
CAATACATTCTCTCCCATCTCTTCTTCCTCCGAACCCGCATCGCAACAAA
CCCATATAGCAATAACATAAACTGACCACCAGCTCACAGAGTCTACGTAC
TACTCCCCCAGGGTTACCCCCTACTCACACCGCATCTCTAACACCTATGA
AACGAAATAGGTCCGCAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAA
AAGAAGCCCTGGAAGAGATCTTCTCCGAATACGGCACGGTACTTGAAATC
GTCGCGAAAACGAACCTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGA
CACCGTGGAGGCGGCGACCCGCGCCATCGACGAAATCAATGGCTTCGAAC
TCTTCGACAAACCGATGGTGTTGGATTACGCGAAGACGAGAAGTGATATG
ACGGTGTTGCGTGAGGGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACG
GAGGTTGGCTGAGAAGGGTATGCATATTTCCTTCTGTCTATTTTATCGGT
TTTGGTCCGGATGGGAAGGCTAATGTGTCATGTGGTTGGTGTTTGGTGTA
GAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGCG
ACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAGG
GCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGAC
GAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATAC
TGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTCC
AGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTAC
GAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGCC
TATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGA
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Coding sequence (CDS) from alignment at ACJE01000020.1:510151..511149+

>ASPNIDRAFT_42727-T1 ID=ASPNIDRAFT_42727-T1|Name=ASPNIDRAFT_42727-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2250bp|location=Sequence derived from alignment at ACJE01000020.1:510151..511149+ (Aspergillus niger ATCC 1015)
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACGGTCCG
CAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAGAAGCCCTGGAAG
AGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTCGCGAAAACGAAC
CTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGACACCGTGGAGGCGGC
GACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCTTCGACAAACCGA
TGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACGGTGTTGCGTGAG
GGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAGGTTGGCTGAGAA
GGAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGC
GACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAG
GGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGA
CGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATA
CTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTC
CAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTA
CGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGC
CTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGA
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACGGTCCG
CAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAGAAGCCCTGGAAG
AGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTCGCGAAAACGAAC
CTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGACACCGTGGAGGCGGC
GACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCTTCGACAAACCGA
TGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACGGTGTTGCGTGAG
GGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAGGTTGGCTGAGAA
GGAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGC
GACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAG
GGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGA
CGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATA
CTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTC
CAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTA
CGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGC
CTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGA
ATGGCGACCATAACAGCGCCCACCCCGATACCCCCCAACTGCACGGTCCG
CAACTTAGAAGAGCGCATCAAAGTCGACCAGCTAAAAGAAGCCCTGGAAG
AGATCTTCTCCGAATACGGCACGGTACTTGAAATCGTCGCGAAAACGAAC
CTCAAGGCAAAAGGGCAGGCGTTTGTTGTGTTCGACACCGTGGAGGCGGC
GACCCGCGCCATCGACGAAATCAATGGCTTCGAACTCTTCGACAAACCGA
TGGTGTTGGATTACGCGAAGACGAGAAGTGATATGACGGTGTTGCGTGAG
GGCGGAGAGGATGAGCTAGAGGCGCATAAGAGACGGAGGTTGGCTGAGAA
GGAACGCAAACAAGCGCACGAAGCCCTCGAAGCTCAGAAAAAGCTCAAGC
GACCCCCCGGTGCTCCTACGGAACCTGGCCGTCCTGCGAAAACCGCCAAG
GGCGCTGGTCTCAAGCCTACCAGTGGGGCTGCGGCGGCGGTTATTCCGGA
CGAGTATCTGCCCCCGAACAAGATTCTCTTCTTGCGCGACTTGCCCGATA
CTGCGGATCAGGACAGTCTGACGGCTGTGTTCGGTCGGTTCGAAGGATTC
CAGGAGGTTCGGTTGGTGCCCGGACGCAAGGGTATTGCGTTCGTCGAGTA
CGAGAACGAGTCTGGGGCTATCAGTGCCAAGGAGGCGACGTCGGGGATGC
CTATGGGAGAGGCTGGGAAGCCGATTCGGGTTACTTACCAGAGACAATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42727ASPNIDRAFT_42727Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42727-T1.exon1ASPNIDRAFT_42727-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42727-T1.exon2ASPNIDRAFT_42727-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42727-T1.exon3ASPNIDRAFT_42727-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42727-T1.cdsASPNIDRAFT_42727-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42727-T1ASPNIDRAFT_42727-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:510151..511149 +
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