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ASPNIDRAFT_42900-T1, ASPNIDRAFT_42900-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42900-T1
Unique NameASPNIDRAFT_42900-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1094655..1096491-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42900-T1 ID=ASPNIDRAFT_42900-T1|Name=ASPNIDRAFT_42900-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1837bp|location=Sequence derived from alignment at ACJE01000020.1:1094655..1096491- (Aspergillus niger ATCC 1015)
ATGTCGCTCCCCGGTCTTGATCTAACACAACCCTCCGCGGACCGCGAGTT
CGCGCCAGCCCCGCCCTCTCAGATTAGCCTTCCCAAAGGCTCAGAGTGGC
GGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAGGTGAGCTGCCGT
GACCCCCTCAGCACATTACCCATCCCTCACGAATCACAAAAAAAAAAAAG
ACAGTTGACTGACATATCTACCACCTGGAGAGCTAGCTCTTAGCCGGAAC
CGCCGAACTCTTTGGCACCGAACTAGCCCCCTCGCAAACCTACACCTTCT
CCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGCACACTAGAAGTA
AGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGCCCCGGGAGGCAC
AAATGGAACAACGGCGCGCGGACTCGGCGCGGGCGGCTGCCAGAGCGAGT
ACGTGGCGGAGGAAACACCGATGGTTGAATACGCGAACGTGCATTTTGCG
CTGGAGACACTACGACAGGAGGCCAAAGCGACAGGGAAAGATGGCCCGCG
GGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAAGTCTGTCGAAGA
TCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCGCTGGTGGTTAAT
TTGGATCCTACGGAGGGCATGCTAAGTGTTCCGGGGACGTTGACGGCTAC
GGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGGGGAGTAGTCCCA
TGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTGGTGTATTTCTAT
CCGATGCAGAACCCATTGGAGGCCGATGGCTCGGTGTATAAGGCTATTGT
GTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGGAGGATGAGGATG
CAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATATTGAGTCAGAGT
AAGGCTGGGAATGTCGAGATGATTAATCATATTGTGACGGAGTTTGCGAG
TGAGTTTTTACTTGATCCTGGTTGGAAGGGTGTATGCGCTGACGGGGTTA
TGGCACAGTTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACAGCA
TCATGATGAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCAGCG
GCGTCGGATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGGTTG
TGTTGATCGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGATCC
GGACATACTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCGCTG
TCGCTGTCTGCGTCGTCAACGACGAATGTTACTTTGTCGCCACATGCGCA
GCAGCTAGACTTCAACGCTTTAGCGGTCTACAACTACACCATAGCGTCAG
CAGAGGAGGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGCGAT
GCCTTCCTCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCCGCA
AGAAGAGGCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGGTGA
AGGAGACGGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAGGTA
CTGCCTCCTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATCACACA
TGCAAGCTCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCATGG
GCTTCTTGTATGTGGCTGACGTGGACGCGGAGAAGGGCAAGATCCGAGTG
CTGGCGCCGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGGGAA
GAAATGGCCTGGGGAGGTGGTGGGATTGGTGGGATAG
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Coding sequence (CDS) from alignment at ACJE01000020.1:1094655..1096491-

>ASPNIDRAFT_42900-T1 ID=ASPNIDRAFT_42900-T1|Name=ASPNIDRAFT_42900-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5040bp|location=Sequence derived from alignment at ACJE01000020.1:1094655..1096491- (Aspergillus niger ATCC 1015)
TTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACAGCATCATGATG
AAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCAGCGGCGTCGGA
TGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGGTTGTGTTGATC
GCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGATCCGGACATAC
TTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCGCTGTCGCTGTC
TGCGTCGTCAACGACGAATGTTACTTTGTCGCCACATGCGCAGCAGCTAG
ACTTCAACGCTTTAGCGGTCTACAACTACACCATAGCGTCAGCAGAGGAG
GACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGCGATGCCTTCCT
CCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCCGCAAGAAGAGG
CTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGGTGAAGGAGACG
GTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAGGTACTGCCTCC
TGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATCACACATGCAAGCT
CGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCATGGGCTTCTTG
TATGTGGCTGACGTGGACGCGGAGAAGGGCAAGATCCGAGTGCTGGCGCC
GGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGGGAAGAAATGGC
CTGGGGAGGTGGTGGGATTGGTGGGATAGCTCTTAGCCGGAACCGCCGAA
CTCTTTGGCACCGAACTAGCCCCCTCGCAAACCTACACCTTCTCCGGCAC
GAAAGCAGCAATCTACACCTGGCATGGATGCACACTAGAAGTAAGCGCCG
GAGAGGCCATCACAGGTCTGGACAGCCTCGCCCCGGGAGGCACAAATGGA
ACAACGGCGCGCGGACTCGGCGCGGGCGGCTGCCAGAGCGAGTACGTGGC
GGAGGAAACACCGATGGTTGAATACGCGAACGTGCATTTTGCGCTGGAGA
CACTACGACAGGAGGCCAAAGCGACAGGGAAAGATGGCCCGCGGGTACTG
ATTCTCGGTCCTGAGGATGCGGGCAAGACAAGTCTGTCGAAGATCCTGAC
GGCGTATGCGACTAAGGTGGGCCGGCAGCCGCTGGTGGTTAATTTGGATC
CTACGGAGGGCATGCTAAGTGTTCCGGGGACGTTGACGGCTACGGCGTTC
CGGACGATGATTGATGTTGAGGAAGGATGGGGGAGTAGTCCCATGTCCGG
GCCGAGTGCGGTGCCGGTGAAGTTGCCCTTGGTGTATTTCTATCCGATGC
AGAACCCATTGGAGGCCGATGGCTCGGTGTATAAGGCTATTGTGTCGAGG
TTGGCGCTGTCGGTGACGGGGAGGATGGCGGAGGATGAGGATGCAAGGGA
GACGGGAATTATTGTGGATACGCCGGGAATATTGAGTCAGAGTAAGGCTG
GGAATGTCGAGATGATTAATCATATTGTGACGGAGTTTGCGAATGTCGCT
CCCCGGTCTTGATCTAACACAACCCTCCGCGGACCGCGAGTTCGCGCCAG
CCCCGCCCTCTCAGATTAGCCTTCCCAAAGGCTCAGAGTGGCGGTTCGAA
GTCGCCTTTGGCACGACCGTCCGCGTAAAGTTACGACGATCTTGGTCATT
GGCTCCGAGCGACTGTACAGCATCATGATGAAGAACTTTGATAACAAGCC
CACGGCTAGTGCGTCTGCAGCGGCGTCGGATGAGCGCATTTCGGTGGTTA
AGTTGTCCAAGTCTGGGGGTTGTGTTGATCGCGATGCGGCGTTCATGAAG
GCTGTCAGCGAGTCGCAGATCCGGACATACTTCTTCGGCAACCCAATTCC
TTCGACGGCATCGGCAGCGCTGTCGCTGTCTGCGTCGTCAACGACGAATG
TTACTTTGTCGCCACATGCGCAGCAGCTAGACTTCAACGCTTTAGCGGTC
TACAACTACACCATAGCGTCAGCAGAGGAGGACGAAGACGAATATGACCC
GTCGCAGCTGGGTACCGGCGATGCCTTCCTCCCAGGTGGAAGCAACGACG
TGGACCTGGGTCAGACTCCGCAAGAAGAGGCTCCGGTCGCACCGACGCTG
CCTGGGATCGCTGGACCGGTGAAGGAGACGGTGACGCCGGCGGGGTCGTC
CAACGTGCCACTGAAGAAGGTACTGCCTCCTGCGCCGACAGCGCTGGCCA
ATTCGCTGCTGGCCATCACACATGCAAGCTCGACGGCCAGCCCGGCGGAT
GTGCGCGATGCCAGTATCATGGGCTTCTTGTATGTGGCTGACGTGGACGC
GGAGAAGGGCAAGATCCGAGTGCTGGCGCCGGTTGGAGGTCGCGTGCCAC
CGCGGGCGATTGTATGGGGGAAGAAATGGCCTGGGGAGGTGGTGGGATTG
GTGGGATAGCTCTTAGCCGGAACCGCCGAACTCTTTGGCACCGAACTAGC
CCCCTCGCAAACCTACACCTTCTCCGGCACGAAAGCAGCAATCTACACCT
GGCATGGATGCACACTAGAAGTAAGCGCCGGAGAGGCCATCACAGGTCTG
GACAGCCTCGCCCCGGGAGGCACAAATGGAACAACGGCGCGCGGACTCGG
CGCGGGCGGCTGCCAGAGCGAGTACGTGGCGGAGGAAACACCGATGGTTG
AATACGCGAACGTGCATTTTGCGCTGGAGACACTACGACAGGAGGCCAAA
GCGACAGGGAAAGATGGCCCGCGGGTACTGATTCTCGGTCCTGAGGATGC
GGGCAAGACAAGTCTGTCGAAGATCCTGACGGCGTATGCGACTAAGGTGG
GCCGGCAGCCGCTGGTGGTTAATTTGGATCCTACGGAGGGCATGCTAAGT
GTTCCGGGGACGTTGACGGCTACGGCGTTCCGGACGATGATTGATGTTGA
GGAAGGATGGGGGAGTAGTCCCATGTCCGGGCCGAGTGCGGTGCCGGTGA
AGTTGCCCTTGGTGTATTTCTATCCGATGCAGAACCCATTGGAGGCCGAT
GGCTCGGTGTATAAGGCTATTGTGTCGAGGTTGGCGCTGTCGGTGACGGG
GAGGATGGCGGAGGATGAGGATGCAAGGGAGACGGGAATTATTGTGGATA
CGCCGGGAATATTGAGTCAGAGTAAGGCTGGGAATGTCGAGATGATTAAT
CATATTGTGACGGAGTTTGCGAATGTCGCTCCCCGGTCTTGATCTAACAC
AACCCTCCGCGGACCGCGAGTTCGCGCCAGCCCCGCCCTCTCAGATTAGC
CTTCCCAAAGGCTCAGAGTGGCGGTTCGAAGTCGCCTTTGGCACGACCGT
CCGCGTAAAGTTACGACGATCTTGGTCATTGGCTCCGAGCGACTGTACAG
CATCATGATGAAGAACTTTGATAACAAGCCCACGGCTAGTGCGTCTGCAG
CGGCGTCGGATGAGCGCATTTCGGTGGTTAAGTTGTCCAAGTCTGGGGGT
TGTGTTGATCGCGATGCGGCGTTCATGAAGGCTGTCAGCGAGTCGCAGAT
CCGGACATACTTCTTCGGCAACCCAATTCCTTCGACGGCATCGGCAGCGC
TGTCGCTGTCTGCGTCGTCAACGACGAATGTTACTTTGTCGCCACATGCG
CAGCAGCTAGACTTCAACGCTTTAGCGGTCTACAACTACACCATAGCGTC
AGCAGAGGAGGACGAAGACGAATATGACCCGTCGCAGCTGGGTACCGGCG
ATGCCTTCCTCCCAGGTGGAAGCAACGACGTGGACCTGGGTCAGACTCCG
CAAGAAGAGGCTCCGGTCGCACCGACGCTGCCTGGGATCGCTGGACCGGT
GAAGGAGACGGTGACGCCGGCGGGGTCGTCCAACGTGCCACTGAAGAAGG
TACTGCCTCCTGCGCCGACAGCGCTGGCCAATTCGCTGCTGGCCATCACA
CATGCAAGCTCGACGGCCAGCCCGGCGGATGTGCGCGATGCCAGTATCAT
GGGCTTCTTGTATGTGGCTGACGTGGACGCGGAGAAGGGCAAGATCCGAG
TGCTGGCGCCGGTTGGAGGTCGCGTGCCACCGCGGGCGATTGTATGGGGG
AAGAAATGGCCTGGGGAGGTGGTGGGATTGGTGGGATAGCTCTTAGCCGG
AACCGCCGAACTCTTTGGCACCGAACTAGCCCCCTCGCAAACCTACACCT
TCTCCGGCACGAAAGCAGCAATCTACACCTGGCATGGATGCACACTAGAA
GTAAGCGCCGGAGAGGCCATCACAGGTCTGGACAGCCTCGCCCCGGGAGG
CACAAATGGAACAACGGCGCGCGGACTCGGCGCGGGCGGCTGCCAGAGCG
AGTACGTGGCGGAGGAAACACCGATGGTTGAATACGCGAACGTGCATTTT
GCGCTGGAGACACTACGACAGGAGGCCAAAGCGACAGGGAAAGATGGCCC
GCGGGTACTGATTCTCGGTCCTGAGGATGCGGGCAAGACAAGTCTGTCGA
AGATCCTGACGGCGTATGCGACTAAGGTGGGCCGGCAGCCGCTGGTGGTT
AATTTGGATCCTACGGAGGGCATGCTAAGTGTTCCGGGGACGTTGACGGC
TACGGCGTTCCGGACGATGATTGATGTTGAGGAAGGATGGGGGAGTAGTC
CCATGTCCGGGCCGAGTGCGGTGCCGGTGAAGTTGCCCTTGGTGTATTTC
TATCCGATGCAGAACCCATTGGAGGCCGATGGCTCGGTGTATAAGGCTAT
TGTGTCGAGGTTGGCGCTGTCGGTGACGGGGAGGATGGCGGAGGATGAGG
ATGCAAGGGAGACGGGAATTATTGTGGATACGCCGGGAATATTGAGTCAG
AGTAAGGCTGGGAATGTCGAGATGATTAATCATATTGTGACGGAGTTTGC
GAATGTCGCTCCCCGGTCTTGATCTAACACAACCCTCCGCGGACCGCGAG
TTCGCGCCAGCCCCGCCCTCTCAGATTAGCCTTCCCAAAGGCTCAGAGTG
GCGGTTCGAAGTCGCCTTTGGCACGACCGTCCGCGTAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005849mRNA cleavage factor complex
Vocabulary: Biological Process
TermDefinition
GO:0031124mRNA 3'-end processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CLP1ASPNIDRAFT_42900Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42900-T1ASPNIDRAFT_42900-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42900-T1.cdsASPNIDRAFT_42900-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42900-T1.exon3ASPNIDRAFT_42900-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42900-T1.exon2ASPNIDRAFT_42900-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42900-T1.exon1ASPNIDRAFT_42900-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR028606
DBxrefInterPro:IPR010655
DBxrefInterPro:IPR038238
DBxrefInterPro:IPR032319
DBxrefInterPro:IPR038239
DBxrefInterPro:IPR032324
DBxrefPFAM:PF16575
DBxrefPFAM:PF16573
DBxrefPFAM:PF06807
ProductCleavage polyadenylation factor subunit clp1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1094655..1096491 -
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