You are here

Home

ASPNIDRAFT_42917-T1, ASPNIDRAFT_42917-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42917-T1
Unique NameASPNIDRAFT_42917-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1146170..1147611+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42917-T1 ID=ASPNIDRAFT_42917-T1|Name=ASPNIDRAFT_42917-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1442bp|location=Sequence derived from alignment at ACJE01000020.1:1146170..1147611+ (Aspergillus niger ATCC 1015)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACAGTAAGACTCCCTCACTATCCATCTCGTGACTTGTGA
AACGCTGATTCGGTCCAGTTTTCCGACAACCTCACCTACTGGCGTAACAA
CTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCG
GCGACAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAAT
GGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCC
GATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCT
ACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAAC
ATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTG
GGGCGATAACTGGGTGCAGAATACGGATGGTTTCGGTATGATTCTTTTTG
TCCGCGCTCTAGTGGAATGGGTTAGGTTCTGACTAGCACTCGTATCCAGA
TACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCG
GAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAG
AATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCA
ATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATG
TACGTGATTGTTTCCCGGCCACCATCGCCATTAGTATTAACCGTAATCCA
GATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCT
GGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCT
CGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAA
TGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACA
ACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTT
GTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGT
CTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGG
TGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAA
TATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1146170..1147611+

>ASPNIDRAFT_42917-T1 ID=ASPNIDRAFT_42917-T1|Name=ASPNIDRAFT_42917-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5088bp|location=Sequence derived from alignment at ACJE01000020.1:1146170..1147611+ (Aspergillus niger ATCC 1015)
ATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGT
TGGCCATGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAG
CAAACGGGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAA
GAGTGTGGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTG
GATTGCGACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGC
GGGGGAAGTGGACATTTTCCGACAACCTCACCTACTGGCGTAACAACTCC
TACCCCATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGA
CAACATCACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCA
ATACTTGGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATG
CCATTTGTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGT
CAAGGATCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGC
GTTTCAACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGC
GATAACTGGGTGCAGAATACGGATGGTTTCGATACCATGGACGCTACCAA
CATCCAGCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATCGCTA
TCAAGCCCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCGTGGA
GGCAACGGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATAGCAG
TGTTGCTAACATTCGCGTGGACAAGGTCAATATCATCCGCTACAACGAAG
ACATGCACAACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCC
CAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAG
CATCCGTAACGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTG
GCCCTTCCATCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACA
AGCAAGATGTCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGT
GGATACTGAGAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATC
CGTGCTACAATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAAT
GCCACAACAGCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGT
GCATGGGTTGAGTGGGTGTTGAATGCAACTAAGAGCTTCGGTTTTGCTCT
CTTTCCTGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAAC
CACAATGTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTCCC
CAATATTATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTT
TCCCCGAAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACATTG
AAGGACGTCGCAATCGAATGGCGGGGGAAGTGGACATTTTCCGACAACCT
CACCTACTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATG
CCGGCTTCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACC
GGCGGCATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGA
CACGCAGCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGG
TTATTGTTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAAC
ATCATGAACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCAC
GGCTGTAGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTT
TCGATACCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAA
GGCGGAGATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACAT
CCAGAATGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGG
GTCAATATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTC
AATATCATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGAC
CTGGGTCGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTAC
CTCGTGGCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTC
AATGTACAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGA
CAACGGTTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGT
TTGTCAATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACG
GTCTCCTGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGT
GGTGTTGTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTA
AATATACAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGAATGCAA
CTAAGAGCTTCGGTTTTGCTCTCTTTCCTGGGGCTGGCCTCCGTTGGCCA
TGCAGGTAATGTGGAAAACAACCACAATGTCTGCACCGTCCGAGCAAACG
GGGGACACCAAGATGACGTCCCCAATATTATGGCGGCGTTCAAAGAGTGT
GGCAATGGAGGTACCATTATTTTCCCCGAAGACCAATCGTACTGGATTGC
GACGAGACTGCATCCCACATTGAAGGACGTCGCAATCGAATGGCGGGGGA
AGTGGACATTTTCCGACAACCTCACCTACTGGCGTAACAACTCCTACCCC
ATTGCGTTCCAGAACCATCATGCCGGCTTCATTATTAGCGGCGACAACAT
CACCATCAATGGCTATGGCACCGGCGGCATTGATGGCAATGGCAATACTT
GGTACACAGCCGAGAAGGGCGACACGCAGCCGGGGCGTCCGATGCCATTT
GTCTTTTGGAACGTGTCTGAGGTTATTGTTGACAGTTTCTACGTCAAGGA
TCCGCCCCTCTGGAGTGTCAACATCATGAACGGGACTAACATGCGTTTCA
ACAATATCTACTGCAACGCCACGGCTGTAGATGCCCCCTGGGGCGATAAC
TGGGTGCAGAATACGGATGGTTTCGATACCATGGACGCTACCAACATCCA
GCTCACCAACTTCGTCTACCAAGGCGGAGATGACTGCATCGCTATCAAGC
CCCGCTCCTACAACATCGACATCCAGAATGTTACCTGCCGTGGAGGCAAC
GGCATTGCCATTGGCAGCTTGGGTCAATATTTGGAAGATAGCAGTGTTGC
TAACATTCGCGTGGACAAGGTCAATATCATCCGCTACAACGAAGACATGC
ACAACAGCGCCTACCTCAAGACCTGGGTCGGAGCTCTCGTCCCCCAAAGT
TCCTACGAAAGCGCCGGCGTACCTCGTGGCGATGGCTGGGGCAGCATCCG
TAACGTCCTATTTTCAAACTTCAATGTACAAGGCGCAAGCGCTGGCCCTT
CCATCAGTCAGGACAGTGGAGACAACGGTTCCTATGCGGGTACAAGCAAG
ATGTCTATTTCAAATGTTGCGTTTGTCAATTTCACGGGATGGGTGGATAC
TGAGAAGTCTGTGGTCTCGACGGTCTCCTGCTCAGAGGTACATCCGTGCT
ACAATATCGACTATGACAATGTGGTGTTGTATCCAGGGAAGAATGCCACA
ACAGCTGGGACAGGGTCTTGTAAATATACAGCTGATGGAGGAGTGCATGG
GTTGAGTGGGTGTTGAATGCAACTAAGAGCTTCGGTTTTGCTCTCTTTCC
TGGGGCTGGCCTCCGTTGGCCATGCAGGTAATGTGGAAAACAACCACAAT
GTCTGCACCGTCCGAGCAAACGGGGGACACCAAGATGACGTCCCCAATAT
TATGGCGGCGTTCAAAGAGTGTGGCAATGGAGGTACCATTATTTTCCCCG
AAGACCAATCGTACTGGATTGCGACGAGACTGCATCCCACATTGAAGGAC
GTCGCAATCGAATGGCGGGGGAAGTGGACATTTTCCGACAACCTCACCTA
CTGGCGTAACAACTCCTACCCCATTGCGTTCCAGAACCATCATGCCGGCT
TCATTATTAGCGGCGACAACATCACCATCAATGGCTATGGCACCGGCGGC
ATTGATGGCAATGGCAATACTTGGTACACAGCCGAGAAGGGCGACACGCA
GCCGGGGCGTCCGATGCCATTTGTCTTTTGGAACGTGTCTGAGGTTATTG
TTGACAGTTTCTACGTCAAGGATCCGCCCCTCTGGAGTGTCAACATCATG
AACGGGACTAACATGCGTTTCAACAATATCTACTGCAACGCCACGGCTGT
AGATGCCCCCTGGGGCGATAACTGGGTGCAGAATACGGATGGTTTCGATA
CCATGGACGCTACCAACATCCAGCTCACCAACTTCGTCTACCAAGGCGGA
GATGACTGCATCGCTATCAAGCCCCGCTCCTACAACATCGACATCCAGAA
TGTTACCTGCCGTGGAGGCAACGGCATTGCCATTGGCAGCTTGGGTCAAT
ATTTGGAAGATAGCAGTGTTGCTAACATTCGCGTGGACAAGGTCAATATC
ATCCGCTACAACGAAGACATGCACAACAGCGCCTACCTCAAGACCTGGGT
CGGAGCTCTCGTCCCCCAAAGTTCCTACGAAAGCGCCGGCGTACCTCGTG
GCGATGGCTGGGGCAGCATCCGTAACGTCCTATTTTCAAACTTCAATGTA
CAAGGCGCAAGCGCTGGCCCTTCCATCAGTCAGGACAGTGGAGACAACGG
TTCCTATGCGGGTACAAGCAAGATGTCTATTTCAAATGTTGCGTTTGTCA
ATTTCACGGGATGGGTGGATACTGAGAAGTCTGTGGTCTCGACGGTCTCC
TGCTCAGAGGTACATCCGTGCTACAATATCGACTATGACAATGTGGTGTT
GTATCCAGGGAAGAATGCCACAACAGCTGGGACAGGGTCTTGTAAATATA
CAGCTGATGGAGGAGTGCATGGGTTGAGTGGGTGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42917ASPNIDRAFT_42917Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42917-T1.exon1ASPNIDRAFT_42917-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42917-T1.exon2ASPNIDRAFT_42917-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42917-T1.exon3ASPNIDRAFT_42917-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42917-T1.exon4ASPNIDRAFT_42917-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42917-T1.cdsASPNIDRAFT_42917-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42917-T1ASPNIDRAFT_42917-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-20)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefPFAM:PF00295
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1146170..1147611 +
Powered by Drupal