You are here

Home

ASPNIDRAFT_43410-T1, ASPNIDRAFT_43410-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43410-T1
Unique NameASPNIDRAFT_43410-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:564246..565052-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43410-T1 ID=ASPNIDRAFT_43410-T1|Name=ASPNIDRAFT_43410-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=807bp|location=Sequence derived from alignment at ACJE01000001.1:564246..565052- (Aspergillus niger ATCC 1015)
ATGCCGCTCACATACTCAACCATCCCGCTCAAAGTCAATGGCGTGCGCCT
CGAAATCTCCACCATCCACAACAACAAGCTCAACTCCAACCCACCAATCG
TCTTCCTGCACGGCTTCGGCTCCTGCAAAGAAGACATAGCCGATATAATC
GTGCATCCATCCTTCCAACAGTATGCCTATCTGGCATTCGACGCCCCCGG
GTGCGGACACTCACATACCGACGACCTTTCCGTCGTCGACATTCCCTTCC
TAGTTGCCACCGCGGAAGCGGTCCTCGCGCATTTCGGCATCGATCAGTTC
CACCTCATGGGCCACTCCATGGGCGGACTTACTGCGCTTCTGCTGGCGCA
TAGGCTCCCCGATCGTGTGTTGAGCTTCGTCGACATCAAGGGAAATCTTG
CCCCCGAGGACTGCTTCCTTAGTCGTCAGATCTTTCAGTTCCCGGCTGAT
GATCCGGAGGCGTTTATGGATGCTTTTATTGTCCGTACGGAAACGGCGGA
GTCGTATGCTAGTCCGTTGTATGCAAGTACATTGCGCGCGAGGGTCCGGT
CGGGTGCTGTGAGGCCGATCTTTGAGTCGATGGTGAAGTTGTCGGATGAG
GAGGATTTAATGGGGATGTTTCTGGGGCTGCCCTGTAGGAAGATGTTTAT
GTTCGGGGAGGAGAATCGGGGGTTGTCGTATTTGCCCAGGTTGGAGAAGG
AGGGGATCGAGTTGGCGATGATTGCTGAAAGTGGGCATTTTCCTATGTAT
TCGAATCCGGTGGAGATGTATCGCCGGATTGCTGGGTTTTTGGAGGGTAG
GGCGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:564246..565052-

>ASPNIDRAFT_43410-T1 ID=ASPNIDRAFT_43410-T1|Name=ASPNIDRAFT_43410-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=807bp|location=Sequence derived from alignment at ACJE01000001.1:564246..565052- (Aspergillus niger ATCC 1015)
ATGCCGCTCACATACTCAACCATCCCGCTCAAAGTCAATGGCGTGCGCCT
CGAAATCTCCACCATCCACAACAACAAGCTCAACTCCAACCCACCAATCG
TCTTCCTGCACGGCTTCGGCTCCTGCAAAGAAGACATAGCCGATATAATC
GTGCATCCATCCTTCCAACAGTATGCCTATCTGGCATTCGACGCCCCCGG
GTGCGGACACTCACATACCGACGACCTTTCCGTCGTCGACATTCCCTTCC
TAGTTGCCACCGCGGAAGCGGTCCTCGCGCATTTCGGCATCGATCAGTTC
CACCTCATGGGCCACTCCATGGGCGGACTTACTGCGCTTCTGCTGGCGCA
TAGGCTCCCCGATCGTGTGTTGAGCTTCGTCGACATCAAGGGAAATCTTG
CCCCCGAGGACTGCTTCCTTAGTCGTCAGATCTTTCAGTTCCCGGCTGAT
GATCCGGAGGCGTTTATGGATGCTTTTATTGTCCGTACGGAAACGGCGGA
GTCGTATGCTAGTCCGTTGTATGCAAGTACATTGCGCGCGAGGGTCCGGT
CGGGTGCTGTGAGGCCGATCTTTGAGTCGATGGTGAAGTTGTCGGATGAG
GAGGATTTAATGGGGATGTTTCTGGGGCTGCCCTGTAGGAAGATGTTTAT
GTTCGGGGAGGAGAATCGGGGGTTGTCGTATTTGCCCAGGTTGGAGAAGG
AGGGGATCGAGTTGGCGATGATTGCTGAAAGTGGGCATTTTCCTATGTAT
TCGAATCCGGTGGAGATGTATCGCCGGATTGCTGGGTTTTTGGAGGGTAG
GGCGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43410ASPNIDRAFT_43410Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43410-T1.cdsASPNIDRAFT_43410-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43410-T1.exon1ASPNIDRAFT_43410-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43410-T1ASPNIDRAFT_43410-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteMEROPS:MER0037236
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR000073
DBxrefPFAM:PF12697
DBxrefPFAM:PF00561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:564246..565052 -
Powered by Drupal