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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000005.1:560791..562530+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_43788-T1 ID=ASPNIDRAFT_43788-T1|Name=ASPNIDRAFT_43788-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1740bp|location=Sequence derived from alignment at ACJE01000005.1:560791..562530+ (Aspergillus niger ATCC 1015)
ATGAATGTCGCCCTTGTGCAGCAGTTCATCTGTGATGTAAGCTTGCCTAC
TACCGTTGCGTGAACAACATCCATCTTACCCACGGTCGGTTATTGGTCCA
GCCGATACTATCGGAATGGTCCGCCACGGGAGGTTGTCGAGAGGCTGCCA
GGTCTGTAGGAAGAGAAAAATCAAGGTACAGTTAGACTCACTTTGTTGAA
AGCTTTTACAATTCAATCCTTGTATATTTCGCATCGACGCTTATTTTATG
AACTACAATAGTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAG
TCCGGGTGGAAGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGT
CCATCATATCCCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTA
GCTCCTCACCGGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAA
GTAAATCTCAGCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCA
ATCTGCGGAATCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCC
AGAACATTGGTCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCG
ATCGATGTCATGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGC
ACTGGCAGCTTATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAG
CTAGACAGTATTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTA
TCTCGCCGTGAAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCT
GAACACCTTTGAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAA
GAGAGACTCACTTGAGGGGGGTAGCATCCATATTGGAATTCCGAGGAGTG
GAGCTTGTCCAATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCT
TTGCATCTCGGTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGAC
TGGTCAAGCTTCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCT
GCGTGGAAATTGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACT
GGTCAAAGACCGTACGCTCTGCGATCCGGAGACTATAATCGCATCTGCTA
AGTATATAGATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGAC
TGGCAATTTCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGGG
AACGCAGTATCACGTGTATCCCGATGCATGGGTCGCAGGTGTGTGGAACA
ACATCCGTACATGTCGCTTGCTTTTGCATCAAGAGATCAAGCGGCAGTTG
GAGAATGTCCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGTC
CGTCATAATAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCTC
AATACTGCGGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCCG
CAAGCCACTTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCAA
TGGTATCCCCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTAT
CTGCCGGGCAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGAT
CGCATGCGATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTATT
TGAGGATATACTGAAACGGGCTGTGGACCCTTTTCAATAA back to topCoding sequence (CDS) from alignment at ACJE01000005.1:560791..562530+ >ASPNIDRAFT_43788-T1 ID=ASPNIDRAFT_43788-T1|Name=ASPNIDRAFT_43788-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4410bp|location=Sequence derived from alignment at ACJE01000005.1:560791..562530+ (Aspergillus niger ATCC 1015)
ATGAATGTCGCCCTTGTGCAGCAGTTCATCTGTGATTGCGACCGGGCGCG
ACCGCATTGCAACCAATGCCTCAAGTCCGGGTGGAAGTGTCCACAGTATG
GTGATTCTATAGAACGGATGTTTGTCCATCATATCCCAGAGAATTGTGAC
ACAAATAATGTGTTGAAAGCGACTAGCTCCTCACCGGGATCCTGTATAAC
AAGAAGGGCACGCATTGACCTCCAAGTAAATCTCAGCCCACCAACTGCCG
ACATACTAGGCGGAAGGATAGTCCAATCTGCGGAATCCCGTGCGATCGAT
TTCTTCATGTCAGCTCATACCTTCCAGAACATTGGTCTCATCCGGGGGCA
TTACGAGTATTTATCTGCATTCCCGATCGATGTCATGGCCGAGGAAAGAG
TTGTAGCGAGCCTCCGCGCCGTTGCACTGGCAGCTTATGCTACCAAATTC
CAACATTTTGTCCTTCTCAAAAAAGCTAGACAGTATTACGTTTCAGCACT
TCGACATATCAACGTGGCCTTGTTATCTCGCCGTGAAGCAGCAAAATATG
CCACCATCATCTCGATTCTATTTCTGAACACCTTTGAGGCCCTGACTTGT
GAAAGCAGAGACTTCCCCTATCAAAGAGAGACTCACTTGAGGGGGGTAGC
ATCCATATTGGAATTCCGAGGAGTGGAGCTTGTCCAATCTCGTCGCGGAC
TCCAATTATTTCGACAAACTCTTCTTTGCATCTCGGTGACCTGCCTAATG
CGCTCTTTTCGAATACCCATGGGACTGGTCAAGCTTCACCGCCACGCTGC
TGCTTATATGGACACTGGTGATCCTGCGTGGAAATTGTCGGATATCATGA
TAGCATTGGCATATTTCCGAGCACTGGTCAAAGACCGTACGCTCTGCGAT
CCGGAGACTATAATCGCATCTGCTAAGTATATAGATCGCAACCTCTGCTC
GCTCGCAGACAATATGCCCAAAGACTGGCAATTTCAAGTCGTGGAATTAG
AGACGACGTCTGAAGTTGTCATGGGAACGCAGTATCACGTGTATCCCGAT
GCATGGGTCGCAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACGCA
TCTATTCGAAGCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACAGC
TGGTTTCGGACATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATACCG
GATGTAGTTGATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCAGA
TGGGTTGACATCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGCTG
GTATCTACCTCCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCAAT
TCGGAAAAGCAGCGAGGTTGGATAATTGATCGCATGCGATATATTGGTGA
AACTACCGGTATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACGGG
CTGTGGACCCTTTTCAATAAATGAATGTCGCCCTTGTGCAGCAGTTCATC
TGTGATTGCGACCGGGCGCGACCGCATTGCAACCAATGCCTCAAGTCCGG
GTGGAAGTGTCCACAGTATGGTGATTCTATAGAACGGATGTTTGTCCATC
ATATCCCAGAGAATTGTGACACAAATAATGTGTTGAAAGCGACTAGCTCC
TCACCGGGATCCTGTATAACAAGAAGGGCACGCATTGACCTCCAAGTAAA
TCTCAGCCCACCAACTGCCGACATACTAGGCGGAAGGATAGTCCAATCTG
CGGAATCCCGTGCGATCGATTTCTTCATGTCAGCTCATACCTTCCAGAAC
ATTGGTCTCATCCGGGGGCATTACGAGTATTTATCTGCATTCCCGATCGA
TGTCATGGCCGAGGAAAGAGTTGTAGCGAGCCTCCGCGCCGTTGCACTGG
CAGCTTATGCTACCAAATTCCAACATTTTGTCCTTCTCAAAAAAGCTAGA
CAGTATTACGTTTCAGCACTTCGACATATCAACGTGGCCTTGTTATCTCG
CCGTGAAGCAGCAAAATATGCCACCATCATCTCGATTCTATTTCTGAACA
CCTTTGAGGCCCTGACTTGTGAAAGCAGAGACTTCCCCTATCAAAGAGAG
ACTCACTTGAGGGGGGTAGCATCCATATTGGAATTCCGAGGAGTGGAGCT
TGTCCAATCTCGTCGCGGACTCCAATTATTTCGACAAACTCTTCTTTGCA
TCTCGGTGACCTGCCTAATGCGCTCTTTTCGAATACCCATGGGACTGGTC
AAGCTTCACCGCCACGCTGCTGCTTATATGGACACTGGTGATCCTGCGTG
GAAATTGTCGGATATCATGATAGCATTGGCATATTTCCGAGCACTGGTCA
AAGACCGTACGCTCTGCGATCCGGAGACTATAATCGCATCTGCTAAGTAT
ATAGATCGCAACCTCTGCTCGCTCGCAGACAATATGCCCAAAGACTGGCA
ATTTCAAGTCGTGGAATTAGAGACGACGTCTGAAGTTGTCATGGGAACGC
AGTATCACGTGTATCCCGATGCATGGGTCGCAGAGATCAAGCGGCAGTTG
GAGAATGTCCTGGACACGCATCTATTCGAAGCCGTCCAGTATCAGCAGTC
CGTCATAATAATGCAACAGCTGGTTTCGGACATTTGTGCTTCTGTGCCTC
AATACTGCGGCTATATACCGGATGTAGTTGATGGTTCCCCAGACACGCCG
CAAGCCACTTCGGTAGCAGATGGGTTGACATCTGCTTACCAGTCCAGCAA
TGGTATCCCCGCTACCGCTGGTATCTACCTCCTTTTCTGGCCTCTTCTAT
CTGCCGGGCAGATGGCCAATTCGGAAAAGCAGCGAGGTTGGATAATTGAT
CGCATGCGATATATTGGTGAAACTACCGGTATTCAGCAAGCCTTTGTATT
TGAGGATATACTGAAACGGGCTGTGGACCCTTTTCAATAAATGAATGTCG
CCCTTGTGCAGCAGTTCATCTGTGATTGCGACCGGGCGCGACCGCATTGC
AACCAATGCCTCAAGTCCGGGTGGAAGTGTCCACAGTATGGTGATTCTAT
AGAACGGATGTTTGTCCATCATATCCCAGAGAATTGTGACACAAATAATG
TGTTGAAAGCGACTAGCTCCTCACCGGGATCCTGTATAACAAGAAGGGCA
CGCATTGACCTCCAAGTAAATCTCAGCCCACCAACTGCCGACATACTAGG
CGGAAGGATAGTCCAATCTGCGGAATCCCGTGCGATCGATTTCTTCATGT
CAGCTCATACCTTCCAGAACATTGGTCTCATCCGGGGGCATTACGAGTAT
TTATCTGCATTCCCGATCGATGTCATGGCCGAGGAAAGAGTTGTAGCGAG
CCTCCGCGCCGTTGCACTGGCAGCTTATGCTACCAAATTCCAACATTTTG
TCCTTCTCAAAAAAGCTAGACAGTATTACGTTTCAGCACTTCGACATATC
AACGTGGCCTTGTTATCTCGCCGTGAAGCAGCAAAATATGCCACCATCAT
CTCGATTCTATTTCTGAACACCTTTGAGGCCCTGACTTGTGAAAGCAGAG
ACTTCCCCTATCAAAGAGAGACTCACTTGAGGGGGGTAGCATCCATATTG
GAATTCCGAGGAGTGGAGCTTGTCCAATCTCGTCGCGGACTCCAATTATT
TCGACAAACTCTTCTTTGCATCTCGGTGACCTGCCTAATGCGCTCTTTTC
GAATACCCATGGGACTGGTCAAGCTTCACCGCCACGCTGCTGCTTATATG
GACACTGGTGATCCTGCGTGGAAATTGTCGGATATCATGATAGCATTGGC
ATATTTCCGAGCACTGGTCAAAGACCGTACGCTCTGCGATCCGGAGACTA
TAATCGCATCTGCTAAGTATATAGATCGCAACCTCTGCTCGCTCGCAGAC
AATATGCCCAAAGACTGGCAATTTCAAGTCGTGGAATTAGAGACGACGTC
TGAAGTTGTCATGGGAACGCAGTATCACGTGTATCCCGATGCATGGGTCG
CAGAGATCAAGCGGCAGTTGGAGAATGTCCTGGACACGCATCTATTCGAA
GCCGTCCAGTATCAGCAGTCCGTCATAATAATGCAACAGCTGGTTTCGGA
CATTTGTGCTTCTGTGCCTCAATACTGCGGCTATATACCGGATGTAGTTG
ATGGTTCCCCAGACACGCCGCAAGCCACTTCGGTAGCAGATGGGTTGACA
TCTGCTTACCAGTCCAGCAATGGTATCCCCGCTACCGCTGGTATCTACCT
CCTTTTCTGGCCTCTTCTATCTGCCGGGCAGATGGCCAATTCGGAAAAGC
AGCGAGGTTGGATAATTGATCGCATGCGATATATTGGTGAAACTACCGGT
ATTCAGCAAGCCTTTGTATTTGAGGATATACTGAAACGGGCTGTGGACCC
TTTTCAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000051.4 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR001138 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000005.1 | supercontig | ACJE01000005.1:560791..562530 + |
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