You are here

Home

ASPNIDRAFT_43850-T1, ASPNIDRAFT_43850-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43850-T1
Unique NameASPNIDRAFT_43850-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:372082..373565-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43850-T1 ID=ASPNIDRAFT_43850-T1|Name=ASPNIDRAFT_43850-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1484bp|location=Sequence derived from alignment at ACJE01000005.1:372082..373565- (Aspergillus niger ATCC 1015)
ATGGTCGCGACGGACTCCGGTAGTAATCCCCAGTCGCGAGGTATGCCCAG
TTTTCGTCGCACACCCGCAGGTCATGGCTAACGTCTTCTCGCGTCCCAGG
ATGCTTTCAATGCTCAAAACGCCGGATTGTCTGCGACAGAGGGGAACCTA
CCTGCTTCAAGTGTCAGAAGAAAGGGATTGAATGCTCGGGATCCGGTCGC
TTTCGCTTCAGCCCCGGCCTAGCGAGTCGGGGAAAACTCAAAGGCTGCAC
GATTCCGATACCTGATGTCGACCCGAGATCGGTATACAAAGAAGGCTTAG
ATGGCCCTCGTCCGATTCGGTGGAAGGATGACCTGAATAGAGTCAACAAA
AACCAGAAGCCCAGACTTAGCGGGAAGGAGCGGGTAGTCCGGAATGGACT
GGTCACAGAGAGGGGTTCGGCCAGTGGAGGCAGAGCTCTCGCACAATCGA
TATCTATCGCAAACCAGGACGTTATCCTTAGCTCAGGACAAGAATTGTAT
AGGAACATGCCTTCTGAGGACCCCCGGCCATCCTCAATAGTGGAGACGTC
TGTTGGCCAGTGGATCGCACCAGTCGATTACAGAACCCGCGAATCATTCG
ACTACTTCGCGAAATACGTCGCTCCTGTCATGGTTGTTCTTGATATATCC
AATGGCTACCGGGACATTATCCTCCCCATGGCTTTTGAAGACAGCCTTCT
ACAACAGGCCGTTGCTGTTGTGGCCGCGCAACATCTTGGTTCCCGACACC
CCTCATGTCGAGCGGCGACCGAGTCCAGCCGGTCGGCAATAATATCTCGC
TTACGACGTGATTCTCAGCTTGGTTCGCCCGATCTCGTGTTTAATTCATC
CACTTGGGCAACTCTGATCGTGCTACTTGTTGGGGAAACCGTCACCGGAA
GCTCCGAGTATAGCCACCTGTTACGGACTCTCCTCACCCTGGCCCAAAAC
ATGAGAAGCGTCGGAAATACCGAGCTGAGAGATTTTCTCACAAAGCAGAC
GGACATGTTTGCGTTCCTTGGACAGCCACTTTTAAACGAAGACCTGGGCG
CGGAGAGACTTAGAAATCCGGTTGATCCAAGTGTCTGGATGGCTTCGAGA
GTTAACGCTGATTCGCACCATCACAGAACATTGTCACTTGTCAGGAAAGT
CTTCTCGAAGGGTGCACAGATATATCTTCAGCGTGCGACTACAAACCAAA
GCTCGTGGCAAGTTTTGGAAGAGCTGCGCCAGCTTCTTTGTCAGATGAGC
CCCACGGAGCCAGGTGCCCATGGATTCGTATGGTCATGCTTCATTGCAGC
AGCGGATAGCGTGGATCCCGAGCACAGGGCTTTCTTCAGCGAATACTTGA
AAGGGGTATATTCACGAACAATGTTCGACAATATCCCTAAAGCTCTTGAC
GCCTTACCTGCCATTTGGGGTCTGCAGGGTTCCGCGAAGTGGACCGAAAA
CTTGCCCCGCCTGTCACCTATCTTGATCATGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:372082..373565-

>ASPNIDRAFT_43850-T1 ID=ASPNIDRAFT_43850-T1|Name=ASPNIDRAFT_43850-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2850bp|location=Sequence derived from alignment at ACJE01000005.1:372082..373565- (Aspergillus niger ATCC 1015)
GATGCTTTCAATGCTCAAAACGCCGGATTGTCTGCGACAGAGGGGAACCT
ACCTGCTTCAAGTGTCAGAAGAAAGGGATTGAATGCTCGGGATCCGGTCG
CTTTCGCTTCAGCCCCGGCCTAGCGAGTCGGGGAAAACTCAAAGGCTGCA
CGATTCCGATACCTGATGTCGACCCGAGATCGGTATACAAAGAAGGCTTA
GATGGCCCTCGTCCGATTCGGTGGAAGGATGACCTGAATAGAGTCAACAA
AAACCAGAAGCCCAGACTTAGCGGGAAGGAGCGGGTAGTCCGGAATGGAC
TGGTCACAGAGAGGGGTTCGGCCAGTGGAGGCAGAGCTCTCGCACAATCG
ATATCTATCGCAAACCAGGACGTTATCCTTAGCTCAGGACAAGAATTGTA
TAGGAACATGCCTTCTGAGGACCCCCGGCCATCCTCAATAGTGGAGACGT
CTGTTGGCCAGTGGATCGCACCAGTCGATTACAGAACCCGCGAATCATTC
GACTACTTCGCGAAATACGTCGCTCCTGTCATGGTTGTTCTTGATATATC
CAATGGCTACCGGGACATTATCCTCCCCATGGCTTTTGAAGACAGCCTTC
TACAACAGGCCGTTGCTGTTGTGGCCGCGCAACATCTTGGTTCCCGACAC
CCCTCATGTCGAGCGGCGACCGAGTCCAGCCGGTCGGCAATAATATCTCG
CTTACGACGTGATTCTCAGCTTGGTTCGCCCGATCTCGTGTTTAATTCAT
CCACTTGGGCAACTCTGATCGTGCTACTTGTTGGGGAAACCGTCACCGGA
AGCTCCGAGTATAGCCACCTGTTACGGACTCTCCTCACCCTGGCCCAAAA
CATGAGAAGCGTCGGAAATACCGAGCTGAGAGATTTTCTCACAAAGCAGA
CGGACATGTTTGCGTTCCTTGGACAGCCACTTTTAAACGAAGACCTGGGC
GCGGAGAGACTTAGAAATCCGGTTGATCCAAGTGTCTGGATGGCTTCGAG
AGTTAACGCTGATTCGCACCATCACAGAACATTGTCACTTGTCAGGAAAG
TCTTCTCGAAGGGTGCACAGATATATCTTCAGCGTGCGACTACAAACCAA
AGCTCGTGGCAAGTTTTGGAAGAGCTGCGCCAGCTTCTTTGTCAGATGAG
CCCCACGGAGCCAGGTGCCCATGGATTCGTATGGTCATGCTTCATTGCAG
CAGCGGATAGCGTGGATCCCGAGCACAGGGCTTTCTTCAGCGAATACTTG
AAAGGGGTATATTCACGAACAATGTTCGACAATATCCCTAAAGCTCTTGA
CGCCTTACCTGCCATTTGGGGTCTGCAGGGTTCCGCGAAGTGGACCGAAA
ACTTGCCCCGCCTGTCACCTATCTTGATCATGTGAATGGTCGCGACGGAC
TCCGGTAGTAATCCCCAGTCGCGAGGATGCTTTCAATGCTCAAAACGCCG
GATTGTCTGCGACAGAGGGGAACCTACCTGCTTCAAGTGTCAGAAGAAAG
GGATTGAATGCTCGGGATCCGGTCGCTTTCGCTTCAGCCCCGGCCTAGCG
AGTCGGGGAAAACTCAAAGGCTGCACGATTCCGATACCTGATGTCGACCC
GAGATCGGTATACAAAGAAGGCTTAGATGGCCCTCGTCCGATTCGGTGGA
AGGATGACCTGAATAGAGTCAACAAAAACCAGAAGCCCAGACTTAGCGGG
AAGGAGCGGGTAGTCCGGAATGGACTGGTCACAGAGAGGGGTTCGGCCAG
TGGAGGCAGAGCTCTCGCACAATCGATATCTATCGCAAACCAGGACGTTA
TCCTTAGCTCAGGACAAGAATTGTATAGGAACATGCCTTCTGAGGACCCC
CGGCCATCCTCAATAGTGGAGACGTCTGTTGGCCAGTGGATCGCACCAGT
CGATTACAGAACCCGCGAATCATTCGACTACTTCGCGAAATACGTCGCTC
CTGTCATGGTTGTTCTTGATATATCCAATGGCTACCGGGACATTATCCTC
CCCATGGCTTTTGAAGACAGCCTTCTACAACAGGCCGTTGCTGTTGTGGC
CGCGCAACATCTTGGTTCCCGACACCCCTCATGTCGAGCGGCGACCGAGT
CCAGCCGGTCGGCAATAATATCTCGCTTACGACGTGATTCTCAGCTTGGT
TCGCCCGATCTCGTGTTTAATTCATCCACTTGGGCAACTCTGATCGTGCT
ACTTGTTGGGGAAACCGTCACCGGAAGCTCCGAGTATAGCCACCTGTTAC
GGACTCTCCTCACCCTGGCCCAAAACATGAGAAGCGTCGGAAATACCGAG
CTGAGAGATTTTCTCACAAAGCAGACGGACATGTTTGCGTTCCTTGGACA
GCCACTTTTAAACGAAGACCTGGGCGCGGAGAGACTTAGAAATCCGGTTG
ATCCAAGTGTCTGGATGGCTTCGAGAGTTAACGCTGATTCGCACCATCAC
AGAACATTGTCACTTGTCAGGAAAGTCTTCTCGAAGGGTGCACAGATATA
TCTTCAGCGTGCGACTACAAACCAAAGCTCGTGGCAAGTTTTGGAAGAGC
TGCGCCAGCTTCTTTGTCAGATGAGCCCCACGGAGCCAGGTGCCCATGGA
TTCGTATGGTCATGCTTCATTGCAGCAGCGGATAGCGTGGATCCCGAGCA
CAGGGCTTTCTTCAGCGAATACTTGAAAGGGGTATATTCACGAACAATGT
TCGACAATATCCCTAAAGCTCTTGACGCCTTACCTGCCATTTGGGGTCTG
CAGGGTTCCGCGAAGTGGACCGAAAACTTGCCCCGCCTGTCACCTATCTT
GATCATGTGAATGGTCGCGACGGACTCCGGTAGTAATCCCCAGTCGCGAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43850ASPNIDRAFT_43850Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43850-T1ASPNIDRAFT_43850-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43850-T1.cdsASPNIDRAFT_43850-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43850-T1.exon2ASPNIDRAFT_43850-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43850-T1.exon1ASPNIDRAFT_43850-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:372082..373565 -
Powered by Drupal