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ASPNIDRAFT_43957-T1, ASPNIDRAFT_43957-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43957-T1
Unique NameASPNIDRAFT_43957-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:45580..46918+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43957-T1 ID=ASPNIDRAFT_43957-T1|Name=ASPNIDRAFT_43957-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1339bp|location=Sequence derived from alignment at ACJE01000005.1:45580..46918+ (Aspergillus niger ATCC 1015)
ATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGT
GCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTG
ACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCC
GAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTA
CCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACC
TGAATGATGGAACCCACGTACGTTCCCCGGGTGATTCATGTCTTATTCTC
ACACCCAATCGCGTCAATAGTACTGGCTGACAGATGTACTAGGTGATCTT
CCAGGGAGAAACCACTTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGC
GTGTTTCTGGAACTGATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTC
AATGGCGATGGCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAA
AACAAAGCCCAAGTTCTTCTATGCCCATGACTTGACCTCTTCCACCATCA
AGAGCATCTACATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGC
TCCACTGATCTTACCATGACTGATATCACGGTGGATAACACGGATGGTGA
CACGGACGACCTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGCA
CCTATATCACGATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTT
GCCATCAATTCTGGAGAGGTATGCGTCCCCTGGCACTGATTGAGAGGAGA
GGCGCCTTGCTGACGATCTGGTAGAACATTTATTTCAGTGCCAGTGTGTG
TTCTGGTGGTCACGGCCTGTCTATTGGCTCTGTTGGTGGTCGGGATGATA
ACACTGTCAAGAACGTGACGTTTTATGATGTCAATGTTCTCAAGTCCCAG
CAAGGTAAGGGAAAGCATTTGAACCATCCGTTTGCCGTCCTCTAACGTAT
GCTTTAGCAATCCGTATCAAGACCATCTACGGCGACACTGGCTCCGTCAG
CGAAGTCACTTACCATGAGATTGCCTTTTCGGACGCTACTGATTACGGCA
TTGTCATTGAGCAGAACTATGATGACACCTCCAAGACCCCTACTACCGGG
GTACCGATCACGGATTTTGTGCTCGAGAACATCGTTGGAACGTGTGAAGA
TGATGATTGTACCGAAGTATACATTGCCTGCGGTGATGGCAGCTGCTCGG
ATTGGACTTGGACTGGCGTGAGCGTGACTGGCGGCAGTGTCAGTGACGAC
TGCCTTAATGTTCCCTCCGGGATTAGCTGCGATTTGTAG
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Coding sequence (CDS) from alignment at ACJE01000005.1:45580..46918+

>ASPNIDRAFT_43957-T1 ID=ASPNIDRAFT_43957-T1|Name=ASPNIDRAFT_43957-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4620bp|location=Sequence derived from alignment at ACJE01000005.1:45580..46918+ (Aspergillus niger ATCC 1015)
ATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTTGCTGT
GCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGCGCCTG
ACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGGGCTCC
GAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACAATCTA
CCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTCTGACC
TGAATGATGGAACCCACGTGATCTTCCAGGGAGAAACCACTTTTGGATAC
GAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATCACGGT
CGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTGGTGGG
ATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCTATGCC
CATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAACTCTCC
TGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGACTGATA
TCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCAATACG
GATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGTGCCGA
AATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAACATTT
ATTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTGGCTCT
GTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTATGATGT
CAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCAAGACCATCTACGGCG
ACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTTCGGAC
GCTACTGATTACGGCATTGTCATTGAGCAGAACTATGATGACACCTCCAA
GACCCCTACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGAACATCG
TTGGAACGTGTGAAGATGATGATTGTACCGAAGTATACATTGCCTGCGGT
GATGGCAGCTGCTCGGATTGGACTTGGACTGGCGTGAGCGTGACTGGCGG
CAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGGATTAGCTGCGATT
TGTAGATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAGCTGTT
GCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACGGAAGC
GCCTGACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTTCTCGG
GCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCTCCACA
ATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGATCTCTC
TGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAGAAACCACTTTTG
GATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTGATATC
ACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGCCGCTG
GTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTTCTTCT
ATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCGAGAAC
TCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACCATGAC
TGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGCCGCCA
ATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCACAGGT
GCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGAGAGAA
CATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTCTATTG
GCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGTTTTAT
GATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCAAGACCATCTA
CGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGCCTTTT
CGGACGCTACTGATTACGGCATTGTCATTGAGCAGAACTATGATGACACC
TCCAAGACCCCTACTACCGGGGTACCGATCACGGATTTTGTGCTCGAGAA
CATCGTTGGAACGTGTGAAGATGATGATTGTACCGAAGTATACATTGCCT
GCGGTGATGGCAGCTGCTCGGATTGGACTTGGACTGGCGTGAGCGTGACT
GGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGGATTAGCTG
CGATTTGTAGATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCTGGCAG
CTGTTGCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGGTTACG
GAAGCGCCTGACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGCACCTT
CTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTCTTGCT
CCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCCTTGAT
CTCTCTGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAGAAACCAC
TTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGGAACTG
ATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATGGCAGC
CGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCCAAGTT
CTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTACATCG
AGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATCTTACC
ATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACGACCTCGC
CGCCAATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCACGATCA
CAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATTCTGGA
GAGAACATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGCCTGTC
TATTGGCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGTGACGT
TTTATGATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCAAGACC
ATCTACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAGATTGC
CTTTTCGGACGCTACTGATTACGGCATTGTCATTGAGCAGAACTATGATG
ACACCTCCAAGACCCCTACTACCGGGGTACCGATCACGGATTTTGTGCTC
GAGAACATCGTTGGAACGTGTGAAGATGATGATTGTACCGAAGTATACAT
TGCCTGCGGTGATGGCAGCTGCTCGGATTGGACTTGGACTGGCGTGAGCG
TGACTGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCGGGATT
AGCTGCGATTTGTAGATGGTCCGTCAGCTTATCCTGATCAGCAGTCTGCT
GGCAGCTGTTGCTGTGCGCGCGGCGCCTGCCGATCCGGCTCATCCCATGG
TTACGGAAGCGCCTGACGTCAATTTGGTTGAAAAGAGGGCGACTACTTGC
ACCTTCTCGGGCTCCGAAGGTGCATCCAAGGCCAGCAAGTCGAAAACCTC
TTGCTCCACAATCTACCTGTCCGACGTGGCCGTCCCATCTGGCACAACCC
TTGATCTCTCTGACCTGAATGATGGAACCCACGTGATCTTCCAGGGAGAA
ACCACTTTTGGATACGAGGAATGGGAAGGGCCTCTTGTGCGTGTTTCTGG
AACTGATATCACGGTCGAGGGGGAGAGCGACGCGGTGCTCAATGGCGATG
GCAGCCGCTGGTGGGATGGAGAGGGTGGCAATGGTGGTAAAACAAAGCCC
AAGTTCTTCTATGCCCATGACTTGACCTCTTCCACCATCAAGAGCATCTA
CATCGAGAACTCTCCTGTGCAGGTGTTCAGCATCGATGGCTCCACTGATC
TTACCATGACTGATATCACGGTGGATAACACGGATGGTGACACGGACGAC
CTCGCCGCCAATACGGATGGCTTCGACATCGGGGAAAGCACCTATATCAC
GATCACAGGTGCCGAAATCTACAACCAAGATGACTGCGTTGCCATCAATT
CTGGAGAGAACATTTATTTCAGTGCCAGTGTGTGTTCTGGTGGTCACGGC
CTGTCTATTGGCTCTGTTGGTGGTCGGGATGATAACACTGTCAAGAACGT
GACGTTTTATGATGTCAATGTTCTCAAGTCCCAGCAAGCAATCCGTATCA
AGACCATCTACGGCGACACTGGCTCCGTCAGCGAAGTCACTTACCATGAG
ATTGCCTTTTCGGACGCTACTGATTACGGCATTGTCATTGAGCAGAACTA
TGATGACACCTCCAAGACCCCTACTACCGGGGTACCGATCACGGATTTTG
TGCTCGAGAACATCGTTGGAACGTGTGAAGATGATGATTGTACCGAAGTA
TACATTGCCTGCGGTGATGGCAGCTGCTCGGATTGGACTTGGACTGGCGT
GAGCGTGACTGGCGGCAGTGTCAGTGACGACTGCCTTAATGTTCCCTCCG
GGATTAGCTGCGATTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43957ASPNIDRAFT_43957Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43957-T1.exon1ASPNIDRAFT_43957-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43957-T1.exon2ASPNIDRAFT_43957-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43957-T1.exon3ASPNIDRAFT_43957-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43957-T1.exon4ASPNIDRAFT_43957-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43957-T1.cdsASPNIDRAFT_43957-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43957-T1ASPNIDRAFT_43957-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productpolygalacturonase-3 precursor (PG-III)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:45580..46918 +
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