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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000015.1:766589..768628+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_44395-T1 ID=ASPNIDRAFT_44395-T1|Name=ASPNIDRAFT_44395-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2040bp|location=Sequence derived from alignment at ACJE01000015.1:766589..768628+ (Aspergillus niger ATCC 1015)
ATGGATCGCATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTCCT
GAGGGCTTTTAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGC
ACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATT
ACAGCCCCAGAAACCCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGA
ATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAG
GTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTA
ATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCT
GGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTG
CCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCT
GGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAA
TAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATG
AGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTT
GGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGC
CACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCATA
TAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTCC
AATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAA
GAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCA
ATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGCA
CACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTAG
ACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCA
CGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGG
AACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTAC
AGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTC
GAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGG
AAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTGT
CATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAA
GCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGAT
GCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGA
ACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATACCA
TCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCTC
AGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTGA
CTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAGG
GAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAAG
TTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCGC
TACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGG
CCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAG
CATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCG
GAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACC
TGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAG
AAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCG
GAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGA back to topCoding sequence (CDS) from alignment at ACJE01000015.1:766589..768628+ >ASPNIDRAFT_44395-T1 ID=ASPNIDRAFT_44395-T1|Name=ASPNIDRAFT_44395-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2040bp|location=Sequence derived from alignment at ACJE01000015.1:766589..768628+ (Aspergillus niger ATCC 1015)
ATGGATCGCATTCGCCAGAAACTGGGGAGATATCCCGTTTCCAGCGTCCT
GAGGGCTTTTAGAGGCCCGCGGTGGTCCCTTACGTCGATTCATTATCCGC
ACCTGCGCTTCCGCTCTACAGTCACATCCGCCGCCCTTCCCTCAGCAATT
ACAGCCCCAGAAACCCCCCCGCTGATCGTTCTCCGCGACTACCAAGAAGA
ATGCATTCAGTCTGTGCTGGATCATCTGGCCCAGGGTCACAAACGTCTAG
GTATTTCGCTTGCCACAGGAGCGGGGAAGACGGTCATCTTCACCCAATTA
ATCGGACGAATACCGCCGCGGAATGGTGTCCATGACAAGACCCTTATTCT
GGTTCACCGAAGGGAGCTAGTAGAGCAAGCTGCCCGACACTGTCGCCTTG
CCTATCCCGATCGAGCTGTGGAGATTGAGATGGGGAATAGTGTCGCGTCT
GGGTCTGGGGATATCATCATTGCTTCCATACGGAGTCTTACCTCCAAGAA
TAGGATCTCCAAATTTGATCCCAGACGTTTCAAGCTTGTCTTGGTGGATG
AGGCACACCACATTGTTGCACCGACGTACCGCGTTGCTCTCGAACATTTT
GGCCTCAGTAACCCGTCGCCGGACTCGCCAGCTCTCGTCGGGGTCTCTGC
CACGTTCTCACGCTTTGATGGACTCAAATTGGGTGCCGCAATCGACCATA
TAGTGTACCATAAGGACTACATGGATATGATTGACGAAAAATGGCTGTCC
AATGCCATTTTTACCACTGTTCGGTCAGAAGCAAATCTCTCACGCGTTAA
GAAGGACAAATTCGGTGATTTCGCTATCAGCTCGCTCTCGGAAGCCGTCA
ATACCACGAAAACTAATGATATCACTGTACGCGCATGGCTGGCTAACGCA
CACGATCGAAAGTCTACACTGGTATTTTGTGTCGACGTTGAACATACTAG
ACAGCTTACTGAGGCGTTCCGCGCACTGGGCATTGACGCTCGGTATATCA
CGGCGGGAACTCCGAGGGATGTGCGCGATGAGCAGCTGCGTGCTTTCCGG
AACCAGGAGTATCCCGTGCTTCTCAATTGCGGCTTATTTACAGAAGGTAC
AGATATTCCCAATATTGACTGCGTCCTCCTGGCACGTCCGACACGGTCTC
GAAATCTTCTTATACAGATGATCGGACGAGGGTTACGGCTGCACCCGGGG
AAGACCGACTGCCATATAATTGACATGGTGGCTACCCTGGACACTGGTGT
CATTTCTACCCCTACGCTCTTCGGACTACACCCAGATGAGCTTCTAGAAA
GCGCGAGGGCAAAAAATCTAAGAGAAAAGAAGGAGGATGCCGCAATGGAT
GCCGAAGGCCGCACCGATTATCCGCCAGAGACAAGCACGTCTGCCGAAGA
ACCCGACACAACTGATGATATCAAACTTACCTTCACCAAGTACGATACCA
TCTACGACCTCATTCATGATATGAAGTCTGAGAAACACATCCGCTCCCTC
AGTCGCTACGCCTGGGTCCGCGTAGATGAGGACAAATATACACTGTCTGA
CTCAACAGGATGGATCACCCTTGAGAAGACTAGAAACATATCTAACAAGG
GAAAAGAAAGTGACCCGTCCGCTACATATACCGTCCACCATGTGATGAAG
TTCAAGTCTGCTACTGAATCGACCCAGTACACTCGGCCACGTTTGATCGC
TACGGCCATGGACTTTGAATCCACAGTCCGTGCTGCTGATACCTTCGCGG
CCTCTGAATTCGACGAACGGTACATCTCCACCCGGCAGCCCTGGCGTCAG
CATCCGGCCACTGCAGCGCAGGTAACGATGCTGAATAAAGCTAAGATTCG
GAATGGACGGATTGCGCCTGGGGATTTGACACGAGGCCAGGCCGCAGACC
TGATTACGAAGCTGAAGTTTGGTGGGAAGAAGCGGTTCGCGAGCAGGCAG
AAAAAACGACGGGCTGCCGATGAGAAAGCACAGGAGTTGGCCGAACTCCG
GAGACGCGAAGAGGTGAGAGTGGGACCTGTAGAGGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005524 | ATP binding |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000151.6 |
| Note | BUSCO:EOG09261CM0 |
| Note | SMCOG1122:ATP-dependent RNA helicase |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR006935 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000015.1 | supercontig | ACJE01000015.1:766589..768628 + |
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