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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000015.1:1370074..1370887- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_44573-T1 ID=ASPNIDRAFT_44573-T1|Name=ASPNIDRAFT_44573-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=814bp|location=Sequence derived from alignment at ACJE01000015.1:1370074..1370887- (Aspergillus niger ATCC 1015)
ATGCCTCCGCGACGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTG
CAAAACTCGGCGAGTCAAAGTGCGTTGCCCGCTCTCCAGCCTGGAATTTC
CGCTGATCCCCACAGTGCGATGAAGCCCAGCCATGTGCCAACTGCGTGAA
ACGACACCTGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAGCCGT
ATCCCAGTACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTCGTCG
AGAACAGACGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATGCATC
TGCTTTCCTCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCATCATT
ACTGTATCTACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCGCGAT
GTTTGGCAGATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCCTCAT
GCATGGCATCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGACCCG
AAAGATACAGCCACTATCTCAACAGCTCCAACTTCCACATGGCACTGGGC
CTGCAAACATTCCGCATAATATTACAGAACCCTAACAAACAGAATTGTGA
GGCACTATTCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGAGCAC
CGACCGATCTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCTTTTC
AACTTGTGCAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACGTTGA
AAACGGTCCTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGACCCTG
GCCCGTCCCAGTAA back to topCoding sequence (CDS) from alignment at ACJE01000015.1:1370074..1370887- >ASPNIDRAFT_44573-T1 ID=ASPNIDRAFT_44573-T1|Name=ASPNIDRAFT_44573-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1536bp|location=Sequence derived from alignment at ACJE01000015.1:1370074..1370887- (Aspergillus niger ATCC 1015)
TGCGATGAAGCCCAGCCATGTGCCAACTGCGTGAAACGACACCTGACGTG
CACCTTTGAACGTCGTCCAACTAAATCCGAGCCGTATCCCAGTACGCAGT
CCGCCAAATTGTCCGAGTCGCCGACCGTTTCGTCGAGAACAGACGATGCC
ATTGCCGCCTTTCAGCATCAAGTCGCGGATGCATCTGCTTTCCTCCGCGA
GTGGGGCGCGCAGGACCCCGAATTGATGCATCATTACTGTATCTACGCCG
CAAAGACTCTGTCAGATCGGGAGGCGATCCGCGATGTTTGGCAGATTGAA
GTGCCGAAAATTGCCTATTCGTACGAATTCCTCATGCATGGCATCTTGTC
GCTGTCGGCCCTGCACTTGGCCTACACTAGACCCGAAAGATACAGCCACT
ATCTCAACAGCTCCAACTTCCACATGGCACTGGGCCTGCAAACATTCCGC
ATAATATTACAGAACCCTAACAAACAGAATTGTGAGGCACTATTCTGCTT
CTCAAGTCTAATCATGGTTTGGACCTGTGGAGCACCGACCGATCTGGGTG
ATAGCCGTCCCTTGGAAAGTATCATCCGCCTTTTCAACTTGTGCAGGGGG
ATCATGACCCTTCATCCTTTTATGTCGCACGTTGAAAACGGTCCTCTAGC
GCCATTGTTTCTAAAAGACTTTCGATCCGACCCTGGCCCGTCCCAGTAAA
TGCCTCCGCGACGAGCCCATACGAAGTCCCGGAACGGATGCGACCAGTGC
AAAACTCGGCGAGTCAAATGCGATGAAGCCCAGCCATGTGCCAACTGCGT
GAAACGACACCTGACGTGCACCTTTGAACGTCGTCCAACTAAATCCGAGC
CGTATCCCAGTACGCAGTCCGCCAAATTGTCCGAGTCGCCGACCGTTTCG
TCGAGAACAGACGATGCCATTGCCGCCTTTCAGCATCAAGTCGCGGATGC
ATCTGCTTTCCTCCGCGAGTGGGGCGCGCAGGACCCCGAATTGATGCATC
ATTACTGTATCTACGCCGCAAAGACTCTGTCAGATCGGGAGGCGATCCGC
GATGTTTGGCAGATTGAAGTGCCGAAAATTGCCTATTCGTACGAATTCCT
CATGCATGGCATCTTGTCGCTGTCGGCCCTGCACTTGGCCTACACTAGAC
CCGAAAGATACAGCCACTATCTCAACAGCTCCAACTTCCACATGGCACTG
GGCCTGCAAACATTCCGCATAATATTACAGAACCCTAACAAACAGAATTG
TGAGGCACTATTCTGCTTCTCAAGTCTAATCATGGTTTGGACCTGTGGAG
CACCGACCGATCTGGGTGATAGCCGTCCCTTGGAAAGTATCATCCGCCTT
TTCAACTTGTGCAGGGGGATCATGACCCTTCATCCTTTTATGTCGCACGT
TGAAAACGGTCCTCTAGCGCCATTGTTTCTAAAAGACTTTCGATCCGACC
CTGGCCCGTCCCAGTAAATGCCTCCGCGACGAGCCCATACGAAGTCCCGG
AACGGATGCGACCAGTGCAAAACTCGGCGAGTCAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000151.11 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000015.1 | supercontig | ACJE01000015.1:1370074..1370887 - |
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