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ASPNIDRAFT_44709-T1, ASPNIDRAFT_44709-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_44709-T1
Unique NameASPNIDRAFT_44709-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000003.1:181341..183458-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_44709-T1 ID=ASPNIDRAFT_44709-T1|Name=ASPNIDRAFT_44709-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2118bp|location=Sequence derived from alignment at ACJE01000003.1:181341..183458- (Aspergillus niger ATCC 1015)
ATGGAGGATACAAGGAATCTTGTCCCACTTGCCTCCGCCCCGGCAAAGCA
TCTCCCTCTTGACGCCCACAATGGCTCCTGTGAAACCGGCTCGTTGACCC
CAGTCCGCTTCAACTGTCAAGCCTGTGTGCGCAAGAAGATCAAATGCAAC
CGCGCGGTGCCCAAGTGTGCCAACTGCATCAAGACCAAGCTCGAGTGTGT
CTACCAGCCACCGCCGCCACGACGCAAGAGGAAACGTAGCCAGGGCGAGG
AAGATGTACATGAACGTCTGGCACGTTACGAGCGCATCTTGCACGACCAC
AATCTTCTTCCGACAGCCACCCCCTCGGTTATCAGCGGAAGAGACTTGGA
GGCCTCAGCAAATAGTATACAGGGACAGACTCCAGGGACAGCGAACTCGC
AGGCTGACGTTGCAGCCAATAAACTGCTTCCCAAGTATGGCAATTCTCGC
CACATTGACGATGTTCTGCTCCTCGACGCTGGCGAAGGTGACCTGGGTGA
GTTGTCCGTGTCCGAGTCCGAGCAACAGAACCATCATGAAGATGAGCCTG
GTCCCGACAAAGCCACTCCAACCGGTCTTCTTGGTGCCCTTGCCGCGCAT
TCCATCTCGGATGCAAGTACGAGAAGCGCGATAAGCCTCACCGACCTTCA
CCCTAGCTGTGAGCATGCGGCTAAGCTCTGGTATGCCTACGTGGAGAACG
TCGAGCCTCTTTGCAAGGTTCTTCATGTTCCGACTGTCGCCAGGATAGTC
CACACCGTCTCCAAGCACCCAGCGACTGCCTCCAAGAACGATGAATGCAT
ACTGTTTGCCATTTACCATTTCGCCGTATTTTCAATGTCCGATGACGAGT
GTTCACATGAACTCCATGATTCCAGGGCCCAGCTGATGCACAAATATCGG
ACCGCAGTCACTCAGGCATTGGTAAATGCCTCTTGGCTCAAGACAACCTC
GTTGCCGGTTTTACAGGCTTACACTCTCTTCCTTATCTCCTTGCGCACTC
AAATCGATTCTCATACATTCTGGATTTTGACTGGGATTGCAATTCGCCTG
GCCCAGCGCATAGGATTGCATCGGGACGGCGAAAGCGTCGGATTGCCCCC
ATTTGAGGTCCAGATGCGCCGGCGGCTCTTTTGGCAGCTGCTACCCTTGG
ACAGCTACGCAGGTCAAACATCCGGCACGGGTATATCCATCTCACCAGAC
AGCTGGGATACTAAGCAACCGCTAAACATTAACGATGACCAGATGTTCCC
CGGCATGAACGAGCCGCCTCATGAAAAACGAGGCGCATCAGAGATGATAT
TTTGCTTGGCTCGGATGGAGCTGTCAAATTTCTACACTCGAACCGGGGTC
CAGCTGAAGGGGAACGGGGGTACAATCGAGTTCCGGACCCCCGAGGAGAT
CGAGCGACTGATTGACGAGGTGGAAGACCTCATCGAGAAGAAGTTCTTGC
GGTACTGCGACATCTTGAACCCCTTACACTTTCTGACCACCGGCGTTATG
CGATCCGCCATTAGTGCTGTCCGGTTACGCGCGCGGATGCCGCTGCTCAA
GCAAGAAACTATAACCGACACACAGCAGAGACACCTCTGCACCCTTGCCG
AAAAGGTCCTCGACACCAGAAATGTCATGTATAGTAATCCCGCGACTCAA
AAGTTCCGCTGGCAGATGCAAGCGTTTTTCGTGTGGGATTCCCTCCTTTG
TATTCTGAGAAGCATTGCGAAGGTTGGATTTTATTCGCCATCAGAGCTTG
ATGCTGCCTGGAAAAGGGTTTCAGAGGTCTACGCGAATCACGAAGCACTG
CGTCAGGGCCGAAGGACCTTGTATGCTACGATTGCTAAGATCACTTTGAA
GGCCTGGTTACTAAACCCGCCTCGTAATTCAACTCCCGAACCGGATTTTA
TGACCGCGCTGCGCGCTCAACACAAGCCCAAAGAGATCGACCAGCGGCAT
GACAGTACGTTTGCTGCCCATCAAGCTACAGATGGGGCTTTTTCTTTCGA
TGAGCTTTTCGACGATATGAGCAGGGCTGATCCCAATATGAACAATGCCT
TCAATCTCGACCCTTCTGCCGATTGGCTATTCTGGGACCAAATGTGTGGA
GAAACCAGCCTTGGTTGA
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Coding sequence (CDS) from alignment at ACJE01000003.1:181341..183458-

>ASPNIDRAFT_44709-T1 ID=ASPNIDRAFT_44709-T1|Name=ASPNIDRAFT_44709-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2118bp|location=Sequence derived from alignment at ACJE01000003.1:181341..183458- (Aspergillus niger ATCC 1015)
ATGGAGGATACAAGGAATCTTGTCCCACTTGCCTCCGCCCCGGCAAAGCA
TCTCCCTCTTGACGCCCACAATGGCTCCTGTGAAACCGGCTCGTTGACCC
CAGTCCGCTTCAACTGTCAAGCCTGTGTGCGCAAGAAGATCAAATGCAAC
CGCGCGGTGCCCAAGTGTGCCAACTGCATCAAGACCAAGCTCGAGTGTGT
CTACCAGCCACCGCCGCCACGACGCAAGAGGAAACGTAGCCAGGGCGAGG
AAGATGTACATGAACGTCTGGCACGTTACGAGCGCATCTTGCACGACCAC
AATCTTCTTCCGACAGCCACCCCCTCGGTTATCAGCGGAAGAGACTTGGA
GGCCTCAGCAAATAGTATACAGGGACAGACTCCAGGGACAGCGAACTCGC
AGGCTGACGTTGCAGCCAATAAACTGCTTCCCAAGTATGGCAATTCTCGC
CACATTGACGATGTTCTGCTCCTCGACGCTGGCGAAGGTGACCTGGGTGA
GTTGTCCGTGTCCGAGTCCGAGCAACAGAACCATCATGAAGATGAGCCTG
GTCCCGACAAAGCCACTCCAACCGGTCTTCTTGGTGCCCTTGCCGCGCAT
TCCATCTCGGATGCAAGTACGAGAAGCGCGATAAGCCTCACCGACCTTCA
CCCTAGCTGTGAGCATGCGGCTAAGCTCTGGTATGCCTACGTGGAGAACG
TCGAGCCTCTTTGCAAGGTTCTTCATGTTCCGACTGTCGCCAGGATAGTC
CACACCGTCTCCAAGCACCCAGCGACTGCCTCCAAGAACGATGAATGCAT
ACTGTTTGCCATTTACCATTTCGCCGTATTTTCAATGTCCGATGACGAGT
GTTCACATGAACTCCATGATTCCAGGGCCCAGCTGATGCACAAATATCGG
ACCGCAGTCACTCAGGCATTGGTAAATGCCTCTTGGCTCAAGACAACCTC
GTTGCCGGTTTTACAGGCTTACACTCTCTTCCTTATCTCCTTGCGCACTC
AAATCGATTCTCATACATTCTGGATTTTGACTGGGATTGCAATTCGCCTG
GCCCAGCGCATAGGATTGCATCGGGACGGCGAAAGCGTCGGATTGCCCCC
ATTTGAGGTCCAGATGCGCCGGCGGCTCTTTTGGCAGCTGCTACCCTTGG
ACAGCTACGCAGGTCAAACATCCGGCACGGGTATATCCATCTCACCAGAC
AGCTGGGATACTAAGCAACCGCTAAACATTAACGATGACCAGATGTTCCC
CGGCATGAACGAGCCGCCTCATGAAAAACGAGGCGCATCAGAGATGATAT
TTTGCTTGGCTCGGATGGAGCTGTCAAATTTCTACACTCGAACCGGGGTC
CAGCTGAAGGGGAACGGGGGTACAATCGAGTTCCGGACCCCCGAGGAGAT
CGAGCGACTGATTGACGAGGTGGAAGACCTCATCGAGAAGAAGTTCTTGC
GGTACTGCGACATCTTGAACCCCTTACACTTTCTGACCACCGGCGTTATG
CGATCCGCCATTAGTGCTGTCCGGTTACGCGCGCGGATGCCGCTGCTCAA
GCAAGAAACTATAACCGACACACAGCAGAGACACCTCTGCACCCTTGCCG
AAAAGGTCCTCGACACCAGAAATGTCATGTATAGTAATCCCGCGACTCAA
AAGTTCCGCTGGCAGATGCAAGCGTTTTTCGTGTGGGATTCCCTCCTTTG
TATTCTGAGAAGCATTGCGAAGGTTGGATTTTATTCGCCATCAGAGCTTG
ATGCTGCCTGGAAAAGGGTTTCAGAGGTCTACGCGAATCACGAAGCACTG
CGTCAGGGCCGAAGGACCTTGTATGCTACGATTGCTAAGATCACTTTGAA
GGCCTGGTTACTAAACCCGCCTCGTAATTCAACTCCCGAACCGGATTTTA
TGACCGCGCTGCGCGCTCAACACAAGCCCAAAGAGATCGACCAGCGGCAT
GACAGTACGTTTGCTGCCCATCAAGCTACAGATGGGGCTTTTTCTTTCGA
TGAGCTTTTCGACGATATGAGCAGGGCTGATCCCAATATGAACAATGCCT
TCAATCTCGACCCTTCTGCCGATTGGCTATTCTGGGACCAAATGTGTGGA
GAAACCAGCCTTGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VRTR1ASPNIDRAFT_44709Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44709-T1.cdsASPNIDRAFT_44709-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44709-T1.exon1ASPNIDRAFT_44709-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44709-T1ASPNIDRAFT_44709-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR007219
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
ProductTranscription factor vrtR1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000003.1supercontigACJE01000003.1:181341..183458 -
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