You are here

Home

ASPNIDRAFT_45285-T1, ASPNIDRAFT_45285-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_45285-T1
Unique NameASPNIDRAFT_45285-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1784213..1785100-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_45285-T1 ID=ASPNIDRAFT_45285-T1|Name=ASPNIDRAFT_45285-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=888bp|location=Sequence derived from alignment at ACJE01000016.1:1784213..1785100- (Aspergillus niger ATCC 1015)
ATGACCAAGCTCCTAGCAATCACCCTCATCCTCACCATCCTCTCCCTGCT
TCCAACCTGCTACAGCCACCCCATCAACGAAACCTCCCACTCCTCAGCCG
TCCCCTACGGCATGCTAATCACCCACTGCACCGTCCCCAACACCATCGCC
CTAACCTTCGACGACGGCCCCTCAACCTTCACCCCAGCCCTTCTGGACCT
CCTCAGCGAATACGGGGCACGCTCAACCTTCTTCGTGAACGGCTACCGAC
TACAGGAGAGTGCTCCCATCCTACAACGCATCTACACTGAAGGGCACCAA
ATAGCCTCTCACACGTAAGTCTCCCCAGTCTCGCTACTATCTCCATGAAA
CCGAACCCCTCGAACCAAATACCCTGATATATATTCATCACTAGATTTGG
CCACTCCTTCCTCCCTACCCTCGACAACCCCACCATAATTAACGAGATGA
ACACCCTCGAGTCCTTATTCCGGACCTTCATCGGTCGAGTCCCCACCTAT
ATGCGCCCGCCCTTCCTAGCTGTGGACGGAAGAATCCTCGCATTGATGAC
GGACTTGGAATACCATGTTATTGGGGCAAGTGTAGACACAAAGGACTTTG
AGAATAATACGCCTCAGTTAATAGGGGAGAGTGTGAGGAAGTTTGTGGAG
GGGGTGCAGGCGGGCGGGACGGTGGTGTTGGCACATGATACGCATGCGCA
GACGGTTTGGACTTTGACTAGGGTTATGTTGGAGGAGAGTAGGAGGAGGG
GGTTGATTGGTAGGTTTACCCCTCCTTGACTTTTACTTGGGATGTGTTGT
GAGTAGACGGTGGTGCTAATGGTTGGTTTGTTTAGCTACGACCGTGGCGG
ATTGCTTGGGGGAGCCGATGGATTTTTGGTACCGTTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:1784213..1785100-

>ASPNIDRAFT_45285-T1 ID=ASPNIDRAFT_45285-T1|Name=ASPNIDRAFT_45285-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2196bp|location=Sequence derived from alignment at ACJE01000016.1:1784213..1785100- (Aspergillus niger ATCC 1015)
CTACGACCGTGGCGGATTGCTTGGGGGAGCCGATGGATTTTTGGTACCGT
TAGATTTGGCCACTCCTTCCTCCCTACCCTCGACAACCCCACCATAATTA
ACGAGATGAACACCCTCGAGTCCTTATTCCGGACCTTCATCGGTCGAGTC
CCCACCTATATGCGCCCGCCCTTCCTAGCTGTGGACGGAAGAATCCTCGC
ATTGATGACGGACTTGGAATACCATGTTATTGGGGCAAGTGTAGACACAA
AGGACTTTGAGAATAATACGCCTCAGTTAATAGGGGAGAGTGTGAGGAAG
TTTGTGGAGGGGGTGCAGGCGGGCGGGACGGTGGTGTTGGCACATGATAC
GCATGCGCAGACGGTTTGGACTTTGACTAGGGTTATGTTGGAGGAGAGTA
GGAGGAGGGGGTTGATTGATGACCAAGCTCCTAGCAATCACCCTCATCCT
CACCATCCTCTCCCTGCTTCCAACCTGCTACAGCCACCCCATCAACGAAA
CCTCCCACTCCTCAGCCGTCCCCTACGGCATGCTAATCACCCACTGCACC
GTCCCCAACACCATCGCCCTAACCTTCGACGACGGCCCCTCAACCTTCAC
CCCAGCCCTTCTGGACCTCCTCAGCGAATACGGGGCACGCTCAACCTTCT
TCGTGAACGGCTACCGACTACAGGAGAGTGCTCCCATCCTACAACGCATC
TACACTGAAGGGCACCAAATAGCCTCTCACACCTACGACCGTGGCGGATT
GCTTGGGGGAGCCGATGGATTTTTGGTACCGTTAGATTTGGCCACTCCTT
CCTCCCTACCCTCGACAACCCCACCATAATTAACGAGATGAACACCCTCG
AGTCCTTATTCCGGACCTTCATCGGTCGAGTCCCCACCTATATGCGCCCG
CCCTTCCTAGCTGTGGACGGAAGAATCCTCGCATTGATGACGGACTTGGA
ATACCATGTTATTGGGGCAAGTGTAGACACAAAGGACTTTGAGAATAATA
CGCCTCAGTTAATAGGGGAGAGTGTGAGGAAGTTTGTGGAGGGGGTGCAG
GCGGGCGGGACGGTGGTGTTGGCACATGATACGCATGCGCAGACGGTTTG
GACTTTGACTAGGGTTATGTTGGAGGAGAGTAGGAGGAGGGGGTTGATTG
ATGACCAAGCTCCTAGCAATCACCCTCATCCTCACCATCCTCTCCCTGCT
TCCAACCTGCTACAGCCACCCCATCAACGAAACCTCCCACTCCTCAGCCG
TCCCCTACGGCATGCTAATCACCCACTGCACCGTCCCCAACACCATCGCC
CTAACCTTCGACGACGGCCCCTCAACCTTCACCCCAGCCCTTCTGGACCT
CCTCAGCGAATACGGGGCACGCTCAACCTTCTTCGTGAACGGCTACCGAC
TACAGGAGAGTGCTCCCATCCTACAACGCATCTACACTGAAGGGCACCAA
ATAGCCTCTCACACCTACGACCGTGGCGGATTGCTTGGGGGAGCCGATGG
ATTTTTGGTACCGTTAGATTTGGCCACTCCTTCCTCCCTACCCTCGACAA
CCCCACCATAATTAACGAGATGAACACCCTCGAGTCCTTATTCCGGACCT
TCATCGGTCGAGTCCCCACCTATATGCGCCCGCCCTTCCTAGCTGTGGAC
GGAAGAATCCTCGCATTGATGACGGACTTGGAATACCATGTTATTGGGGC
AAGTGTAGACACAAAGGACTTTGAGAATAATACGCCTCAGTTAATAGGGG
AGAGTGTGAGGAAGTTTGTGGAGGGGGTGCAGGCGGGCGGGACGGTGGTG
TTGGCACATGATACGCATGCGCAGACGGTTTGGACTTTGACTAGGGTTAT
GTTGGAGGAGAGTAGGAGGAGGGGGTTGATTGATGACCAAGCTCCTAGCA
ATCACCCTCATCCTCACCATCCTCTCCCTGCTTCCAACCTGCTACAGCCA
CCCCATCAACGAAACCTCCCACTCCTCAGCCGTCCCCTACGGCATGCTAA
TCACCCACTGCACCGTCCCCAACACCATCGCCCTAACCTTCGACGACGGC
CCCTCAACCTTCACCCCAGCCCTTCTGGACCTCCTCAGCGAATACGGGGC
ACGCTCAACCTTCTTCGTGAACGGCTACCGACTACAGGAGAGTGCTCCCA
TCCTACAACGCATCTACACTGAAGGGCACCAAATAGCCTCTCACAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45285ASPNIDRAFT_45285Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45285-T1ASPNIDRAFT_45285-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45285-T1.cdsASPNIDRAFT_45285-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45285-T1.exon3ASPNIDRAFT_45285-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_45285-T1.exon2ASPNIDRAFT_45285-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_45285-T1.exon1ASPNIDRAFT_45285-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
NoteCAZy:CE4
DBxrefInterPro:IPR011330
DBxrefInterPro:IPR002509
DBxrefPFAM:PF01522
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1784213..1785100 -
Powered by Drupal