You are here

Home

ASPNIDRAFT_45660-T1, ASPNIDRAFT_45660-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_45660-T1
Unique NameASPNIDRAFT_45660-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:579887..581527-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_45660-T1 ID=ASPNIDRAFT_45660-T1|Name=ASPNIDRAFT_45660-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1641bp|location=Sequence derived from alignment at ACJE01000015.1:579887..581527- (Aspergillus niger ATCC 1015)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000015.1:579887..581527-

>ASPNIDRAFT_45660-T1 ID=ASPNIDRAFT_45660-T1|Name=ASPNIDRAFT_45660-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1641bp|location=Sequence derived from alignment at ACJE01000015.1:579887..581527- (Aspergillus niger ATCC 1015)
ATGAGCAACTCGTCGCCTCAATATGCTTCCCAAAAGCGGAACAACGCCCC
CGAGGATTTCGAGGACAGTCAAACGGGATTGGAAATACCTTCGACCCCTT
CAACACCCATAAAAGGAGTCAAGCAGGAGCTACAGGCAAATGGGTCAAAA
TCCAGACGGAAGAGGAGAGCTTTGGATAATGCCACCAACAATGCTGCACT
GACATTGTCTCAACCATCGCAGCACAGTACACCAATGGATCATCCACCAA
AGCGCAAGAAGGTCCGCGAGTCCATGGAAAGCCAGATACAGAGTCGCAAA
ACAGATGTGGCCAAGGAAAACCTCGACAATGTACTCCTGGAGAACGCATC
TTCAGCTTCACTCGCTCTAGAACCAGAAAATAAGGACAAAGAGGGAGGGT
CTGCCCAGGAGGAATTAGAAGCAAACTTGACCACAGCGTCAAAACAATCT
ATCGAGAAATATAAAGGCTTGGTGGACTTCAAAAAGGGAAAGCGCGGTCT
GGATGCCAACAAAGGGAAAGGAGACAGATCTGGTTTCTTTACACCGGAGG
AAGTAAAGGGATTGGAATCATTCAAACTAGATTTCTGCACCACCCACGGC
ATGTCGAGCGATACGTTCGACCTTATGGTGCAGCATTCAGAAAGGGACAA
GTCAAACCCCTTCCCTTGTCCTACGGAAATCACCACAAAACCGGCTTTCT
GGAAAAAGGTCTATGAGATTATTCCGGGTCGCAACAAGAGATCGGTTTAT
CGGTTCATGAGACGACACTTTCAATGTACAACTCAGAAGCCACATTATTG
GACTGCCGAACAAGATGACGAACTCATCTTACTTCATGAACGCCACGGGC
CCAAGTGGGCTCACATCGCCAAGATGATTGGTAGAAGCGATGACGACGTG
ATACAGCGATGGAGGAATCACCTCGAACATCGCCAGACGATGAATCGAGG
GCCTTGGTCTGAATGGGAAGTATCTGCACTACTAGAGCATCTACAGGCCT
GGTGGACCCACATGAAGAAGTTAGGCCATGATGTTGGCCGGGATATCTAT
GAGATAGATGAATCCAAAATCTCTTGGGGAAACATCAGCAACAGCATGGA
CAACTGCCGTTCCAGGCAGCAGTGTGGAGACAAATTTCGCAAGATCAGGC
GCAAGGTCTTGACTCGGCGTAGCATGGGAAACCCGGATGCTTTCTACGAC
CCCGTTGTGGAGGCAAAACCACCAAAGCGCCGAGGTAAATCGAGGTCGAT
TACGTCTTCTCAGAGCCAATCAAACAAGCACTTTAAAAGTTCTGAATACG
TGGAGTCGGATGACGAGTCAGGCGAAGAGGAGACCGAGACTGACAATACT
TCCAGTATGGATCAATCAACGTCCAAGTTTGATGACAATTCATCTTCGTC
TTCGAAGTCGCTGAAATCTGCACCCAAGAACGTCAATCATTCAGTTCATT
CCTTGGAAGACAGCGATAGGTCCGATCCGGACATTTCCATCTCCGGGTCA
GAAGACTCAAATTCCGAGTCGAACCCAGGGAAATCAGGTTCTGATAATGA
TACCGGTAGTCTTCGTTCGGTACAACCGTCTGGCAAGAAGCAGTCTTCGG
GACACAAGGACACTGGAAGCCACAAAAGACAACGGCGGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45660ASPNIDRAFT_45660Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45660-T1.cdsASPNIDRAFT_45660-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45660-T1.exon1ASPNIDRAFT_45660-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45660-T1ASPNIDRAFT_45660-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR017877
DBxrefInterPro:IPR017930
DBxrefInterPro:IPR001005
DBxrefPFAM:PF13921
DBxrefPFAM:PF00249
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:579887..581527 -
Powered by Drupal