You are here

Home

ASPNIDRAFT_45712-T1, ASPNIDRAFT_45712-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_45712-T1
Unique NameASPNIDRAFT_45712-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:429805..431111-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_45712-T1 ID=ASPNIDRAFT_45712-T1|Name=ASPNIDRAFT_45712-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1307bp|location=Sequence derived from alignment at ACJE01000015.1:429805..431111- (Aspergillus niger ATCC 1015)
ATGCCTACCATCGGCCAAGTTTACCAGCTTTCCAAGACTGAAGAAGATAC
TTCAACGATTGGTACTGCGTACGGAGATATCAGGTATATTCAAGATATTC
TTTCATATATCCTTAGGGGACTAGCTGTAATTTGGGAACAGCCATGACGA
TTGAATCCCTGCCTTCTTATTGCATCACAACTAGTCAAGCCATACTAACC
TCTACAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCT
TTGAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAA
CCCACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAG
AGCTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTT
GGGGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGT
TTCCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCG
ATATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCAC
GACGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGA
ACTCGGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTG
CAGCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACCAG
CAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAGCT
CCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGGT
CCGCTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAACC
CTCGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACGT
TTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCCGG
GCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCACG
CTCGCAAATCACTCTTGCGCGCCCAATGTAAGTACACATCCCACTTCCCG
CCCAACTGCGTGTCCCCAAGTTGACCTGTCGCTCACTAACTCAACCCACC
ACGTAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTGC
ACTGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGACC
TGTCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTTG
TTCACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCCA
GAATTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000015.1:429805..431111-

>ASPNIDRAFT_45712-T1 ID=ASPNIDRAFT_45712-T1|Name=ASPNIDRAFT_45712-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3312bp|location=Sequence derived from alignment at ACJE01000015.1:429805..431111- (Aspergillus niger ATCC 1015)
GTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTGCACTGCG
GGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGACCTGTCTG
AATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTTGTTCACA
TTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCCAGAATTA
GCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCTTTGAAT
CAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAACCCACT
CAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAGAGCTCC
TCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTTGGGGGT
GGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGTTTCCCG
GCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCGATATCT
GGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCACGACGTC
GAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGAACTCGG
CGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTGCAGCCC
GGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACCAGCAACTC
ACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAGCTCCTCCG
AAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGGTCCGCTC
TAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAACCCTCGAC
CTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACGTTTTCGA
ACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCCGGGCGTCG
AGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCACGCTCGCA
AATCACTCTTGCGCGCCCAATATGCCTACCATCGGCCAAGTTTACCAGCT
TTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTACGGAGATA
TCAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACTGCAC
TGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGACCTG
TCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGTTGTT
CACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCCCAGA
ATTAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATCCTTT
GAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTACAACC
CACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGGAGAG
CTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCGTTGG
GGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGCGTTT
CCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCTCGAT
ATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTCACGA
CGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAGGAAC
TCGGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCTTGCA
GCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACCAGCA
ACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAGCTCC
TCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTGGTCC
GCTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAACCCT
CGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAACGTTT
TCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCCGGGC
GTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCACGCT
CGCAAATCACTCTTGCGCGCCCAATATGCCTACCATCGGCCAAGTTTACC
AGCTTTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTACGGA
GATATCAGGTGACACACCAAGCCGACGACCGTGGTCGAATGATGGTGACT
GCACTGCGGGACATCGCGCCAGGCGAGGAGTGTTGTACCTCCTACTTCGA
CCTGTCTGAATACGTTGACCTGCAGGCACGTCGAAAGAAAACTCAGGAGT
TGTTCACATTCACGTGTACGTGCCCGAGGTGTTTGCAGGAGGAACGGGCC
CAGAATTAGCATTCTCGGCCAGAAGGTCCGCAAGACCCAGTTTGCCAATC
CTTTGAATCAAGCCATCCTTTTTCTCCATCCACACTTGACCCAAACCTAC
AACCCACTCAAAGGCCGAACTCTGAGCACCAATGGCCCTATCCGCGCTGG
AGAGCTCCTCATGGCCGACCTCCCCTATGCCGTGCTGCCAACCGTGGCCG
TTGGGGGTGGCGACGACTCCATTTGCAGCAACCTGGGCTGCAGTCGACGC
GTTTCCCGGCATGCAGCAAATAGCGTTACATGCGAGACTGGTTGCTCTCT
CGATATCTGGTGGTGTAACGAGTCCTGCAAAGATGAAGACCAGGCCCGTC
ACGACGTCGAGTGCGCCTGGCTGAAGAAGTACAGCCCCGTTCTCCGCCAG
GAACTCGGCGATCACGATTATTACATGCTTTGGATCATCATCCGACTCCT
TGCAGCCCGGTACCTCGAGCTCCAAGGCACAACGCCAACCAACGTTCACC
AGCAACTCACATTCCAAGATCGCTTCGTTAGCGGCTGGAAAGGCGTCCAG
CTCCTCCGAAGCAACCGTGACTCCTGGCCTACATCTCAGCTTCAACACTG
GTCCGCTCTAGCCGAAAAATATTTGCTACAATCTTCGCTCCTCCCGGAAA
CCCTCGACCTCGATACCCTCGTCGACCTGATCTGCGCCGAGGAAACCAAC
GTTTTCGAACTTTGCCCCGGCCCGACGGAGATCATCCCACACCAATCTCC
GGGCGTCGAGCGCGGCACGCAGTACGGCCTAGCTGTGTTTCTGCGCATCA
CGCTCGCAAATCACTCTTGCGCGCCCAATATGCCTACCATCGGCCAAGTT
TACCAGCTTTCCAAGACTGAAGAAGATACTTCAACGATTGGTACTGCGTA
CGGAGATATCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45712ASPNIDRAFT_45712Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45712-T1ASPNIDRAFT_45712-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45712-T1.cdsASPNIDRAFT_45712-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45712-T1.exon3ASPNIDRAFT_45712-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_45712-T1.exon2ASPNIDRAFT_45712-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_45712-T1.exon1ASPNIDRAFT_45712-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001214
DBxrefPFAM:PF00856
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:429805..431111 -
Powered by Drupal