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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000015.1:155633..157161- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_45801-T1 ID=ASPNIDRAFT_45801-T1|Name=ASPNIDRAFT_45801-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1529bp|location=Sequence derived from alignment at ACJE01000015.1:155633..157161- (Aspergillus niger ATCC 1015)
ATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCTCTAGGCCA
TGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTGCTCCGATT
CATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGT
GGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGACGATACATC
ATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGTGACCGATG
CGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCCAACAGCTC
CTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCA
TACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACACCTATGATG
ACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGAC
CGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCGTTGCAGTC
AGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAAT
TGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTAACGATGGC
TACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGC
GCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGGAGCTACGG
TCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAATCTGGATAT
CCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATCCAAAAATA
CATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAATCTGGGCCT
TCGATCACAATACTGGCAAGTACCCCATTCTCGACAATCATTGACAACTG
CTAATAATCGACATCCAGATCACGCATCGTACCCTCAGACTGTGCTTGAT
GAAGCAAGTCAATACGTCGACACGGTAGCCTGGCACTGTTATGCAAAGGA
TGTTGACTGGACTGTTCTCAGCCAGTTCTACAGCGCCAACCCTGGGGTCA
AGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGGCACCAG
GCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGGGGTCAT
GGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGACCAGTG
GTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGATGACAGC
TATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAAGTTCAT
GCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCTACTCGG
GTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGAACGCGC
ACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGACTCTGTC
GACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAATCGGTGA
CTACTTGGGTCCTTCCGGCCTTGTCTTGA back to topCoding sequence (CDS) from alignment at ACJE01000015.1:155633..157161- >ASPNIDRAFT_45801-T1 ID=ASPNIDRAFT_45801-T1|Name=ASPNIDRAFT_45801-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2754bp|location=Sequence derived from alignment at ACJE01000015.1:155633..157161- (Aspergillus niger ATCC 1015)
CCAGTTCTACAGCGCCAACCCTGGGGTCAAGCAATATATGACCGAATGCT
GGACACCAGCTTCCGGATCATGGCACCAGGCTGCTGATTTTACCATGGGC
CCTCTGCAGAACTATGCGTCGGGGGTCATGGCGTGGACTCTGGGCACGAA
CACTGACGACGGTCCGCATTTGACCAGTGGTGGATGCGACGCCTGTCAGG
GCTTGGTCACCATCAACGATGATGACAGCTATACTCTTAATACTGCCTAC
TACATGATGGCACAGTTTAGCAAGTTCATGCCTCCTGGCGCGACCGTGTT
GAACGGAACGGGGAGCTATACCTACTCGGGTGGCGATGGCGTACAGTCGG
TGGCGTCCCTGAACCCTGATGGAACGCGCACAGTCATTATTGAGAATATA
TTCAGTAACGATATTTACTTGACTCTGTCGACGGAGAGCGGAGAGGAGTG
GAGTGGAAATATCCCCAGTGAATCGGTGACTACTTGGGTCCTTCCGGCCT
TGTCTTGAATGAGTTGGATGTTGTGGTATACTATAGCTGGCCTAGCATCT
CTAGGCCATGCTTCTCTTGAGAAACGCGCCACCGATGCATCTGCGTACTG
CTCCGATTCATCGGGTACCTACAAGCTCTCGTCGATCACGGCCCCAGTTC
AGGGAAGTGGCAGCCCGGGCTCAGCATCCACCTGGAAGCTAAGTATTGAC
GATACATCATCCGGTCACAAGCAGGCAATCACTGGCTTCGGGGCTGCTGT
GACCGATGCGACCGTCACGTCTTTTAACACCTTGTCGAGCTCTACCCTCC
AACAGCTCCTCAATGAGTTGATGACTTCCGATGGAGCTAATTTCTCTCTC
ATGCGCCATACCATCGGCGCGTCTGATCTGTCCGGTGATCCGGTCTACAC
CTATGATGACAACGGAAACGAAGCAGACCCCTCACTTTCCGGCTTCGGTC
TCGGCGACCGTGGCACTGCTATGGCGGAAATGTTGGCCACGATGAAATCG
TTGCAGTCAGACCTGAAGGTGCTTGGGTCCCCGTGGAGTGCGCCCGGATG
GATGAAATTGAATGGCGTGATTGATGGCAACGCGACTGATAACAACCTTA
ACGATGGCTACCTTACCAGTGGTGGCACGGGAAGCACCGGCTACTCCAGT
GCTTTCGCGCAGTACTTCGTGAAATACATCCAAGCGTACGAAGCATTAGG
AGCTACGGTCGATGCCATTACGATTCAGAATGAGCCGTTAAATAGTCAAT
CTGGATATCCCACCATGTATGTTTACGACTATGAGTCTGCGCAGCTGATC
CAAAAATACATTGGACCGGCTCTTGCCGACGCTGGACTGAGCACGGAAAT
CTGGGCCTTCGATCACAATACTGGCAACCAGTTCTACAGCGCCAACCCTG
GGGTCAAGCAATATATGACCGAATGCTGGACACCAGCTTCCGGATCATGG
CACCAGGCTGCTGATTTTACCATGGGCCCTCTGCAGAACTATGCGTCGGG
GGTCATGGCGTGGACTCTGGGCACGAACACTGACGACGGTCCGCATTTGA
CCAGTGGTGGATGCGACGCCTGTCAGGGCTTGGTCACCATCAACGATGAT
GACAGCTATACTCTTAATACTGCCTACTACATGATGGCACAGTTTAGCAA
GTTCATGCCTCCTGGCGCGACCGTGTTGAACGGAACGGGGAGCTATACCT
ACTCGGGTGGCGATGGCGTACAGTCGGTGGCGTCCCTGAACCCTGATGGA
ACGCGCACAGTCATTATTGAGAATATATTCAGTAACGATATTTACTTGAC
TCTGTCGACGGAGAGCGGAGAGGAGTGGAGTGGAAATATCCCCAGTGAAT
CGGTGACTACTTGGGTCCTTCCGGCCTTGTCTTGAATGAGTTGGATGTTG
TGGTATACTATAGCTGGCCTAGCATCTCTAGGCCATGCTTCTCTTGAGAA
ACGCGCCACCGATGCATCTGCGTACTGCTCCGATTCATCGGGTACCTACA
AGCTCTCGTCGATCACGGCCCCAGTTCAGGGAAGTGGCAGCCCGGGCTCA
GCATCCACCTGGAAGCTAAGTATTGACGATACATCATCCGGTCACAAGCA
GGCAATCACTGGCTTCGGGGCTGCTGTGACCGATGCGACCGTCACGTCTT
TTAACACCTTGTCGAGCTCTACCCTCCAACAGCTCCTCAATGAGTTGATG
ACTTCCGATGGAGCTAATTTCTCTCTCATGCGCCATACCATCGGCGCGTC
TGATCTGTCCGGTGATCCGGTCTACACCTATGATGACAACGGAAACGAAG
CAGACCCCTCACTTTCCGGCTTCGGTCTCGGCGACCGTGGCACTGCTATG
GCGGAAATGTTGGCCACGATGAAATCGTTGCAGTCAGACCTGAAGGTGCT
TGGGTCCCCGTGGAGTGCGCCCGGATGGATGAAATTGAATGGCGTGATTG
ATGGCAACGCGACTGATAACAACCTTAACGATGGCTACCTTACCAGTGGT
GGCACGGGAAGCACCGGCTACTCCAGTGCTTTCGCGCAGTACTTCGTGAA
ATACATCCAAGCGTACGAAGCATTAGGAGCTACGGTCGATGCCATTACGA
TTCAGAATGAGCCGTTAAATAGTCAATCTGGATATCCCACCATGTATGTT
TACGACTATGAGTCTGCGCAGCTGATCCAAAAATACATTGGACCGGCTCT
TGCCGACGCTGGACTGAGCACGGAAATCTGGGCCTTCGATCACAATACTG
GCAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:GH30_7 |
| Note | CAZy:GH30_2 |
| Note | CAZy:GH30_1 |
| Note | CAZy:GH30 |
| Note | CAZy:GH30_3 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR033453 |
| DBxref | InterPro:IPR033452 |
| DBxref | PFAM:PF17189 |
| DBxref | PFAM:PF02055 |
| Product | 6-beta-D-glucanase neg1 |
| Product | Endo-1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000015.1 | supercontig | ACJE01000015.1:155633..157161 - |
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