You are here

Home

ASPNIDRAFT_46114-T1, ASPNIDRAFT_46114-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46114-T1
Unique NameASPNIDRAFT_46114-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000011.1:45220..46162+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46114-T1 ID=ASPNIDRAFT_46114-T1|Name=ASPNIDRAFT_46114-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=943bp|location=Sequence derived from alignment at ACJE01000011.1:45220..46162+ (Aspergillus niger ATCC 1015)
ATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCTTCTACTTGGGGTGA
GATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAATCCTTCTGAGAGCAA
GAGAGCTATGCCTCAGTGGGAATATCCAACAATTCCGCGACCTCATTGAC
TCGGCACAATCGTCATCGGAGAACTTTCATATAGAAGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGAGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCAACCAGA
TTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAGAAGGGATGGGATAT
CAACGAGCCAATGTGCGAGACCCAACCCCCGTCCTAGAGTGAGACCATAC
TCCAATCCTTCGCGAGATAACAATCTACTAATCCCTCTCAGCATTGCCAT
AGAGGACGAAGAGATGACGACTTGGTTCTTGGACCATGGAGCGGATCCTA
ATAGACGAACGTTCATAGACCTTACCCCGCTTTCGTGGGCTGTTGGAAGA
TCACCCGTTTCCGTGATCCGCCTCATGCTGGATTATTGCCAAGATATTCA
TCCAGGTCAGCTGCTTCATCATGCGGTTCAACGCGAATCTGACACTATCG
AAGTACTGGAAATGTTAATCCAGAAGGGAGCGCCTCTTAACACTCCCGTG
CACGAAGACCTTCCTACCTTATCGATTCTTTGCTTTATGCCTCTAGGAAC
TGCTCTGCACCGGGCATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATC
TCCTCAGCAAAGGAGCCGACCAGAGTGTCAGAGATAGTAATGGACTTACA
GCTATTGAACTGGCTGCTGGATTGAACCAGCAAGAAGTGGTTGAAGTGCT
GCAGAAACATAGAAACGGCGGAAATCCCGTTGACCACCCCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000011.1:45220..46162+

>ASPNIDRAFT_46114-T1 ID=ASPNIDRAFT_46114-T1|Name=ASPNIDRAFT_46114-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1728bp|location=Sequence derived from alignment at ACJE01000011.1:45220..46162+ (Aspergillus niger ATCC 1015)
ATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCTTCTACTTGGGGTGA
GATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAATCCTTCTGAGAGCAA
GAGAGCTATGCCTCAGTGGGAATATCCAACAATTCCGCGACCTCATTGAC
TCGGCACAATCGTCATCGGAGAACTTTCATATAGAAGACTTCGGTATTAT
CATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTTCATGCGGGAGCTGA
TGGATCGTGGCTTTCCCACGCATTCAATCTACGCCCGGAACGCAACCAGA
TTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAGAAGGGATGGGATAT
CAACGAGCCAATCATTGCCATAGAGGACGAAGAGATGACGACTTGGTTCT
TGGACCATGGAGCGGATCCTAATAGACGAACGTTCATAGACCTTACCCCG
CTTTCGTGGGCTGTTGGAAGATCACCCGTTTCCGTGATCCGCCTCATGCT
GGATTATTGCCAAGATATTCATCCAGGTCAGCTGCTTCATCATGCGGTTC
AACGCGAATCTGACACTATCGAAGTACTGGAAATGTTAATCCAGAAGGGA
GCGCCTCTTAACACTCCCGTGCACGAAGACCTTCCTACCTTATCGATTCT
TTGCTTTATGCCTCTAGGAACTGCTCTGCACCGGGCATGTGAGCTCGGAA
AAGTGGATGTGGTTCGCTATCTCCTCAGCAAAGGAGCCGACCAGAGTGTC
AGAGATAGTAATGGACTTACAGCTATTGAACTGGCTGCTGGATTGAACCA
GCAAGAAGTGGTTGAAGTGCTGCAGAAACATAGAAACGGCGGAAATCCCG
TTGACCACCCCTGAATGAACGTACAATCTGCTTCAGGCTCGGCTTCGCCT
TCTACTTGGGGTGAGATCTATCAAGTTCCAGGCCGGACCTCTCGGGAAAT
CCTTCTGAGAGCAAGAGAGCTATGCCTCAGTGGGAATATCCAACAATTCC
GCGACCTCATTGACTCGGCACAATCGTCATCGGAGAACTTTCATATAGAA
GACTTCGGTATTATCATGGGGCAGGCTGTCGAGCAAGACAGCGTGATCTT
CATGCGGGAGCTGATGGATCGTGGCTTTCCCACGCATTCAATCTACGCCC
GGAACGCAACCAGATTCAAATCCAAGAATGCCCTCGCTCTTCTTATTGAG
AAGGGATGGGATATCAACGAGCCAATCATTGCCATAGAGGACGAAGAGAT
GACGACTTGGTTCTTGGACCATGGAGCGGATCCTAATAGACGAACGTTCA
TAGACCTTACCCCGCTTTCGTGGGCTGTTGGAAGATCACCCGTTTCCGTG
ATCCGCCTCATGCTGGATTATTGCCAAGATATTCATCCAGGTCAGCTGCT
TCATCATGCGGTTCAACGCGAATCTGACACTATCGAAGTACTGGAAATGT
TAATCCAGAAGGGAGCGCCTCTTAACACTCCCGTGCACGAAGACCTTCCT
ACCTTATCGATTCTTTGCTTTATGCCTCTAGGAACTGCTCTGCACCGGGC
ATGTGAGCTCGGAAAAGTGGATGTGGTTCGCTATCTCCTCAGCAAAGGAG
CCGACCAGAGTGTCAGAGATAGTAATGGACTTACAGCTATTGAACTGGCT
GCTGGATTGAACCAGCAAGAAGTGGTTGAAGTGCTGCAGAAACATAGAAA
CGGCGGAAATCCCGTTGACCACCCCTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46114ASPNIDRAFT_46114Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46114-T1.exon1ASPNIDRAFT_46114-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46114-T1.exon2ASPNIDRAFT_46114-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46114-T1.cdsASPNIDRAFT_46114-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46114-T1ASPNIDRAFT_46114-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000011.1supercontigACJE01000011.1:45220..46162 +
Powered by Drupal