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ASPNIDRAFT_46255-T1, ASPNIDRAFT_46255-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46255-T1
Unique NameASPNIDRAFT_46255-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3656776..3658071-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46255-T1 ID=ASPNIDRAFT_46255-T1|Name=ASPNIDRAFT_46255-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1296bp|location=Sequence derived from alignment at ACJE01000004.1:3656776..3658071- (Aspergillus niger ATCC 1015)
ATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGTAAGTTACTGCGCCTCGACGCGCGATTCTTCGCATCTC
ACAATGAACAGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAA
TGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGG
GGCCGACGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCG
AGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGAT
CTGACCTCGTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGTGCA
GGTGTTCAGCATTGACGGGTCGACGTATCTTACTATGGAGGACATCACCA
TTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGATTT
GACATTGGCGATAGCACGTACATTACCATCACGGGCGCCAATGTATACAA
CCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGGTGGGTAGACCGTCCT
TTAAGCTACGGATGTGGACACTGATGGGAACCAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGATTCGGATATCAA
GAGCTCTCAGAACGGTAAGTTATATTCCGTCAAGGTTGTAGTTCGGTGCG
ATCACATGCTAAGCGGCGTATAGGAGTCCGCATCAAGACCATCTACGGCG
ACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGAT
ATCACCGACTATGGCATTGTGGTGGAGCAGAACTATGACGATACGAGCGA
GTCGCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGC
AGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCA
GACAGCTGCACGGACTGGACTTGGACGGATGTGGATGTGACTGGAGGGAA
GACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:3656776..3658071-

>ASPNIDRAFT_46255-T1 ID=ASPNIDRAFT_46255-T1|Name=ASPNIDRAFT_46255-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4548bp|location=Sequence derived from alignment at ACJE01000004.1:3656776..3658071- (Aspergillus niger ATCC 1015)
GAGTCCGCATCAAGACCATCTACGGCGACACTGGGTCGGTCAGTGAGGTC
ACCTACAAGGAGATCACCCTGTCCGATATCACCGACTATGGCATTGTGGT
GGAGCAGAACTATGACGATACGAGCGAGTCGCCGACCGATGGAATCACCA
TCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGC
ACCAACATCTACATCGTCTGCGGATCAGACAGCTGCACGGACTGGACTTG
GACGGATGTGGATGTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAATG
TGCCGGACGATATCAGCTGTTAGAACATTTACTTTTCGGGCGGCGTCTGC
TCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGTCGGAGTGACAA
CACCGTGAAGAACGTGACCTTCTACGATTCGGATATCAAGAGCTCTCAGA
ACGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGG
ACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCACCGGGGCCGACG
GCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGC
AATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTC
GTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGTGCAGGTGTTCA
GCATTGACGGGTCGACGTATCTTACTATGGAGGACATCACCATTGACAAC
ACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGATTTGACATTGG
CGATAGCACGTACATTACCATCACGGGCGCCAATGTATACAACCAAGATG
ACTGTGTGGCGGTGAACTCGGGCGAGATGGTGACTTCTAGCTCGGTGATC
GGCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCC
GCTGGTGACCCCCGCCCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCT
CCTGCACTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAG
ACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCAC
CACGTTGGATCTGACCGATCTGAACGACGGGACTCACGAGTCCGCATCAA
GACCATCTACGGCGACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGA
TCACCCTGTCCGATATCACCGACTATGGCATTGTGGTGGAGCAGAACTAT
GACGATACGAGCGAGTCGCCGACCGATGGAATCACCATCGAAGACTTTGT
CCTGGACAATGTGCAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACA
TCGTCTGCGGATCAGACAGCTGCACGGACTGGACTTGGACGGATGTGGAT
GTGACTGGAGGGAAGACCAGCTCCGACTGTGAGAATGTGCCGGACGATAT
CAGCTGTTAGAACATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACG
GGCTGTCGATCGGTTCCGTTGGCGGTCGGAGTGACAACACCGTGAAGAAC
GTGACCTTCTACGATTCGGATATCAAGAGCTCTCAGAACGGTCATCTTCG
AAGGCGAAACCACCTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCA
GTCTCCGGAACTGACATCACCGTCACCGGGGCCGACGGCGCCTATCTCAA
CGGTGACGGCAGTCGTTGGTGGGATGGCGAGGGCAGCAATGGCGGCAAGA
CGAAGCCCAAGTTCTTCTACGCCCATGATCTGACCTCGTCCACGATCAGC
GGTATCTACATCCAGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTC
GACGTATCTTACTATGGAGGACATCACCATTGACAACACGGATGGCGATG
ATGGCGAGGCGGCCAACACCGATGGATTTGACATTGGCGATAGCACGTAC
ATTACCATCACGGGCGCCAATGTATACAACCAAGATGACTGTGTGGCGGT
GAACTCGGGCGAGATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCT
GGGCCGCACTGGTCAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCC
GCCCCGAAGCTCGAGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTC
CGGCTCTGAGGGGGCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCA
CCATCGTGCTGTCCGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTG
ACCGATCTGAACGACGGGACTCACGAGTCCGCATCAAGACCATCTACGGC
GACACTGGGTCGGTCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGA
TATCACCGACTATGGCATTGTGGTGGAGCAGAACTATGACGATACGAGCG
AGTCGCCGACCGATGGAATCACCATCGAAGACTTTGTCCTGGACAATGTG
CAGGGCAGTGTGGAGAGCTCGGGCACCAACATCTACATCGTCTGCGGATC
AGACAGCTGCACGGACTGGACTTGGACGGATGTGGATGTGACTGGAGGGA
AGACCAGCTCCGACTGTGAGAATGTGCCGGACGATATCAGCTGTTAGAAC
ATTTACTTTTCGGGCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGG
TTCCGTTGGCGGTCGGAGTGACAACACCGTGAAGAACGTGACCTTCTACG
ATTCGGATATCAAGAGCTCTCAGAACGGTCATCTTCGAAGGCGAAACCAC
CTTCGGTTACGAGGAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTG
ACATCACCGTCACCGGGGCCGACGGCGCCTATCTCAACGGTGACGGCAGT
CGTTGGTGGGATGGCGAGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTT
CTTCTACGCCCATGATCTGACCTCGTCCACGATCAGCGGTATCTACATCC
AGAACTCGCCGGTGCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACT
ATGGAGGACATCACCATTGACAACACGGATGGCGATGATGGCGAGGCGGC
CAACACCGATGGATTTGACATTGGCGATAGCACGTACATTACCATCACGG
GCGCCAATGTATACAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAG
ATGGTGACTTCTAGCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGT
CAGTGCGAGCCCCGTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCG
AGGATCTGGAGAAGCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGG
GCCTCGTCTGCCAGCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTC
CGACGTGGCAGTGCCCTCAGGCACCACGTTGGATCTGACCGATCTGAACG
ACGGGACTCACGAGTCCGCATCAAGACCATCTACGGCGACACTGGGTCGG
TCAGTGAGGTCACCTACAAGGAGATCACCCTGTCCGATATCACCGACTAT
GGCATTGTGGTGGAGCAGAACTATGACGATACGAGCGAGTCGCCGACCGA
TGGAATCACCATCGAAGACTTTGTCCTGGACAATGTGCAGGGCAGTGTGG
AGAGCTCGGGCACCAACATCTACATCGTCTGCGGATCAGACAGCTGCACG
GACTGGACTTGGACGGATGTGGATGTGACTGGAGGGAAGACCAGCTCCGA
CTGTGAGAATGTGCCGGACGATATCAGCTGTTAGAACATTTACTTTTCGG
GCGGCGTCTGCTCTGGTGGCCACGGGCTGTCGATCGGTTCCGTTGGCGGT
CGGAGTGACAACACCGTGAAGAACGTGACCTTCTACGATTCGGATATCAA
GAGCTCTCAGAACGGTCATCTTCGAAGGCGAAACCACCTTCGGTTACGAG
GAATGGAGCGGACCTCTTGTCTCAGTCTCCGGAACTGACATCACCGTCAC
CGGGGCCGACGGCGCCTATCTCAACGGTGACGGCAGTCGTTGGTGGGATG
GCGAGGGCAGCAATGGCGGCAAGACGAAGCCCAAGTTCTTCTACGCCCAT
GATCTGACCTCGTCCACGATCAGCGGTATCTACATCCAGAACTCGCCGGT
GCAGGTGTTCAGCATTGACGGGTCGACGTATCTTACTATGGAGGACATCA
CCATTGACAACACGGATGGCGATGATGGCGAGGCGGCCAACACCGATGGA
TTTGACATTGGCGATAGCACGTACATTACCATCACGGGCGCCAATGTATA
CAACCAAGATGACTGTGTGGCGGTGAACTCGGGCGAGATGGTGACTTCTA
GCTCGGTGATCGGCCTAACGCTCTGGGCCGCACTGGTCAGTGCGAGCCCC
GTTGCCGATCCGCTGGTGACCCCCGCCCCGAAGCTCGAGGATCTGGAGAA
GCGCGCAACCTCCTGCACTTTCTCCGGCTCTGAGGGGGCCTCGTCTGCCA
GCAAGTCCAAGACCTCGTGCTCCACCATCGTGCTGTCCGACGTGGCAGTG
CCCTCAGGCACCACGTTGGATCTGACCGATCTGAACGACGGGACTCAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46255ASPNIDRAFT_46255Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46255-T1ASPNIDRAFT_46255-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46255-T1.cdsASPNIDRAFT_46255-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46255-T1.exon4ASPNIDRAFT_46255-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46255-T1.exon3ASPNIDRAFT_46255-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46255-T1.exon2ASPNIDRAFT_46255-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46255-T1.exon1ASPNIDRAFT_46255-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productpolygalacturonase-4 precursor (PG-IV)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3656776..3658071 -
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