You are here

Home

ASPNIDRAFT_46489-T1, ASPNIDRAFT_46489-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46489-T1
Unique NameASPNIDRAFT_46489-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2283318..2284082-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46489-T1 ID=ASPNIDRAFT_46489-T1|Name=ASPNIDRAFT_46489-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=765bp|location=Sequence derived from alignment at ACJE01000004.1:2283318..2284082- (Aspergillus niger ATCC 1015)
ATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTA
CCAAGAGCCCCCCGAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGC
CCAATTTGAATGCGAACTGGGTCAACGCCAAGGGTGAGTAGTGGCCACCT
CCATCTCCTCCATTTCCCCCCCCCATCATCACCACTCCGTCGCTGCAGAA
GGAGGGGTTCATGTTCCGGCGGGGGACTTGTAACCAACATATGTCCCCAT
GACATCCATGACACCCCCAGTGGCTGACCACGTTGTACTACCATTTAGGA
GCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGA
CATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATCA
GCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCT
TTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGAT
CGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTGC
CCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACG
TATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATT
GCCGTTTGTATGTATTATCCTTGCCTTCTGTGGTGGGGTGAGTCATGATT
GCTAACTGCTGTGTTAGTCGCACCGTCTGCGAATAGGTCTCTTCTCTGAT
ATACCCGAAGAGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2283318..2284082-

>ASPNIDRAFT_46489-T1 ID=ASPNIDRAFT_46489-T1|Name=ASPNIDRAFT_46489-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1620bp|location=Sequence derived from alignment at ACJE01000004.1:2283318..2284082- (Aspergillus niger ATCC 1015)
TCGCACCGTCTGCGAATAGGTCTCTTCTCTGATATACCCGAAGAGTAGGA
GCCTGGACCATCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGA
CATCATTCCCGGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATCA
GCTACATGTTCGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCT
TTTGAATTCAACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGAT
CGACAATGGAGATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTGC
CCATTTGTCTCTTCCTGCTTAGCACACATTATACCCACTACGACTTGACG
TATTTCACCATCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATT
GCCGTTTATGGCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTA
TCATCTACCAAGAGCCCCCCGAATCCATTGAGCACACCAGCGACCAGGCT
GCTCTGCCCAATTTGAATGCGAACTGGGTCAACGCCAAGGTCGCACCGTC
TGCGAATAGGTCTCTTCTCTGATATACCCGAAGAGTAGGAGCCTGGACCA
TCCACTTCGTTCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCC
GGTGTCTCGCAGGAGACTTCATGGACACTCACCAACATCAGCTACATGTT
CGGTTCTTTCCTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCA
ACGCCGGCGCGTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGA
GATCAGTATACGCCCACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCT
CTTCCTGCTTAGCACACATTATACCCACTACGACTTGACGTATTTCACCA
TCAATTTCCTTGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTATG
GCCCAGGGCAAGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCA
AGAGCCCCCCGAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGCCCA
ATTTGAATGCGAACTGGGTCAACGCCAAGGTCGCACCGTCTGCGAATAGG
TCTCTTCTCTGATATACCCGAAGAGTAGGAGCCTGGACCATCCACTTCGT
TCTCATCATCGCCCTCAAGATCTTGTTCGACATCATTCCCGGTGTCTCGC
AGGAGACTTCATGGACACTCACCAACATCAGCTACATGTTCGGTTCTTTC
CTCATGTTCCACTGGGTGCGGGGCATCCCTTTTGAATTCAACGCCGGCGC
GTACGACAACCTCAACATGTGGGAGCAGATCGACAATGGAGATCAGTATA
CGCCCACAAAGAAGTTCCTCCTCTGCGTGCCCATTTGTCTCTTCCTGCTT
AGCACACATTATACCCACTACGACTTGACGTATTTCACCATCAATTTCCT
TGCAACCCTGGGAGTTGTCATCCCGAAATTGCCGTTTATGGCCCAGGGCA
AGGCTGGACGGAGGAGACGGTCGAGTAGTATCATCTACCAAGAGCCCCCC
GAATCCATTGAGCACACCAGCGACCAGGCTGCTCTGCCCAATTTGAATGC
GAACTGGGTCAACGCCAAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005789endoplasmic reticulum membrane
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46489ASPNIDRAFT_46489Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46489-T1ASPNIDRAFT_46489-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46489-T1.cdsASPNIDRAFT_46489-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46489-T1.exon3ASPNIDRAFT_46489-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46489-T1.exon2ASPNIDRAFT_46489-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46489-T1.exon1ASPNIDRAFT_46489-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264F60
DBxrefInterPro:IPR007203
DBxrefPFAM:PF04061
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2283318..2284082 -
Powered by Drupal