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ASPNIDRAFT_46553-T1, ASPNIDRAFT_46553-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46553-T1
Unique NameASPNIDRAFT_46553-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1930751..1931516+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46553-T1 ID=ASPNIDRAFT_46553-T1|Name=ASPNIDRAFT_46553-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=766bp|location=Sequence derived from alignment at ACJE01000004.1:1930751..1931516+ (Aspergillus niger ATCC 1015)
ATGACAAGCGCAACAGCATCAACAACAACAACCCCACCCTTCCAATTCCC
CCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGA
CACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGC
CGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTCCCC
ATTATTCCATAACACGACGCTCCGAAAGCGCATATCGATGAGCGATGCGC
GGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGG
AAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTG
GTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTATGTA
TTCTTATATTCCGGATCATCATTCGAGATGTTGGAGGGGAGTTGGGGGTA
GAGTTGGGATTGAGGGGAGATAGTTGCTAATTGCTTATTTTTGCTGTATA
GGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGT
TGGAGGGGGAGGCCACGATGTCGCAAGGTAGGTTAAGTGGATTTGCTCCT
AATCATTGGGTGATGCTGGTATGGTATGGTGGCTAATGGTTTGGCTGGAA
TAGAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTT
CTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGG
TGTCAAGTTCTTCTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1930751..1931516+

>ASPNIDRAFT_46553-T1 ID=ASPNIDRAFT_46553-T1|Name=ASPNIDRAFT_46553-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1746bp|location=Sequence derived from alignment at ACJE01000004.1:1930751..1931516+ (Aspergillus niger ATCC 1015)
ATGACAAGCGCAACAGCATCAACAACAACAACCCCACCCTTCCAATTCCC
CCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCAACCCAACAGCACGA
CACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGATCCAATCCTGGTGC
CGACACCACCGCGTCTACCGACTATCGTTAATCGAAGCCATCGAGTCCCC
ATTATTCCATAACACGACGCTCCGAAAGCGCATATCGATGAGCGATGCGC
GGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGG
AAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGTGTTGCGTGGATTTG
GTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGCGGATTGGGTGGAAA
ACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATGAGTTGTTGGAGGGG
GAGGCCACGATGTCGCAAGAATGGCATGGGATGGACCCCGATGTGATGCA
CAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGCGCAGGTCTTCGGTA
GCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAGATGACAAGCGCAACAGCA
TCAACAACAACAACCCCACCCTTCCAATTCCCCCTCACCTACTCATTTCC
AGCCTTCTTCACCCCCCAACCCAACAGCACGACACGCACCTCCCAACTCC
AAAAATGGTCTTCCCTGATCCAATCCTGGTGCCGACACCACCGCGTCTAC
CGACTATCGTTAATCGAAGCCATCGAGTCCCCATTATTCCATAACACGAC
GCTCCGAAAGCGCATATCGATGAGCGATGCGCGGGATATTCTAGACTGGA
TGGCGAAAAGTGAAGAGGAGGGCGGTGGCGGGAAGAGAGCGGAGTGGATT
GATGGTGGGAGTAAGAGTGTTGCGTGGATTTGGTGGAAGAGGCCTGAGGA
GTGGGCAGGGTTGATTGCGGATTGGGTGGAAAACACTGGCCAGAAGAACG
TGGTGCTTACGGTTTATGAGTTGTTGGAGGGGGAGGCCACGATGTCGCAA
GAATGGCATGGGATGGACCCCGATGTGATGCACAAGTCCCTCAATGTTCT
CGTGAAACGGGGCAAGGCGCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTG
TCAAGTTCTTCTAGATGACAAGCGCAACAGCATCAACAACAACAACCCCA
CCCTTCCAATTCCCCCTCACCTACTCATTTCCAGCCTTCTTCACCCCCCA
ACCCAACAGCACGACACGCACCTCCCAACTCCAAAAATGGTCTTCCCTGA
TCCAATCCTGGTGCCGACACCACCGCGTCTACCGACTATCGTTAATCGAA
GCCATCGAGTCCCCATTATTCCATAACACGACGCTCCGAAAGCGCATATC
GATGAGCGATGCGCGGGATATTCTAGACTGGATGGCGAAAAGTGAAGAGG
AGGGCGGTGGCGGGAAGAGAGCGGAGTGGATTGATGGTGGGAGTAAGAGT
GTTGCGTGGATTTGGTGGAAGAGGCCTGAGGAGTGGGCAGGGTTGATTGC
GGATTGGGTGGAAAACACTGGCCAGAAGAACGTGGTGCTTACGGTTTATG
AGTTGTTGGAGGGGGAGGCCACGATGTCGCAAGAATGGCATGGGATGGAC
CCCGATGTGATGCACAAGTCCCTCAATGTTCTCGTGAAACGGGGCAAGGC
GCAGGTCTTCGGTAGCGAAGGCCAGGAGGGTGTCAAGTTCTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000814ESCRT II complex
Vocabulary: Biological Process
TermDefinition
GO:0071985multivesicular body sorting pathway
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46553ASPNIDRAFT_46553Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46553-T1.exon1ASPNIDRAFT_46553-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46553-T1.exon2ASPNIDRAFT_46553-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46553-T1.exon3ASPNIDRAFT_46553-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46553-T1.cdsASPNIDRAFT_46553-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46553-T1ASPNIDRAFT_46553-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR008570
DBxrefInterPro:IPR014041
DBxrefInterPro:IPR036388
DBxrefPFAM:PF05871
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1930751..1931516 +
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