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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:1844054..1844830+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_46576-T1 ID=ASPNIDRAFT_46576-T1|Name=ASPNIDRAFT_46576-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=777bp|location=Sequence derived from alignment at ACJE01000004.1:1844054..1844830+ (Aspergillus niger ATCC 1015)
ATGGATTACCAGGTAAGCACAATTATATTCTTTATATACAGACCACATTA
CTAACAAAACCCCCCTAAACAGAACCGCGCCGGTTCCAAATTTGGCGGCG
GCGGCGTCGCCTCCCACTCCGCAACGAACGCCGACCGACGCGAACGCCTC
CGCAAACTGGCCCTGGAAACGATCGACCTCGACAAAGACCCCTACTTCTT
CAAGAACCACGTCGGCAGCTTCGAATGCAGACTATGTCTCACAGTGCACC
AAAACGACGGGTCCTACCTAGCGCACACGCAGGGGCGGAAACATCAAACG
AACCTTGCGCGGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGAACCAAGA
CCCGTCGTCCATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAGCAGACGA
TCAAGATCGGACGGCCGGGGTACAAGATCACGAAGATTCGGGATCCGTTG
ACGAGACAGCTGGGCATGTTGTTCCAGTTGCAGTATCAGGAGATTACGCC
GGGGGTTACGCCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAGAAGGTGG
AGGAGCCGCCGGACAAGAACTTTCAGTATTTGGTTGTTGCGGCGGAGCCG
TATCAGACTTGTGGGTTTAAGTTGCAGGCGAGGGAGATTGATCGGCGCGA
GGGACGGTATTGGACTTGGTTTGATGAGGATAGTAAGGAGTTTTGGGTCC
AGATTATGTTCAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGTGCCGGGG
TTGGCGCCTATTGAAAATAAGGCTTGA back to topCoding sequence (CDS) from alignment at ACJE01000004.1:1844054..1844830+ >ASPNIDRAFT_46576-T1 ID=ASPNIDRAFT_46576-T1|Name=ASPNIDRAFT_46576-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1434bp|location=Sequence derived from alignment at ACJE01000004.1:1844054..1844830+ (Aspergillus niger ATCC 1015)
ATGGATTACCAGAACCGCGCCGGTTCCAAATTTGGCGGCGGCGGCGTCGC
CTCCCACTCCGCAACGAACGCCGACCGACGCGAACGCCTCCGCAAACTGG
CCCTGGAAACGATCGACCTCGACAAAGACCCCTACTTCTTCAAGAACCAC
GTCGGCAGCTTCGAATGCAGACTATGTCTCACAGTGCACCAAAACGACGG
GTCCTACCTAGCGCACACGCAGGGGCGGAAACATCAAACGAACCTTGCGC
GGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGAACCAAGACCCGTCGTCC
ATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAGCAGACGATCAAGATCGG
ACGGCCGGGGTACAAGATCACGAAGATTCGGGATCCGTTGACGAGACAGC
TGGGCATGTTGTTCCAGTTGCAGTATCAGGAGATTACGCCGGGGGTTACG
CCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAGAAGGTGGAGGAGCCGCC
GGACAAGAACTTTCAGTATTTGGTTGTTGCGGCGGAGCCGTATCAGACTT
GTGGGTTTAAGTTGCAGGCGAGGGAGATTGATCGGCGCGAGGGACGGTAT
TGGACTTGGTTTGATGAGGATAGTAAGGAGTTTTGGGTCCAGATTATGTT
CAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGTGCCGGGGTTGGCGCCTA
TTGAAAATAAGGCTTGAATGGATTACCAGAACCGCGCCGGTTCCAAATTT
GGCGGCGGCGGCGTCGCCTCCCACTCCGCAACGAACGCCGACCGACGCGA
ACGCCTCCGCAAACTGGCCCTGGAAACGATCGACCTCGACAAAGACCCCT
ACTTCTTCAAGAACCACGTCGGCAGCTTCGAATGCAGACTATGTCTCACA
GTGCACCAAAACGACGGGTCCTACCTAGCGCACACGCAGGGGCGGAAACA
TCAAACGAACCTTGCGCGGCGCGCGGCGCGCGAACAGCGCGAGGGCAAGA
ACCAAGACCCGTCGTCCATTCCCGGGGCGATGGGCGTGCAGGTCAAGAAG
CAGACGATCAAGATCGGACGGCCGGGGTACAAGATCACGAAGATTCGGGA
TCCGTTGACGAGACAGCTGGGCATGTTGTTCCAGTTGCAGTATCAGGAGA
TTACGCCGGGGGTTACGCCTAAGGTGCGGTTTATGTCGGCGTTTGAGCAG
AAGGTGGAGGAGCCGCCGGACAAGAACTTTCAGTATTTGGTTGTTGCGGC
GGAGCCGTATCAGACTTGTGGGTTTAAGTTGCAGGCGAGGGAGATTGATC
GGCGCGAGGGACGGTATTGGACTTGGTTTGATGAGGATAGTAAGGAGTTT
TGGGTCCAGATTATGTTCAAGACGGAGAGAGAGGAGAGGTTCTCGGGTGT
GCCGGGGTTGGCGCCTATTGAAAATAAGGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092653YS |
| DBxref | InterPro:IPR000690 |
| DBxref | InterPro:IPR031781 |
| DBxref | InterPro:IPR003604 |
| DBxref | PFAM:PF12874 |
| DBxref | PFAM:PF16835 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:1844054..1844830 + |
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