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ASPNIDRAFT_46660-T1, ASPNIDRAFT_46660-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46660-T1
Unique NameASPNIDRAFT_46660-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1379777..1382473-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46660-T1 ID=ASPNIDRAFT_46660-T1|Name=ASPNIDRAFT_46660-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2697bp|location=Sequence derived from alignment at ACJE01000004.1:1379777..1382473- (Aspergillus niger ATCC 1015)
ATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTACTCCGCC
CCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAACGCTCAC
CTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCCGGGTGAT
TCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAACGCGCGAT
TGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAGAAGCAGG
AGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGCGGCTAAA
GCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCTATATTCC
TCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAGACCAGCA
AGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGATCAACGGT
CTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCCCGGAGCT
TTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGAAGTATCA
TGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGCCGCCATG
GCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGTTGCTCAA
CCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGACAAGGCAG
TCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCAGCAGGTC
GCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTCACAAGCC
CACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAGGTTGGTC
AGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTTTGATCAA
TTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTACAGTATAT
GATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGACAACCCGG
CGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAATAACGCAT
CAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCAATATCTT
CAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAGAAATTGA
AGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGACGAAGAC
GAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGAAGATGGA
CATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGGACGATAT
ACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCACAAGCTG
ATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGTCAATGAT
CATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTACGGCTTGA
TCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCTCTTCGAA
GCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGACAAACCG
ACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAATGACGCGA
TTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGAGACGACA
TCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCGGAGAACA
CCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATCCTGCGTC
CCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACACGCGCTTC
TCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGGAGGACAT
GCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCATTGCCCC
AACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATCTCACCCA
ACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCCGCTCCTA
CTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGCTCCGTCA
GCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACGCCGCAGC
TACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGCCCAAATC
CCGCCGACGCTCCGTCTCATACAGTCGATCCCCCCGCAGAAGATCCTCCG
TGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTACGATTCC
CGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGCCTCGCAG
CAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGATCCGTCT
CCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGCCGCTCGG
TACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCGTCTCCGC
GTCTCGCTCTCCTTCCCGTTCTCGTTCTCGTACTCCGGAGCGTCGTGCCC
CGCCTGGTCGTCGTGCCCCCCGTGATGCTTCAGTCTCGCGCTCGCGCTCC
CCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTGCCCCTCGTCG
TCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCGCCGCCGAGAC
GGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCGCGATTAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1379777..1382473-

>ASPNIDRAFT_46660-T1 ID=ASPNIDRAFT_46660-T1|Name=ASPNIDRAFT_46660-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5286bp|location=Sequence derived from alignment at ACJE01000004.1:1379777..1382473- (Aspergillus niger ATCC 1015)
TCTCGCGCTCGCGCTCCCCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGC
GATGCTGCCCCTCGTCGTCGTCGCTACTCTGACTCGTTGTCTCCGTCGCG
GTCTCCGCCGCCGAGACGGCACAGGTCTCCGTCTAGAACGCCTCCCCGTC
GGGTGCGCGATTAGATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGA
GTGCCTACTCCGCCCCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTC
CCGCAAACGCTCACCTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCT
CGCCCCCGGGTGATTCACTAAAAGACGGTGCGGATGCACCGCGCATCGAT
CCTGAACGCGCGATTGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCA
ACATGAGAAGCAGGAGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGC
AGGCTGCGGCTAAAGCAGAATATGAGAAGCTTTTGAACATGCGATCGGGT
GGTACCTATATTCCTCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTAC
GGACAAGACCAGCAAGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGA
AGTCGATCAACGGTCTCATCAACAAGGTCAACGTTTCCAACATCAAGTTT
ATCGTCCCGGAGCTTTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTT
TTGCAGAAGTATCATGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTA
TCTACGCCGCCATGGCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGC
GAGCTGTTGCTCAACCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAG
AAACGACAAGGCAGTCTGCATATCTTCCACGACCTTCATTGCCCATCTGT
GCAACCAGCAGGTCGCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTG
CTGCTTCACAAGCCCACGGATGACAGTGTCGAGATTGCTGTCGGCCTGAC
TCGAGAGGTTGGTCAGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGG
CGGTGTTTGATCAATTCCGAAATATCCTTCACGAAGCCGACATCGACAAG
CGAGTACAGTATATGATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTA
TAAGGACAACCCGGCGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAG
ACCAAATAACGCATCAGATCGGACTCGATGACGAGATTGAGACACAAGAT
TCCCTCAATATCTTCAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGC
CTACAAGAAATTGAAGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGG
AGGACGACGAAGACGAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAA
GAGCGGAAGATGGACATTAAAGACCAGACCAACACAGACCTCGTGAACCT
GCGGAGGACGATATACCTGACGATCATGTCGAGTATCGATTTCGAAGAAT
GCTGTCACAAGCTGATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAG
CTCCCGTCAATGATCATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAA
GTTCTACGGCTTGATCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGT
CCGATCTCTTCGAAGCTGCATTTGCCAAGTACTACGACACCATCCATCGC
TACGAGACAAACCGACTCCGCAATATTGCCCGCTTCTTCGGCCATATGAT
TAGCAATGACGCGATTGGCTGGCATGTCATGTCGATCATCCACATGAACG
AGGAGGAGACGACATCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAA
GACCTCGGAGAACACCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGA
CGAGATCCTGCGTCCCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCC
GCAACACGCGCTTCTCAATCAACTACTTCACCAGTATCGGCATGGGTATG
CTGACGGAGGACATGCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGAT
GCCTGCATTGCCCCAACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCG
TGGTATCTCACCCAACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCC
CGCTCCCGCTCCTACTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCG
CAGACGCTCCGTCAGCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGAT
CCTCACGCCGCAGCTACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCC
CCGGCGCCCAAATCCCGCCGACGCTCCGTCTCATACAGTCGATCCCCCCG
CAGAAGATCCTCCGTGTCCCCAACACCCCCTCCTCGCCGGACACGCGATC
GCTCCTACGATTCCCGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACC
CCTCCGCCTCGCAGCAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTA
CTCCAGATCCGTCTCCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCG
GAGGTGCCGCTCGGTACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAA
AGGAGCGTCTCCGCGTCTCGCTCTCCTTCCCGTTCTCGTTCTCTCTCGCG
CTCGCGCTCCCCTACCCCGCCGCGCGGTGGTGGTCGTCGTGGCGATGCTG
CCCCTCGTCGTCGTCGCTACTCTGACTCGTTGTCTCCGTCGCGGTCTCCG
CCGCCGAGACGGCACAGGTCTCCGTCTAGAACGCCTCCCCGTCGGGTGCG
CGATTAGATGACGGACCCTGTTGTCTTGCAGTCGGCGGTGCGAGTGCCTA
CTCCGCCCCCAGGCACTTCCTACTCTCCTCAGGCCTCGGGTTCCCGCAAA
CGCTCACCTCCCTCTCGGTCTCCTTCGCCGAATCGTCGTCGCTCGCCCCC
GGGTGATTCACTAAAAGACGGTGCGGATGCACCGCGCATCGATCCTGAAC
GCGCGATTGAAAGAGAGCGACAGCTCGCCGAGCGCCTTCGCCAACATGAG
AAGCAGGAGGCTGCTCGAAAGCCAATGACGGAGGAGGAAAAGCAGGCTGC
GGCTAAAGCAGAATATGAGAAGCTTTTGAACATGCGATCGGGTGGTACCT
ATATTCCTCCTGCGCGACTACGGGCGCTGCAGGCGCAGATTACGGACAAG
ACCAGCAAGGAGTACCAGCGGATGGCATGGGAGGCTCTTAAGAAGTCGAT
CAACGGTCTCATCAACAAGGTCAACGTTTCCAACATCAAGTTTATCGTCC
CGGAGCTTTTTGGGGAGAACTTGGTGCGCGGTCGCGGTCTGTTTTGCAGA
AGTATCATGAAAGCTCAGGCGGCCAGTTTGCCCTTCACACCTATCTACGC
CGCCATGGCGGCTATTGTGAACACCAAACTGCCCCAAGTCGGCGAGCTGT
TGCTCAACCGTCTCATTGTCCAGTTCCGAAAGGCGTTCAAGAGAAACGAC
AAGGCAGTCTGCATATCTTCCACGACCTTCATTGCCCATCTGTGCAACCA
GCAGGTCGCGCACGAGATGCTGGCCGCGCAGATTCTTCTTTTGCTGCTTC
ACAAGCCCACGGATGACAGTGTCGAGATTGCTGTCGGCCTGACTCGAGAG
GTTGGTCAGCATCTGGAGGAGATGAGCGGTCCTATTGCCCTGGCGGTGTT
TGATCAATTCCGAAATATCCTTCACGAAGCCGACATCGACAAGCGAGTAC
AGTATATGATTGAGGTGTTGTTCCAGGTCCGGAAAGATAGGTATAAGGAC
AACCCGGCGATCAAGGAAGAATTGGACCTGATCGAGGAGGAAGACCAAAT
AACGCATCAGATCGGACTCGATGACGAGATTGAGACACAAGATTCCCTCA
ATATCTTCAAGTACGATGCCGAATGGGAGGAGCACGAAGAGGCCTACAAG
AAATTGAAGGCAGAGATTCTGGGTGAAGGAAGTGATGACGAGGAGGACGA
CGAAGACGAGTCAGACGAGAGCTCCGATGAAGAGTCGGAGGAAGAGCGGA
AGATGGACATTAAAGACCAGACCAACACAGACCTCGTGAACCTGCGGAGG
ACGATATACCTGACGATCATGTCGAGTATCGATTTCGAAGAATGCTGTCA
CAAGCTGATGAAGATCTCGCTGCCCGCTGGCCTCGAGCCCGAGCTCCCGT
CAATGATCATCGAGTGTTGCTCCCAGGAGCGCACGTATTCGAAGTTCTAC
GGCTTGATCGGAGAGCGCTTCGCAAAGATCAACCGGCTCTGGTCCGATCT
CTTCGAAGCTGCATTTGCCAAGTACTACGACACCATCCATCGCTACGAGA
CAAACCGACTCCGCAATATTGCCCGCTTCTTCGGCCATATGATTAGCAAT
GACGCGATTGGCTGGCATGTCATGTCGATCATCCACATGAACGAGGAGGA
GACGACATCAAGCAGCCGTATCTTCATCAAGATCCTCTTCCAAGACCTCG
GAGAACACCTGGGCCTGCCCAAACTGCAGGAACGCATGCGGGACGAGATC
CTGCGTCCCAGCTTCGAGGGCCTCTTCCCACTGGACAATCCCCGCAACAC
GCGCTTCTCAATCAACTACTTCACCAGTATCGGCATGGGTATGCTGACGG
AGGACATGCGCGAGCACCTAAAAAACCTCCCCAAGCCCACGATGCCTGCA
TTGCCCCAACGCGATGCCGGCGCCGACTCCGACTCCGAGTCCGTGGTATC
TCACCCAACCAGCTGCTCAACCTGTACTCCTCGCTCTCGCTCCCGCTCCC
GCTCCTACTCCTACTCCCGCTCTCCTTCCCCCGGCCGTGGCCGCAGACGC
TCCGTCAGCCGCGGCCGATCCTACAGCCGCTCCGTGTCCGGATCCTCACG
CCGCAGCTACAGCTACACCCCTTCGCGGTCCAGGTCCCGATCCCCGGCGC
CCAAATCCCGCCGACGCTCCGTCTCATACAGTCGATCCCCCCGCAGAAGA
TCCTCCGTGTCCCCAACACCCCCTCCTCGCCGGACACGCGATCGCTCCTA
CGATTCCCGCTCTCCCAGACGCTCGCTCTCCCGGTCCGTCACCCCTCCGC
CTCGCAGCAAGCGAGATACCCACGCCCGCCGAGACAGAAGCTACTCCAGA
TCCGTCTCCCGATCTGTCTCCCCTCCTCCACGTCAGGCTGCCGGAGGTGC
CGCTCGGTACTCGGAGTCTCCTCCTCCCCGCCGGCGGGTCGAAAGGAGCG
TCTCCGCGTCTCGCTCTCCTTCCCGTTCTCGTTCTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC22ASPNIDRAFT_46660Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46660-T1ASPNIDRAFT_46660-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46660-T1.cdsASPNIDRAFT_46660-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46660-T1.exon2ASPNIDRAFT_46660-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46660-T1.exon1ASPNIDRAFT_46660-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09263WM5
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR003890
DBxrefInterPro:IPR003891
DBxrefPFAM:PF02847
Productpre-mRNA-splicing factor cwc22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1379777..1382473 -
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