You are here

Home

ASPNIDRAFT_46884-T1, ASPNIDRAFT_46884-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46884-T1
Unique NameASPNIDRAFT_46884-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:46151..47238-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46884-T1 ID=ASPNIDRAFT_46884-T1|Name=ASPNIDRAFT_46884-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1088bp|location=Sequence derived from alignment at ACJE01000004.1:46151..47238- (Aspergillus niger ATCC 1015)
ATGCCATCCAAACCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCA
AGAGTTAGACCCATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTG
GTGACTACTTCCCCAGAGAACCAAGTCCGCCATCGGCACGCGAGCCCATC
GCCGGGGGTGGTCGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAG
TTGGGATTCCTGGTGTATGGCTAAGTATATGCAAGCTATTGTGATAATAG
CAAGAATTTACTCTTTTCCTAGAAGCTAACAGTGGCCTCAAATTCTCCAG
TATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTGCA
TTGCATTGGGCCAATACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCC
CGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTATCAATCTCCGG
GCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGTCT
GGAATTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCTCGACTCTATGG
CGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGGCCTCGGATGA
GCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCCAT
GTGCTCGTCAACCGCATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGG
AGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCCCCCGCACTCT
GGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTC
GGCGGCTGGGCTGCATGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGA
ACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGAGCCTCGGAAA
GTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACGGC
ATTGCCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCCCTGGGAATCAT
CGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGATGGAATGAGA
TCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:46151..47238-

>ASPNIDRAFT_46884-T1 ID=ASPNIDRAFT_46884-T1|Name=ASPNIDRAFT_46884-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2004bp|location=Sequence derived from alignment at ACJE01000004.1:46151..47238- (Aspergillus niger ATCC 1015)
TATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTGCA
TTGCATTGGGCCAATACCTCTCTCATCCCTCTGGCTACTCGATCTGTGCC
CGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTATCAATCTCCGG
GCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGTCT
GGAATTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCTCGACTCTATGG
CGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGGCCTCGGATGA
GCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCCAT
GTGCTCGTCAACCGCATCACTCCGTTGATGGTTGATGGGGGAAGCTCGGG
AGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCCCCCGCACTCT
GGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCGTC
GGCGGCTGGGCTGCATGGATGGGCTGGAGAGTGACAACGGTCCGGAAGGA
ACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGAGCCTCGGAAA
GTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACGGC
ATTGCCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCCCTGGGAATCAT
CGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGATGGAATGAGA
TCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGAATGCCATCCAAA
CCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCAAGAGTTAGACCC
ATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACTACTTCC
CCAGAGAACCAAGTCCGCCATCGGCACGCGAGCCCATCGCCGGGGGTGGT
CGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGGGATTCCTG
GTTATCTGCGTTCCAACGATACTCGACGTATCCACCGACCCTATTCTTTG
CATTGCATTGGGCCAATACCTCTCTCATCCCTCTGGCTACTCGATCTGTG
CCCGACAGCGAGAGCTTCCTGCTTCTCACCAGACCCGTCTATCAATCTCC
GGGCCTCGAACATCTCGTTCTGACCGCGCCTGTTCTGATTCATATTGCGT
CTGGAATTGCTTTGCGCAACATCCGCTCCGCACGGCGGGCTCGACTCTAT
GGCGCCGAGACAAGGTCACAGAGACACTCCTTGACGTTTTGGCCTCGGAT
GAGCCTCCAAGCTCGGTTAGGATATTCCTTAGTTCCGTTACTCGGCGTCC
ATGTGCTCGTCAACCGCATCACTCCGTTGATGGTTGATGGGGGAAGCTCG
GGAGTCGGGCTGGGTTATGTGGCCCACGGCTTTGCACGGGCCCCCGCACT
CTGGAATCTGTACTATTTGTTATTCGTCGCCGTTGGGGTGTGGCACTTCG
TCGGCGGCTGGGCTGCATGGATGGGCTGGAGAGTGACAACGGTCCGGAAG
GAACGTGACCGAAAGAAAGGCTCCCTAGAGGGTTATCTGGGAGCCTCGGA
AAGTGAGCAACGACTCCGCCGACAGAGGAAGATGTGGTGGACGGTCAACG
GCATTGCCGCGGTGGGAGCATCCATATGGCTTGCAGGTGCCCTGGGAATC
ATCGGGCGTACGGGGCAGGGTTATGGCTGGGAGGCCAAGGGATGGAATGA
GATCTACAGCCAGGTCCCCGTTATTGGGTCCTGGCTCTGAATGCCATCCA
AACCAGAGGATATCGAAACGCGCTCCATATTTTCAATGCAAGAGTTAGAC
CCATCACCAGTACAAGATGAGTTTCCAGACCTTGAATCTGGTGACTACTT
CCCCAGAGAACCAAGTCCGCCATCGGCACGCGAGCCCATCGCCGGGGGTG
GTCGGTTCTCGTCGCTCAAGTTAGGCCTTCGCGGACATAGTTGGGATTCC
TGGT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46884ASPNIDRAFT_46884Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46884-T1ASPNIDRAFT_46884-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46884-T1.cdsASPNIDRAFT_46884-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46884-T1.exon2ASPNIDRAFT_46884-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46884-T1.exon1ASPNIDRAFT_46884-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012472
DBxrefInterPro:IPR034804
DBxrefPFAM:PF07950
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:46151..47238 -
Powered by Drupal