You are here

Home

ASPNIDRAFT_47000-T1, ASPNIDRAFT_47000-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47000-T1
Unique NameASPNIDRAFT_47000-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1532451..1533851+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47000-T1 ID=ASPNIDRAFT_47000-T1|Name=ASPNIDRAFT_47000-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1401bp|location=Sequence derived from alignment at ACJE01000010.1:1532451..1533851+ (Aspergillus niger ATCC 1015)
ATGACATCCTCTCTCTCACCGTCGCCTACAATCCTTGTCCCTCACCTTCC
ACCAAAGACCTTTGTCGGCATCGACCTAATAACCTTCACCTCCACCCCCA
ACTTCCACGGCATCCGCGACCTCCCCTCAGGATGGCACTTCCTCTACACC
GGAACAACAGAAAGTCTATCCCTCCGCAGCGGCGGCTGGTTCTATGTCGG
TGACATAACCAAATTCGACGAAGCCCAAGCTGGCAGCGTCGCGCTCACCA
CCCCCTCGCACCCCGGCGCAGACATAATCGTCTGGAAATGGAACACCGAC
ACCGAGACCCTAGCCCCATTAACCATCGACAGCGACGCAGACAAACAAGA
AGCGATGCGCCACAAAGCGAACCTGGGAGCTATATGGCAAAGGGGTGGAT
TATTCCGGTACCGCAGTCGGGTCTCACCGGCGGCTTTGGCGCAACAGAAT
GCTGGACATCCGGTACAACTTGAAATCGACGAGGAGGATGAGGAAGAAGG
AAGACAGACCTGGAAGGAACTGACGGATAAATTGACGCCGCGGCTTTTGA
CGCGCGTTGTGGGCGATCCGGCTCTGGATGTGGATGGTCGGCCGCGGTGG
ATGGTTACGTCTGCTAGCTCGGCGCAGAGGGATACGGATGTTATACCTGG
GCTTATGGATTCGGCGGAGGCGACGGAGGAATTAGAGAAGGTTACGGGGG
AGAAGGAGAGCGAGTTCTCGTTTCTGCCGATTGATTTGAAGAGGACGTGG
CGGGAGGGGGCTATTGGGCGTGAGAGGACGGAGGCGGCGCAGGATCGCTC
GTGGGCGTTGGGTGACTTGATACATCGGGTTTCTGCGGATGCTGGGGGGG
ATGAAAGTGTTGGGGAGGCTCAGGTGCTTGGGGAGCTGCAGTTTGCGTTC
TTGATGATCTTGACGCTCATGAATTACTCTTGCCTCCAGCAGTGGAAGAG
GCTGCTGGAGTTGGTTCTGACGTGTCGGGCGGCTATACGGGACAGAGAGG
CCTTGTTGGCTGGGGTGTTGAGGTTGCTTTTACTGCAGCTCAAGAGATGT
GATGATGTTGAAGGGGGGCTGTTCGATCTTGATGGTGAGGAAGGTGGTGA
GTTCCTACGAAGACTACTGGTGAAGTTTAGACGGTCGCTTCATGAGATCG
TCGATGGAACTGAGTCAATGGTGAAGACTGAGTTTGACAAGCTCGAGGCT
TGGGTCAAGGAGGAATATGATTGGGAGCTGAACCGTGAAGTCTTTGTTCG
ACGGGGTATGGTTCAATTGGAGGATGGTGAAGAAGTGGAGCTTGATATGC
ATGATGATGATGAAGACGACGAACTAGGAGAGTATGCTCCGATGGTGGTA
GATCTGGGAGACAATCCCTCGCAGGATCGTGTAGATATGGGAGAGGCTTG
A
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1532451..1533851+

>ASPNIDRAFT_47000-T1 ID=ASPNIDRAFT_47000-T1|Name=ASPNIDRAFT_47000-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1401bp|location=Sequence derived from alignment at ACJE01000010.1:1532451..1533851+ (Aspergillus niger ATCC 1015)
ATGACATCCTCTCTCTCACCGTCGCCTACAATCCTTGTCCCTCACCTTCC
ACCAAAGACCTTTGTCGGCATCGACCTAATAACCTTCACCTCCACCCCCA
ACTTCCACGGCATCCGCGACCTCCCCTCAGGATGGCACTTCCTCTACACC
GGAACAACAGAAAGTCTATCCCTCCGCAGCGGCGGCTGGTTCTATGTCGG
TGACATAACCAAATTCGACGAAGCCCAAGCTGGCAGCGTCGCGCTCACCA
CCCCCTCGCACCCCGGCGCAGACATAATCGTCTGGAAATGGAACACCGAC
ACCGAGACCCTAGCCCCATTAACCATCGACAGCGACGCAGACAAACAAGA
AGCGATGCGCCACAAAGCGAACCTGGGAGCTATATGGCAAAGGGGTGGAT
TATTCCGGTACCGCAGTCGGGTCTCACCGGCGGCTTTGGCGCAACAGAAT
GCTGGACATCCGGTACAACTTGAAATCGACGAGGAGGATGAGGAAGAAGG
AAGACAGACCTGGAAGGAACTGACGGATAAATTGACGCCGCGGCTTTTGA
CGCGCGTTGTGGGCGATCCGGCTCTGGATGTGGATGGTCGGCCGCGGTGG
ATGGTTACGTCTGCTAGCTCGGCGCAGAGGGATACGGATGTTATACCTGG
GCTTATGGATTCGGCGGAGGCGACGGAGGAATTAGAGAAGGTTACGGGGG
AGAAGGAGAGCGAGTTCTCGTTTCTGCCGATTGATTTGAAGAGGACGTGG
CGGGAGGGGGCTATTGGGCGTGAGAGGACGGAGGCGGCGCAGGATCGCTC
GTGGGCGTTGGGTGACTTGATACATCGGGTTTCTGCGGATGCTGGGGGGG
ATGAAAGTGTTGGGGAGGCTCAGGTGCTTGGGGAGCTGCAGTTTGCGTTC
TTGATGATCTTGACGCTCATGAATTACTCTTGCCTCCAGCAGTGGAAGAG
GCTGCTGGAGTTGGTTCTGACGTGTCGGGCGGCTATACGGGACAGAGAGG
CCTTGTTGGCTGGGGTGTTGAGGTTGCTTTTACTGCAGCTCAAGAGATGT
GATGATGTTGAAGGGGGGCTGTTCGATCTTGATGGTGAGGAAGGTGGTGA
GTTCCTACGAAGACTACTGGTGAAGTTTAGACGGTCGCTTCATGAGATCG
TCGATGGAACTGAGTCAATGGTGAAGACTGAGTTTGACAAGCTCGAGGCT
TGGGTCAAGGAGGAATATGATTGGGAGCTGAACCGTGAAGTCTTTGTTCG
ACGGGGTATGGTTCAATTGGAGGATGGTGAAGAAGTGGAGCTTGATATGC
ATGATGATGATGAAGACGACGAACTAGGAGAGTATGCTCCGATGGTGGTA
GATCTGGGAGACAATCCCTCGCAGGATCGTGTAGATATGGGAGAGGCTTG
A
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47000ASPNIDRAFT_47000Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47000-T1.exon1ASPNIDRAFT_47000-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47000-T1.cdsASPNIDRAFT_47000-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47000-T1ASPNIDRAFT_47000-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033647
DBxrefInterPro:IPR033648
DBxrefInterPro:IPR038514
DBxrefInterPro:IPR007946
DBxrefPFAM:PF05282
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1532451..1533851 +
Powered by Drupal