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ASPNIDRAFT_47046-T1, ASPNIDRAFT_47046-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47046-T1
Unique NameASPNIDRAFT_47046-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1968923..1969734+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47046-T1 ID=ASPNIDRAFT_47046-T1|Name=ASPNIDRAFT_47046-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=812bp|location=Sequence derived from alignment at ACJE01000010.1:1968923..1969734+ (Aspergillus niger ATCC 1015)
ATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTGGTACGAAGGA
GATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAGACCAGTAAGT
TTGATCCTCGATCTCCGTCCACCCATCGACTATGGCAATGTAAAAACTAA
CATGTTGCGTTAGCAATCCTCTACAAATTGAAGCTCACCAATCAGGACGT
CACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGA
ATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCC
CTCTGGAGACACTACTATTCTGGTACTTTTCCCCTTATCGCGTATTTTCA
ACGAATCGTGGGGCAAGTGGCTGACATTGGGTGAAATCTTCAGGTACACA
AGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTCGTTTGGAGGAGG
CTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAAATGAAGGATGCT
CTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGGCCGTAAGTTTCC
ACCTTTAGGTTATAGATATCGACGTCGCGACTGACCAGGATTTTTCTTGC
AGACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGA
AGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGT
ATCTTCGAGGGCCTGGTAAGTTACACGCCCCCTCATTATTGCTTTGCCAT
CTAACGATCGATTGTCGCAGGCATGGCTCTCCAACAACGTGAAGACGCAA
CCCCAGAAATAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:1968923..1969734+

>ASPNIDRAFT_47046-T1 ID=ASPNIDRAFT_47046-T1|Name=ASPNIDRAFT_47046-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2775bp|location=Sequence derived from alignment at ACJE01000010.1:1968923..1969734+ (Aspergillus niger ATCC 1015)
ATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTGGTACGAAGGA
GATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAGACCACAATCC
TCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCCCTACCGTC
GGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTCAATGTCTG
GGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACACTACTATT
CTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACACTGCTCGT
TTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATCGCGAAAT
GAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCAAGGCC
ACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGTTGAAG
GATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACTGGTAT
CTTCGAGGGCCTGGCATGGCTCTCCAACAACGTGAAGACGCAACCCCAGA
AATAAATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTGGTACG
AAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAGACCAC
AATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTATCCCTA
CCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGTTCAAT
GTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGACACTA
CTATTCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGACACTG
CTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACGATCGC
GAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGATGTTCA
AGGCCACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCACCAAGT
TGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGGGAACT
GGTATCTTCGAGGGCCTGGCATGGCTCTCCAACAACGTGAAGACGCAACC
CCAGAAATAAATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGATTTTTG
GTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTGGAAAG
ACCACAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACCACTAT
CCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGTGAAGT
TCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCTGGAGA
CACTACTATTCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCCAGCGA
CACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTATCAACG
ATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGCAGGAT
GTTCAAGGCCACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAGCTCAC
CAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAACGGAGG
GAACTGGTATCTTCGAGGGCCTGGCATGGCTCTCCAACAACGTGAAGACG
CAACCCCAGAAATAAATGGGTGGTCAGGTTTCCAAGATTATGGGGAAGAT
TTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGCTGCTG
GAAAGACCACAATCCTCTACAAATTGAAGCTCACCAATCAGGACGTCACC
ACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAGAATGT
GAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACCCCTCT
GGAGACACTACTATTCTGGTACACAAGGTTTGATCTTCGTTGTGGACTCC
AGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAGATTAT
CAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAATAAGC
AGGATGTTCAAGGCCACATGAGTCCCGAGGAAGTTACTCAAGCGCTACAG
CTCACCAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTCGCAAC
GGAGGGAACTGGTATCTTCGAGGGCCTGGCATGGCTCTCCAACAACGTGA
AGACGCAACCCCAGAAATAAATGGGTGGTCAGGTTTCCAAGATTATGGGG
AAGATTTTTGGTACGAAGGAGATGCGGATTTTGATGCTGGGTTTGGATGC
TGCTGGAAAGACCACAATCCTCTACAAATTGAAGCTCACCAATCAGGACG
TCACCACTATCCCTACCGTCGGTTTCAACGTTGAAAGCGTCACCTATAAG
AATGTGAAGTTCAATGTCTGGGATGTTGGTGGACAGGACAAGATCAGACC
CCTCTGGAGACACTACTATTCTGGTACACAAGGTTTGATCTTCGTTGTGG
ACTCCAGCGACACTGCTCGTTTGGAGGAGGCTCGCTCCGAGCTTCACAAG
ATTATCAACGATCGCGAAATGAAGGATGCTCTCTTGCTGGTCTTTGCCAA
TAAGCAGGATGTTCAAGGCCACATGAGTCCCGAGGAAGTTACTCAAGCGC
TACAGCTCACCAAGTTGAAGGATAAGCTGTGGTACGTTGCTCCAAGTGTC
GCAACGGAGGGAACTGGTATCTTCGAGGGCCTGGCATGGCTCTCCAACAA
CGTGAAGACGCAACCCCAGAAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ARF6ASPNIDRAFT_47046Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47046-T1ASPNIDRAFT_47046-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47046-T1.exon1ASPNIDRAFT_47046-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47046-T1.exon2ASPNIDRAFT_47046-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47046-T1.exon3ASPNIDRAFT_47046-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47046-T1.exon4ASPNIDRAFT_47046-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47046-T1.exon5ASPNIDRAFT_47046-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47046-T1.cdsASPNIDRAFT_47046-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR041838
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Product Arf Arf6
ProductADP-ribosylation factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1968923..1969734 +
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