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ASPNIDRAFT_47116-T1, ASPNIDRAFT_47116-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47116-T1
Unique NameASPNIDRAFT_47116-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2840004..2840852+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47116-T1 ID=ASPNIDRAFT_47116-T1|Name=ASPNIDRAFT_47116-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=849bp|location=Sequence derived from alignment at ACJE01000010.1:2840004..2840852+ (Aspergillus niger ATCC 1015)
ATGGCAACCACAACCACCACCTCAAACCCCACTCCAACAATGACCTACTA
CGACATCGCCATGCGACCTCCAGTAACCCGCAACGCCGCAGCCGTAAATC
CCTGGAAAGCGCGACTCGCACTGAATTTCAAAAACGCCCCCTACTCCACA
ACGTGGGTCAAGCTCCCTGAAGTATCCAAAGTGCGCCGCAGCCTGAACCT
CCCCGCATGTCGCAAATTCGCCGACGGCAGCGACTTCTACACCCTCCCTA
TCCTCTCCGATCCCACCACGAACTCCCTCATCGGCGACTCTTTCGATATC
GCTGTCTACCTACAAAAGACCTATCCCGCCTCCGGTGGCGGGGATCTCTT
CCCTCCGCAGAACCTGGATTATGAATTGAAAGAGGAGCTGAAGGTGCTGG
TGCCGCTATCGGAGCGGAATGATATCGAATATGCGGACTATGCCCGGTTT
AATAATAATGTCGATGCGGCGTTTAGTGTGCATACTATGTTGATGGTGCA
GAAGATGCCGTTTGATCCGGAGACGGCGGAGGAGAGTAAGGCGGAGTTTG
TCCGGCGGGCAGGGCTTAAGTCGTGGGATGATTTTACACTTGAGGGGGAG
AAGAGGGAGCAGGTGTTGGCTTCGTTCCGGGAGATGTTGAAGGATCTGGC
GAGGATGTTTGAGAGAGATCCCAGTGGGCCGTTTTTGTTGGGGGAGAGGC
CGAGTCATGCGGATTTTATTGTCGGAGGGTGGTTGAGGATGTCGAGGGTT
ACGCTGCCGTCGACGGAGTGGGAGCAGTTGAGAGAGTGGCATGGGGGTGT
TTTTGGAAGGTTGCATGATGCGTTGGATGTTTATGCTGAGGTTAAATAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:2840004..2840852+

>ASPNIDRAFT_47116-T1 ID=ASPNIDRAFT_47116-T1|Name=ASPNIDRAFT_47116-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1656bp|location=Sequence derived from alignment at ACJE01000010.1:2840004..2840852+ (Aspergillus niger ATCC 1015)
ATGGCAACCACAACCACCACCTCAAACCCCACTCCAACAATGACCTACTA
CGACATCGCCATGCGACCTCCAGTAACCCGCAACGCCGCAGCCGTAAATC
CCTGGAAAGCGCGACTCGCACTGAATTTCAAAAACGCCCCCTACTCCACA
ACGTGGGTCAAGCTCCCTGAAGTATCCAAAGTGCGCCGCAGCCTGAACCT
CCCCGCATGTCGCAAATTCGCCGACGGCAGCGACTTCTACACCCTCCCTA
TCCTCTCCGATCCCACCACGAACTCCCTCATCGGCGACTCTTTCGATATC
GCTGTCTACCTACAAAAGACCTATCCCGCCTCCGGTGGCGGGGATCTCTT
CCCTCCGCAGAACCTGGATTATGAATTGAAAGAGGAGCTGAAGCGGAATG
ATATCGAATATGCGGACTATGCCCGGTTTAATAATAATGTCGATGCGGCG
TTTAGTGTGCATACTATGTTGATGGTGCAGAAGATGCCGTTTGATCCGGA
GACGGCGGAGGAGAGTAAGGCGGAGTTTGTCCGGCGGGCAGGGCTTAAGT
CGTGGGATGATTTTACACTTGAGGGGGAGAAGAGGGAGCAGGTGTTGGCT
TCGTTCCGGGAGATGTTGAAGGATCTGGCGAGGATGTTTGAGAGAGATCC
CAGTGGGCCGTTTTTGTTGGGGGAGAGGCCGAGTCATGCGGATTTTATTG
TCGGAGGGTGGTTGAGGATGTCGAGGGTTACGCTGCCGTCGACGGAGTGG
GAGCAGTTGAGAGAGTGGCATGGGGGTGTTTTTGGAAGGTTGCATGATGC
GTTGGATGTTTATGCTGAGGTTAAATAGATGGCAACCACAACCACCACCT
CAAACCCCACTCCAACAATGACCTACTACGACATCGCCATGCGACCTCCA
GTAACCCGCAACGCCGCAGCCGTAAATCCCTGGAAAGCGCGACTCGCACT
GAATTTCAAAAACGCCCCCTACTCCACAACGTGGGTCAAGCTCCCTGAAG
TATCCAAAGTGCGCCGCAGCCTGAACCTCCCCGCATGTCGCAAATTCGCC
GACGGCAGCGACTTCTACACCCTCCCTATCCTCTCCGATCCCACCACGAA
CTCCCTCATCGGCGACTCTTTCGATATCGCTGTCTACCTACAAAAGACCT
ATCCCGCCTCCGGTGGCGGGGATCTCTTCCCTCCGCAGAACCTGGATTAT
GAATTGAAAGAGGAGCTGAAGCGGAATGATATCGAATATGCGGACTATGC
CCGGTTTAATAATAATGTCGATGCGGCGTTTAGTGTGCATACTATGTTGA
TGGTGCAGAAGATGCCGTTTGATCCGGAGACGGCGGAGGAGAGTAAGGCG
GAGTTTGTCCGGCGGGCAGGGCTTAAGTCGTGGGATGATTTTACACTTGA
GGGGGAGAAGAGGGAGCAGGTGTTGGCTTCGTTCCGGGAGATGTTGAAGG
ATCTGGCGAGGATGTTTGAGAGAGATCCCAGTGGGCCGTTTTTGTTGGGG
GAGAGGCCGAGTCATGCGGATTTTATTGTCGGAGGGTGGTTGAGGATGTC
GAGGGTTACGCTGCCGTCGACGGAGTGGGAGCAGTTGAGAGAGTGGCATG
GGGGTGTTTTTGGAAGGTTGCATGATGCGTTGGATGTTTATGCTGAGGTT
AAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47116ASPNIDRAFT_47116Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47116-T1.exon1ASPNIDRAFT_47116-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47116-T1.exon2ASPNIDRAFT_47116-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47116-T1.cdsASPNIDRAFT_47116-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47116-T1ASPNIDRAFT_47116-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_10000101.8
NoteEggNog:ENOG41
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF13410
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2840004..2840852 +
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