You are here

Home

ASPNIDRAFT_47218-T1, ASPNIDRAFT_47218-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47218-T1
Unique NameASPNIDRAFT_47218-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:3132574..3133275-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47218-T1 ID=ASPNIDRAFT_47218-T1|Name=ASPNIDRAFT_47218-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=702bp|location=Sequence derived from alignment at ACJE01000021.1:3132574..3133275- (Aspergillus niger ATCC 1015)
ATGCCATATCAGCTCGTCATTTTTGACTTTGACGGCACCCTGTTCGACAC
TTACGATGCCATCGAGTACTCCATCCAGTTGACCTTCCAGCGCCTCCTGC
CCTCCCATCCTCCGCCTTCGTCCAGCGATATTCGCCCGCTTGTCTCCACC
GGTGCGCCTCCCGGGGACACCTTTCGCAGTCTACACCCCGATCCCACCAC
CTTCGACGAATCCCTTTGGGTCCCCACCTACCGCGAGCTGTATGCCATCC
ATGGCCAATCCCGTACAACTCCCTATCCCGCCGCTCGCGACGTCCTACAA
GCCTTGCACGACCGGAATCAACCCATGGCCATCATTAGCAACAAAGCTGC
GGTGGCAGTGAAGGCGGCCTTAGAGAAGACCGACCTGCTGCAGTACTTTC
CAGACTCCCTCATTCTGGGTCATGGGGTGGCCGGCGTGCAGCGCAAGCCT
GATCCGTCCAGCTTCACGGACGTGCTCTGGCCGAACTGGAAGGCCCTCGG
GGCGCCCGATGGGGTGGATGCGGAGCGCGTGCTGATGGTCGGGGACACCT
TGACGGATATTCTGTACGCAAGGAACATTGGCGCCCAGGTCTGCTGGTGT
CGGTACGGCCAGGGTGATGTGGAGGAGTGCGAACGGCTGCAACCGGATCA
TACAGCGGAGACATTAGAGGATGTGCTCAAGATCGTGGAGAGCAGGTCAT
GA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:3132574..3133275-

>ASPNIDRAFT_47218-T1 ID=ASPNIDRAFT_47218-T1|Name=ASPNIDRAFT_47218-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=702bp|location=Sequence derived from alignment at ACJE01000021.1:3132574..3133275- (Aspergillus niger ATCC 1015)
ATGCCATATCAGCTCGTCATTTTTGACTTTGACGGCACCCTGTTCGACAC
TTACGATGCCATCGAGTACTCCATCCAGTTGACCTTCCAGCGCCTCCTGC
CCTCCCATCCTCCGCCTTCGTCCAGCGATATTCGCCCGCTTGTCTCCACC
GGTGCGCCTCCCGGGGACACCTTTCGCAGTCTACACCCCGATCCCACCAC
CTTCGACGAATCCCTTTGGGTCCCCACCTACCGCGAGCTGTATGCCATCC
ATGGCCAATCCCGTACAACTCCCTATCCCGCCGCTCGCGACGTCCTACAA
GCCTTGCACGACCGGAATCAACCCATGGCCATCATTAGCAACAAAGCTGC
GGTGGCAGTGAAGGCGGCCTTAGAGAAGACCGACCTGCTGCAGTACTTTC
CAGACTCCCTCATTCTGGGTCATGGGGTGGCCGGCGTGCAGCGCAAGCCT
GATCCGTCCAGCTTCACGGACGTGCTCTGGCCGAACTGGAAGGCCCTCGG
GGCGCCCGATGGGGTGGATGCGGAGCGCGTGCTGATGGTCGGGGACACCT
TGACGGATATTCTGTACGCAAGGAACATTGGCGCCCAGGTCTGCTGGTGT
CGGTACGGCCAGGGTGATGTGGAGGAGTGCGAACGGCTGCAACCGGATCA
TACAGCGGAGACATTAGAGGATGTGCTCAAGATCGTGGAGAGCAGGTCAT
GA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47218ASPNIDRAFT_47218Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47218-T1.cdsASPNIDRAFT_47218-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47218-T1.exon1ASPNIDRAFT_47218-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47218-T1ASPNIDRAFT_47218-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR041492
DBxrefInterPro:IPR023198
DBxrefInterPro:IPR023214
DBxrefPFAM:PF13242
DBxrefPFAM:PF00702
DBxrefPFAM:PF13419
DBxrefPFAM:PF12710
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:3132574..3133275 -
Powered by Drupal