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ASPNIDRAFT_47225-T1, ASPNIDRAFT_47225-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47225-T1
Unique NameASPNIDRAFT_47225-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:3088982..3090589-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47225-T1 ID=ASPNIDRAFT_47225-T1|Name=ASPNIDRAFT_47225-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1608bp|location=Sequence derived from alignment at ACJE01000021.1:3088982..3090589- (Aspergillus niger ATCC 1015)
ATGACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGC
TGTGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCG
ATAATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCT
GCCCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACC
GGCGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAA
CAGCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATG
ATCCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCA
TCCCTCGGGTGAGCTACAGACCACTTTAGCGACTGTCAAGTCACATACAC
TAACAATATTAATTTAGATAACCTTGGTGCCATTCTGGCCGTCGCAGATG
TCCGCAGCCGTGTAGCCCTGGCAGAGGGCGACCCCGACAGCATCGTGACA
ATGCAGCAGGTTCTGGAGGCCTTGATCAAGGCGTATGAGATTCAGGGCTG
CTTCCAGATCAAGAATGCCTTCAACAAAGTCGGGTTAGACCACACCATCC
TGGTCAAGATTGGCGCGACCGCCGTGTCGGCCTGGCTGCTAGATCTTCCT
CGCGAGCAAGCCCTTAGTGCTGTATCCCACGCCTGGATGGACGGTCACCC
ACTGCGCGTGTACCGCCAGGCACCCAACACCGGTCCGCGCAAGGGATGGG
CAGCGGGTGATGCTTGCATGCGGGCTGTGCATCTCGCACTACTAGCCAAG
GCCGGACAACCAGGTGCCAACACGGTGCTGACCACGCCCCGCTGGGGTTT
CTACGATGTACTATTCAAGGGCCAGGAATTCGATCTCCCCCAGCCATTTG
GCACCTGGGTCATTGAAACCGTGCTGTTTAAGGTGAACACGGCCGAGGGC
CATGGAATGACGGCAGTGGAAGCCGCGCTGGAGATCGCCAATACCCTGCG
GGCGCGTGGACTTGACCCAGCCAAGGATATCCAGTCAATCCACGCCAAGA
CCCAGGCTGCTGGTATGACGATCATCAACAAGGGCGGAGCAACTTTGCAT
AACGCCGCAGATCGTGACCACTGTCTGCGGTACATGGTCGCTGTAGTGCT
GCTGAAGGGAGCGCAGGTCGAGACGGCCGACTACCAGGACGACAGCCCCT
GGGCGACGGACCCGCGCGTCGATGCCCTGCGCCAGAAGATCACCATGGCA
GAGGACCCCAAATACACAGCCGATTATCATGATATGGCGGTGCGCAGTGT
GGCGAATTCGCTCACTGTCACCCTGACGGACGGCACGACGCTGCCTGAAG
TGTTGGTAGAATATCCACTGGGACATGTCCGACGCCCGGAGACGCCGCAG
GAAGTTTACGCAAAAGCAGAGCGGAATCTGGGTCTTCGATTGTCGACAGA
TAGAGTCCAGCAGATCCTGAAGACGGTGGCATCGGAGGAGTTTATGTCGC
TACCAGCATGCCATTTTGTGAACCTGTTCAGTTTGTAACCGAGGAATGGA
GGGAGATTATTCTATATTGGAGACTTCTGATGAATATGTGGTTTATGTTT
ATGTCTAA
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Coding sequence (CDS) from alignment at ACJE01000021.1:3088982..3090589-

>ASPNIDRAFT_47225-T1 ID=ASPNIDRAFT_47225-T1|Name=ASPNIDRAFT_47225-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4356bp|location=Sequence derived from alignment at ACJE01000021.1:3088982..3090589- (Aspergillus niger ATCC 1015)
ACTTCTGATGAATATGTGGTTTATGTTTATGTCTAAATAACCTTGGTGCC
ATTCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGCGA
CCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGATCAAGG
CGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAGTC
GGGTTAGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCGGC
CTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTATCCCACG
CCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACACC
GGTCCGCGCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTGCA
TCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCTGA
CCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAATTC
GATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTTAA
GGTGAACACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCTGG
AGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATATC
CAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAACAA
GGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGACCACTGTCTGCGGT
ACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCGAC
TACCAGGACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTGCG
CCAGAAGATCACCATGGCAGAGGACCCCAAATACACAGCCGATTATCATG
ATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGGAC
GGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTCCG
ACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGAATCTGG
GTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGATGACT
GTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGCTGTGAT
CCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCGATAATG
CCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCTGCCCTC
GAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACCGGCGTT
CCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAACAGCCT
ACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATGATCCGC
TACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCATCCCTC
GGACTTCTGATGAATATGTGGTTTATGTTTATGTCTAAATAACCTTGGTG
CCATTCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGGGC
GACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGATCAA
GGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAAAG
TCGGGTTAGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGTCG
GCCTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTATCCCA
CGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAACA
CCGGTCCGCGCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTGTG
CATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTGCT
GACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGAAT
TCGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGTTT
AAGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCGCT
GGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGATA
TCCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCAAC
AAGGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGACCACTGTCTGCG
GTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGCCG
ACTACCAGGACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCCTG
CGCCAGAAGATCACCATGGCAGAGGACCCCAAATACACAGCCGATTATCA
TGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGACGG
ACGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATGTC
CGACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGAATCT
GGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGATGA
CTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGCTGTG
ATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCGATAA
TGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCTGCCC
TCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACCGGCG
TTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAACAGC
CTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATGATCC
GCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCATCCC
TCGGACTTCTGATGAATATGTGGTTTATGTTTATGTCTAAATAACCTTGG
TGCCATTCTGGCCGTCGCAGATGTCCGCAGCCGTGTAGCCCTGGCAGAGG
GCGACCCCGACAGCATCGTGACAATGCAGCAGGTTCTGGAGGCCTTGATC
AAGGCGTATGAGATTCAGGGCTGCTTCCAGATCAAGAATGCCTTCAACAA
AGTCGGGTTAGACCACACCATCCTGGTCAAGATTGGCGCGACCGCCGTGT
CGGCCTGGCTGCTAGATCTTCCTCGCGAGCAAGCCCTTAGTGCTGTATCC
CACGCCTGGATGGACGGTCACCCACTGCGCGTGTACCGCCAGGCACCCAA
CACCGGTCCGCGCAAGGGATGGGCAGCGGGTGATGCTTGCATGCGGGCTG
TGCATCTCGCACTACTAGCCAAGGCCGGACAACCAGGTGCCAACACGGTG
CTGACCACGCCCCGCTGGGGTTTCTACGATGTACTATTCAAGGGCCAGGA
ATTCGATCTCCCCCAGCCATTTGGCACCTGGGTCATTGAAACCGTGCTGT
TTAAGGTGAACACGGCCGAGGGCCATGGAATGACGGCAGTGGAAGCCGCG
CTGGAGATCGCCAATACCCTGCGGGCGCGTGGACTTGACCCAGCCAAGGA
TATCCAGTCAATCCACGCCAAGACCCAGGCTGCTGGTATGACGATCATCA
ACAAGGGCGGAGCAACTTTGCATAACGCCGCAGATCGTGACCACTGTCTG
CGGTACATGGTCGCTGTAGTGCTGCTGAAGGGAGCGCAGGTCGAGACGGC
CGACTACCAGGACGACAGCCCCTGGGCGACGGACCCGCGCGTCGATGCCC
TGCGCCAGAAGATCACCATGGCAGAGGACCCCAAATACACAGCCGATTAT
CATGATATGGCGGTGCGCAGTGTGGCGAATTCGCTCACTGTCACCCTGAC
GGACGGCACGACGCTGCCTGAAGTGTTGGTAGAATATCCACTGGGACATG
TCCGACGCCCGGAGACGCCGCAGGAAGTTTACGCAAAAGCAGAGCGGAAT
CTGGGTCTTCGATTGTCGACAGATAGAGTCCAGCAGATCCTGAAGACGAT
GACTGTCATTCCTGCCGCCGACGACAACTCGCGCAAGCCCTACGATGCTG
TGATCCAGGCCATCGTCGACTATGTCTACGACTACCAGATCGCCACCGAT
AATGCCTGGGCGCGGGCCAAGGTCGCCTTGATGGATGCTCTTGGAGCTGC
CCTCGAGAGTATCCATACCAGTCCCCAATGCGCACAGCTCGTTGGACCGG
CGTTCCCCATCGCCCCAGCCACCTCGGGTTTGTTCCGGTTACCGGGAACA
GCCTACCAGCTGGATATCCTCAAGGGAGCCTTTGATCTGGGGGCCATGAT
CCGCTACCTCGACCACAATGATGCCTTTCCCGGTGCAGAATGGGGGCATC
CCTCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016829lyase activity
GO:00475472-methylcitrate dehydratase activity
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0019629propionate catabolic process, 2-methylcitrate cycle
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47225ASPNIDRAFT_47225Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47225-T1ASPNIDRAFT_47225-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47225-T1.cdsASPNIDRAFT_47225-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47225-T1.exon3ASPNIDRAFT_47225-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47225-T1.exon2ASPNIDRAFT_47225-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47225-T1.exon1ASPNIDRAFT_47225-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036148
DBxrefInterPro:IPR005656
DBxrefInterPro:IPR042188
DBxrefInterPro:IPR042183
DBxrefInterPro:IPR012705
DBxrefPFAM:PF03972
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:3088982..3090589 -
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