You are here

Home

ASPNIDRAFT_47372-T1, ASPNIDRAFT_47372-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47372-T1
Unique NameASPNIDRAFT_47372-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2097156..2098157+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47372-T1 ID=ASPNIDRAFT_47372-T1|Name=ASPNIDRAFT_47372-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1002bp|location=Sequence derived from alignment at ACJE01000021.1:2097156..2098157+ (Aspergillus niger ATCC 1015)
ATGAGCAGCCCGGGCGATTACAGCGCCGTCCGCAAGGACATTGTCGCACA
ACTGAAGAAGCCTGATTATGATGATGGAAGCGCAGGTCCAGTATTTGTCC
GGTTGGCATGGTGAGTTATTCCCCGGATGAAAAGTTTCCTGCATGTCAGT
CGCCACTAACCCCTGAGCAGGCACTCCGCGGGTACCTACGACGCCGAAAC
CGATACGGGCGGCAGCAACGGTGCGGGCATGCGATATGAAGCAGAGGGGG
GCGATCCATCAAACGCAGGCCTTCAGTACGGTCGAGCATTCTTAGAACCT
GTAAAGGAGAAGCACCCGTGGATTACATACTCCGATCTGTGGACGTTAGC
AGGCGTGGTGGCGATCAAGGAGATGGGCGGGCCGGAAGTTGAGTGGAAGC
CAGGTCGGACGGACCTGGTCGATGACTCCAAGGTACCGCCACGTGGTCGT
CTACCTGATGGTGCGCAGGGTGCAGACCACCTCCGCTTTATTTTCAACCG
GATGGGCTTCAACGACCAAGAGATCGTGGCGTTGGCGGGAGGACACAACC
TGGGCCGGTGCCATACCGATCGCAGTGGGTTCGAAGGTCCCTGGGTGAAC
AACCCAACACGGTTTTCTAATCAGTTCTTCAAGCTACTGTTGAAGTTAGA
GTGGACACCTCGGAAGTTAGCGAACGGCATGAGCCAGTTCGTGTATGAGG
ATCCGGATGCGGAGGAGGGAGACGAGTTGTTGATGATGCTGCCCACCGAT
ATAGCACTCAAGACGGACCCATCCTTCCGACAGTGGGTGGAGAAGTATGC
AGAGGACAAGGACCTGTTCTTTGACCACTTTGCGAAGGTATTCGCGAAAT
TGGTCGAGCTGGGTATCCGGCGAGACGAGAAGGGTGTTGTTCTCAACACC
GACAATGTCAAGGGAGGTTATATCTCTGCTCCCAAGAAGAGCAACACGCC
GACAGGACCACCGAGGAAGCCGAAGGCCGAAGCTGTGCGGGCCAGGCTGT
AA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2097156..2098157+

>ASPNIDRAFT_47372-T1 ID=ASPNIDRAFT_47372-T1|Name=ASPNIDRAFT_47372-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1884bp|location=Sequence derived from alignment at ACJE01000021.1:2097156..2098157+ (Aspergillus niger ATCC 1015)
ATGAGCAGCCCGGGCGATTACAGCGCCGTCCGCAAGGACATTGTCGCACA
ACTGAAGAAGCCTGATTATGATGATGGAAGCGCAGGTCCAGTATTTGTCC
GGTTGGCATGGCACTCCGCGGGTACCTACGACGCCGAAACCGATACGGGC
GGCAGCAACGGTGCGGGCATGCGATATGAAGCAGAGGGGGGCGATCCATC
AAACGCAGGCCTTCAGTACGGTCGAGCATTCTTAGAACCTGTAAAGGAGA
AGCACCCGTGGATTACATACTCCGATCTGTGGACGTTAGCAGGCGTGGTG
GCGATCAAGGAGATGGGCGGGCCGGAAGTTGAGTGGAAGCCAGGTCGGAC
GGACCTGGTCGATGACTCCAAGGTACCGCCACGTGGTCGTCTACCTGATG
GTGCGCAGGGTGCAGACCACCTCCGCTTTATTTTCAACCGGATGGGCTTC
AACGACCAAGAGATCGTGGCGTTGGCGGGAGGACACAACCTGGGCCGGTG
CCATACCGATCGCAGTGGGTTCGAAGGTCCCTGGGTGAACAACCCAACAC
GGTTTTCTAATCAGTTCTTCAAGCTACTGTTGAAGTTAGAGTGGACACCT
CGGAAGTTAGCGAACGGCATGAGCCAGTTCGTGTATGAGGATCCGGATGC
GGAGGAGGGAGACGAGTTGTTGATGATGCTGCCCACCGATATAGCACTCA
AGACGGACCCATCCTTCCGACAGTGGGTGGAGAAGTATGCAGAGGACAAG
GACCTGTTCTTTGACCACTTTGCGAAGGTATTCGCGAAATTGGTCGAGCT
GGGTATCCGGCGAGACGAGAAGGGTGTTGTTCTCAACACCGACAATGTCA
AGGGAGGTTATATCTCTGCTCCCAAGAAGAGCAACACGCCGACAGGACCA
CCGAGGAAGCCGAAGGCCGAAGCTGTGCGGGCCAGGCTGTAAATGAGCAG
CCCGGGCGATTACAGCGCCGTCCGCAAGGACATTGTCGCACAACTGAAGA
AGCCTGATTATGATGATGGAAGCGCAGGTCCAGTATTTGTCCGGTTGGCA
TGGCACTCCGCGGGTACCTACGACGCCGAAACCGATACGGGCGGCAGCAA
CGGTGCGGGCATGCGATATGAAGCAGAGGGGGGCGATCCATCAAACGCAG
GCCTTCAGTACGGTCGAGCATTCTTAGAACCTGTAAAGGAGAAGCACCCG
TGGATTACATACTCCGATCTGTGGACGTTAGCAGGCGTGGTGGCGATCAA
GGAGATGGGCGGGCCGGAAGTTGAGTGGAAGCCAGGTCGGACGGACCTGG
TCGATGACTCCAAGGTACCGCCACGTGGTCGTCTACCTGATGGTGCGCAG
GGTGCAGACCACCTCCGCTTTATTTTCAACCGGATGGGCTTCAACGACCA
AGAGATCGTGGCGTTGGCGGGAGGACACAACCTGGGCCGGTGCCATACCG
ATCGCAGTGGGTTCGAAGGTCCCTGGGTGAACAACCCAACACGGTTTTCT
AATCAGTTCTTCAAGCTACTGTTGAAGTTAGAGTGGACACCTCGGAAGTT
AGCGAACGGCATGAGCCAGTTCGTGTATGAGGATCCGGATGCGGAGGAGG
GAGACGAGTTGTTGATGATGCTGCCCACCGATATAGCACTCAAGACGGAC
CCATCCTTCCGACAGTGGGTGGAGAAGTATGCAGAGGACAAGGACCTGTT
CTTTGACCACTTTGCGAAGGTATTCGCGAAATTGGTCGAGCTGGGTATCC
GGCGAGACGAGAAGGGTGTTGTTCTCAACACCGACAATGTCAAGGGAGGT
TATATCTCTGCTCCCAAGAAGAGCAACACGCCGACAGGACCACCGAGGAA
GCCGAAGGCCGAAGCTGTGCGGGCCAGGCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0004601peroxidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006979response to oxidative stress
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47372ASPNIDRAFT_47372Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47372-T1.exon1ASPNIDRAFT_47372-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47372-T1.exon2ASPNIDRAFT_47372-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47372-T1.cdsASPNIDRAFT_47372-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47372-T1ASPNIDRAFT_47372-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteCAZy:AA2
DBxrefInterPro:IPR010255
DBxrefInterPro:IPR019794
DBxrefInterPro:IPR002207
DBxrefInterPro:IPR002016
DBxrefPFAM:PF00141
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2097156..2098157 +
Powered by Drupal