You are here

Home

ASPNIDRAFT_47796-T1, ASPNIDRAFT_47796-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47796-T1
Unique NameASPNIDRAFT_47796-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:216786..217754-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47796-T1 ID=ASPNIDRAFT_47796-T1|Name=ASPNIDRAFT_47796-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=969bp|location=Sequence derived from alignment at ACJE01000019.1:216786..217754- (Aspergillus niger ATCC 1015)
ATGGATGGCCTGCTCATCGACTCGGAGGACAAGTACACGGATATCACCAA
TGCCATTCTTCAGGAGTATGGAAAGCCTCTGCTCCCGTGGTCTATCAAAG
CTCAATTGCAGGGTCGTCCTCAACCAGACGTATGTAGATTCCCTTTCCCC
CCCCCCCCCCCCCCAAGTTCCCCGTTGCTGTTTATGCCCTTCACATATCG
CTCGAATCGCAAATACCTTAACCGCCATTTTCAAACCCTCTGTGTTCAAT
CCTCTGACTGTTCATTCTAGGCCAGTCGTATCTTCCACCATTGGGCCCAA
CTCCCCATCTCTCCTGAAGAATACGCCGCGAAGCAATCCGCCCTTCAGGA
GAAATTCTTCCCTCAATCCCAGCCCCTCCCGGGCGTCAGGGACCTCCTCG
CCAAGCTTGTTTCCACCCAAACTACCGATCAGCCCGTGCATCTAGCCCTT
GCCACATCTTCCCACAGCCGGAACTTCAAGCTGAAGGCCAGCCATCTGGG
CGACTTGTTCTCCGCATTCCCGAAATCCCAACAAGTGCTGGGCGACGATC
CCCGCATCGGCAAGGGACGGGGAAAGCCGCTTCCTGATATCTATCTGCTC
GCGCTTGAGACCATCAACACGAATCTGCGCGAGAAGGGAGAGACTGAGAT
CAAGCCCGAGGAGTGTCTGGTCTTTGAGGATGCGGTGCCCGGTGTTGAGG
CCGGTCGGAGAGCTGGTATGCGTGTTGTTTGGGTCCCGCATCCTGGTTTG
TTGGAGTCGTATAAGGGACGTGAGGATGAGGTGTTGGCTGGGCTTACGGG
GGAACATAAGGAAGCGGAGAAGACTGAGCCGGAGCGTGAAGCGGACGAAA
TCGTCGCCGGTCGGTTGAAGAGTGCCGGTAAGCCCGGTGAGATTGGTGAT
GGGTTGGGAGAGTTGTTGCCTTCTTTGGAGAATTTCCCGTATGAGCGTTA
TGGAATTAAACCTGCGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:216786..217754-

>ASPNIDRAFT_47796-T1 ID=ASPNIDRAFT_47796-T1|Name=ASPNIDRAFT_47796-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1656bp|location=Sequence derived from alignment at ACJE01000019.1:216786..217754- (Aspergillus niger ATCC 1015)
GCCAGTCGTATCTTCCACCATTGGGCCCAACTCCCCATCTCTCCTGAAGA
ATACGCCGCGAAGCAATCCGCCCTTCAGGAGAAATTCTTCCCTCAATCCC
AGCCCCTCCCGGGCGTCAGGGACCTCCTCGCCAAGCTTGTTTCCACCCAA
ACTACCGATCAGCCCGTGCATCTAGCCCTTGCCACATCTTCCCACAGCCG
GAACTTCAAGCTGAAGGCCAGCCATCTGGGCGACTTGTTCTCCGCATTCC
CGAAATCCCAACAAGTGCTGGGCGACGATCCCCGCATCGGCAAGGGACGG
GGAAAGCCGCTTCCTGATATCTATCTGCTCGCGCTTGAGACCATCAACAC
GAATCTGCGCGAGAAGGGAGAGACTGAGATCAAGCCCGAGGAGTGTCTGG
TCTTTGAGGATGCGGTGCCCGGTGTTGAGGCCGGTCGGAGAGCTGGTATG
CGTGTTGTTTGGGTCCCGCATCCTGGTTTGTTGGAGTCGTATAAGGGACG
TGAGGATGAGGTGTTGGCTGGGCTTACGGGGGAACATAAGGAAGCGGAGA
AGACTGAGCCGGAGCGTGAAGCGGACGAAATCGTCGCCGGTCGGTTGAAG
AGTGCCGGTAAGCCCGGTGAGATTGGTGATGGGTTGGGAGAGTTGTTGCC
TTCTTTGGAGAATTTCCCGTATGAGCGTTATGGAATTAAACCTGCGTGAA
TGGATGGCCTGCTCATCGACTCGGAGGACAAGTACACGGATATCACCAAT
GCCATTCTTCAGGAGTATGGAAAGCCTCTGCTCCCGTGGTCTATCAAAGC
TCAATTGCAGGGTCGTCCTCAACCAGACGCCAGTCGTATCTTCCACCATT
GGGCCCAACTCCCCATCTCTCCTGAAGAATACGCCGCGAAGCAATCCGCC
CTTCAGGAGAAATTCTTCCCTCAATCCCAGCCCCTCCCGGGCGTCAGGGA
CCTCCTCGCCAAGCTTGTTTCCACCCAAACTACCGATCAGCCCGTGCATC
TAGCCCTTGCCACATCTTCCCACAGCCGGAACTTCAAGCTGAAGGCCAGC
CATCTGGGCGACTTGTTCTCCGCATTCCCGAAATCCCAACAAGTGCTGGG
CGACGATCCCCGCATCGGCAAGGGACGGGGAAAGCCGCTTCCTGATATCT
ATCTGCTCGCGCTTGAGACCATCAACACGAATCTGCGCGAGAAGGGAGAG
ACTGAGATCAAGCCCGAGGAGTGTCTGGTCTTTGAGGATGCGGTGCCCGG
TGTTGAGGCCGGTCGGAGAGCTGGTATGCGTGTTGTTTGGGTCCCGCATC
CTGGTTTGTTGGAGTCGTATAAGGGACGTGAGGATGAGGTGTTGGCTGGG
CTTACGGGGGAACATAAGGAAGCGGAGAAGACTGAGCCGGAGCGTGAAGC
GGACGAAATCGTCGCCGGTCGGTTGAAGAGTGCCGGTAAGCCCGGTGAGA
TTGGTGATGGGTTGGGAGAGTTGTTGCCTTCTTTGGAGAATTTCCCGTAT
GAGCGTTATGGAATTAAACCTGCGTGAATGGATGGCCTGCTCATCGACTC
GGAGGACAAGTACACGGATATCACCAATGCCATTCTTCAGGAGTATGGAA
AGCCTCTGCTCCCGTGGTCTATCAAAGCTCAATTGCAGGGTCGTCCTCAA
CCAGAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47796ASPNIDRAFT_47796Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47796-T1ASPNIDRAFT_47796-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47796-T1.cdsASPNIDRAFT_47796-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47796-T1.exon2ASPNIDRAFT_47796-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_47796-T1.exon1ASPNIDRAFT_47796-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036412
DBxrefInterPro:IPR006439
DBxrefInterPro:IPR023198
DBxrefInterPro:IPR023214
DBxrefInterPro:IPR041492
DBxrefPFAM:PF00702
DBxrefPFAM:PF13419
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:216786..217754 -
Powered by Drupal