You are here

Home

ASPNIDRAFT_48037-T1, ASPNIDRAFT_48037-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_48037-T1
Unique NameASPNIDRAFT_48037-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1731332..1732059+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_48037-T1 ID=ASPNIDRAFT_48037-T1|Name=ASPNIDRAFT_48037-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=728bp|location=Sequence derived from alignment at ACJE01000019.1:1731332..1732059+ (Aspergillus niger ATCC 1015)
ATGGGTATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGA
TGTAAGTTCAATCCTATAGTCCTTTACCGAAAAACAAGCGCACGCAACCA
ACACTCCTCCCTCCCTTTGCGCCCGACTCCACCAACCCTCTTCGCATCCA
TCATCTAGATGCCAAAACTAACTTATCTCCATCACCACAGCCCAACCACC
CCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCTACGGT
TACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCAGATCCGAGCTA
CCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCAGCGGACATCAG
AGTGAGCCACCCTTCACCACCAGTATGACAGAGATAGAGTATAGTCCAAT
ACTGATAACGTGCAACAGTTCCGTTATCGACATCTGGTCGCTCCAACCCC
AACCGCATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCT
TCATCCTCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACGACCGACTC
GACACCGGCTCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCG
GCACGGTCCCGAAACATTGGGGCGAGGTGGTGATAAATACGCGCAAGAAT
CGGTCGCGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGA
TGTGTTTGGAGTGTTGAAGGTTACATGA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:1731332..1732059+

>ASPNIDRAFT_48037-T1 ID=ASPNIDRAFT_48037-T1|Name=ASPNIDRAFT_48037-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1566bp|location=Sequence derived from alignment at ACJE01000019.1:1731332..1732059+ (Aspergillus niger ATCC 1015)
ATGGGTATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGA
TCCCAACCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAAC
CGGGCTACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCA
GATCCGAGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCA
GCGGACATCAGATTCCGTTATCGACATCTGGTCGCTCCAACCCCAACCGC
ATCTCCAACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCC
TCCGATGGCGATGCGCCGCCCGTGAAAGTAATAACGACCGACTCGACACC
GGCTCGTTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGG
TCCCGAAACATTGGGGCGAGGTGGTGATAAATACGCGCAAGAATCGGTCG
CGGCCTGGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTT
TGGAGTGTTGAAGGTTACATGAATGGGTATCTGCGCCTCATGTCTCGGAC
GTAATCGTCAGGAACCCCACGATCCCAACCACCCCGAATCTTCCCGCCTC
CTCGATGAAGACATCTACCAACCGGGCTACGGTTACGGCGCCCTTCACCA
AAGCACCCAAGGCAACCACCCAGATCCGAGCTACCTGAAGCGCGAACGAG
AAGCCCTTGAAGCAATCTGCCAGCGGACATCAGATTCCGTTATCGACATC
TGGTCGCTCCAACCCCAACCGCATCTCCAACCTCGCGCCACCCTCCCCAG
CACTGTCCCCCCTCCTTCATCCTCCGATGGCGATGCGCCGCCCGTGAAAG
TAATAACGACCGACTCGACACCGGCTCGTTCAAAGAAACATTCCTCTCCG
GCTGCGAAGGCGGGCGGCACGGTCCCGAAACATTGGGGCGAGGTGGTGAT
AAATACGCGCAAGAATCGGTCGCGGCCTGGGTCGAGTACGGACGAAGACG
GTGCTGCTAAGAGAGATGTGTTTGGAGTGTTGAAGGTTACATGAATGGGT
ATCTGCGCCTCATGTCTCGGACGTAATCGTCAGGAACCCCACGATCCCAA
CCACCCCGAATCTTCCCGCCTCCTCGATGAAGACATCTACCAACCGGGCT
ACGGTTACGGCGCCCTTCACCAAAGCACCCAAGGCAACCACCCAGATCCG
AGCTACCTGAAGCGCGAACGAGAAGCCCTTGAAGCAATCTGCCAGCGGAC
ATCAGATTCCGTTATCGACATCTGGTCGCTCCAACCCCAACCGCATCTCC
AACCTCGCGCCACCCTCCCCAGCACTGTCCCCCCTCCTTCATCCTCCGAT
GGCGATGCGCCGCCCGTGAAAGTAATAACGACCGACTCGACACCGGCTCG
TTCAAAGAAACATTCCTCTCCGGCTGCGAAGGCGGGCGGCACGGTCCCGA
AACATTGGGGCGAGGTGGTGATAAATACGCGCAAGAATCGGTCGCGGCCT
GGGTCGAGTACGGACGAAGACGGTGCTGCTAAGAGAGATGTGTTTGGAGT
GTTGAAGGTTACATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0045121membrane raft
GO:0071986Ragulator complex
GO:0031902late endosome membrane
Vocabulary: Biological Process
TermDefinition
GO:0042632cholesterol homeostasis
GO:0007040lysosome organization
GO:0016197endosomal transport
GO:0071230cellular response to amino acid stimulus
GO:0032008positive regulation of TOR signaling
GO:0001919regulation of receptor recycling
GO:0043410positive regulation of MAPK cascade
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48037ASPNIDRAFT_48037Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48037-T1.exon1ASPNIDRAFT_48037-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48037-T1.exon2ASPNIDRAFT_48037-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48037-T1.exon3ASPNIDRAFT_48037-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48037-T1.cdsASPNIDRAFT_48037-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48037-T1ASPNIDRAFT_48037-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR028209
DBxrefPFAM:PF15454
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1731332..1732059 +
Powered by Drupal