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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:538145..539960+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_48684-T1 ID=ASPNIDRAFT_48684-T1|Name=ASPNIDRAFT_48684-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1816bp|location=Sequence derived from alignment at ACJE01000008.1:538145..539960+ (Aspergillus niger ATCC 1015)
ATGATGATAACTAAAAGTGCAGCGCGCGCTCTACTGCACACTACCGATTT
AGTCCGACGGCCGGCTCGGCCTCGCATCGGCGGTGAGGATGTGCACGACA
GAGGGTGGATTGGACGCTGACTGCTTATGGCTGATTGTGTTGACCGTCCG
CATGCAGCCGTGCCTTGCCTCGGCTCCTCAACACCGCGGCCAACCGAACG
GCCACTCGCTCTCCTTCCGGGTGAATTTCTCCTGACTCTGCTTTGTACTC
TGCTCCGTGTACATAATTCCTACTCTCTCTCGTCTTTGTTTGCACATTCA
GCCTTCCCGAACACTCATCATGTCTTTCTCCATGCCGATACGTCCAACAA
CCCGTCATGCCAGCCGGCTGGCTCAGGTACATACCCCTCCCCCTTGATGG
CTTGCCTATCATTGCTGACAACCCCAGGCCAAGATCCGCTCCGGCCGGCT
TTACAGCACCGAATCAGACCTCAAAACCGCCCTGAAATCCGTCATTCCCG
AGAAGCGGGAGCTCTTCAAGCAAGTCAAAGCTCGCAGCGACGATGTGGTC
GGCGAAGTCAAAGTGGGCAACATCATCGGCGGCATGCGCGGCCTGAAGTC
CATGCTCTGGGAGGGATCCGTACTGGACCCCGAAGAGGGTATCCGTTTCC
ACGGCAAGACCATCAAAGATTGCCAGCGTGAACTCCCCAAGGGCACCACG
GGAACTGAAATGCTCCCCGAGGCCATGTTCTGGCTGCTCTTGACGGGCCA
GGTTCCCACCACTAGCCAGGTGCGCGCATTCTCTCGCGAGCTCGCTGAGA
AGTCGCATCTCCCCGACCACATCCTCGGCCTGATCAAGTCATTCCCCAAG
GACATGCACCCCATGACGCAGCTGTCGGTGGCGGTTGCAGCGCTGAACAC
CGAGTCGACATTCGCCAAAGCGTACGAGCGCGGCCTGAACAAGGCAGACT
ACTGGGAGCCCACGTTCGATGATAGCATTTCGCTGCTGGCCAAGATCCCG
CGTGTGGCTGCATTGGTGTTCAGGTCGAACGAGATCGATCAGGTCGGGAC
GCAGGCGCTCGACGCGACACAGGACTGGTCGCACAACTTTGCCGAACTGC
TGGGCAAGGGCGGGGCCGAGCACGCGGACTTCCACGACCTGCTGCGACTG
TATCTGGCGCTGCATGGCGACCACGAGGGTGGCAACGTCTCAGCGCACGC
GACACATCTGGTGGGCAGTGCCCTCAGCGACCCGTTCCTCAGCTACAGCG
CAGGACTGCTGGGTCTGGCCGGCCCGCTGCACGGACTGGCGGCACAGGAA
GTGCTGCGGTGGATTCTGGCGATGCAGGAGAAGATTGGCACGCAGGTGAC
AGACGACTCGGTGCGCACGTACCTGTGGGACACATTGAAGTCGGGACGGG
TGGTGCCGGGCTACGGACACGGCGTGCTGCGCAAGCCGGACCCGCGATTC
GAGGCATTGATGGACTTCGCAGCTACACGGCCAGATGTGCAGGCGAACCC
TGTGTTCCAACTGGTGAAGAAGAACTCGGAGATTGCGCCAGAGGTGCTGA
CGCAGCATGGAAAGGTATGTTCCTGGTCACCACCTGTTTAGTATCAGACT
AACATATCATAGACGAAGAACCCCCACCCCAACGTGGACGCCGCCTCTGG
CGTGCTGTTCTATCACTATGGCTTCCAGCAGCCACTGTACTACACAGTAA
CCTTCGGCGTGAGTCGGGCGCTGGGACCTCTGGTGCAATTGATCTGGGAC
CGGGCCTTGGGATTGCCGATTGAGCGACCGAAGAGTATCAATCTGAAGGG
ATTGATCGGCAACTGA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:538145..539960+ >ASPNIDRAFT_48684-T1 ID=ASPNIDRAFT_48684-T1|Name=ASPNIDRAFT_48684-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4248bp|location=Sequence derived from alignment at ACJE01000008.1:538145..539960+ (Aspergillus niger ATCC 1015)
ATGATGATAACTAAAAGTGCAGCGCGCGCTCTACTGCACACTACCGATTT
AGTCCGACGGCCGGCTCGGCCTCGCATCGGCGGTGAGGATGTGCACGACA
GAGGCACCGAATCAGACCTCAAAACCGCCCTGAAATCCGTCATTCCCGAG
AAGCGGGAGCTCTTCAAGCAAGTCAAAGCTCGCAGCGACGATGTGGTCGG
CGAAGTCAAAGTGGGCAACATCATCGGCGGCATGCGCGGCCTGAAGTCCA
TGCTCTGGGAGGGATCCGTACTGGACCCCGAAGAGGGTATCCGTTTCCAC
GGCAAGACCATCAAAGATTGCCAGCGTGAACTCCCCAAGGGCACCACGGG
AACTGAAATGCTCCCCGAGGCCATGTTCTGGCTGCTCTTGACGGGCCAGG
TTCCCACCACTAGCCAGGTGCGCGCATTCTCTCGCGAGCTCGCTGAGAAG
TCGCATCTCCCCGACCACATCCTCGGCCTGATCAAGTCATTCCCCAAGGA
CATGCACCCCATGACGCAGCTGTCGGTGGCGGTTGCAGCGCTGAACACCG
AGTCGACATTCGCCAAAGCGTACGAGCGCGGCCTGAACAAGGCAGACTAC
TGGGAGCCCACGTTCGATGATAGCATTTCGCTGCTGGCCAAGATCCCGCG
TGTGGCTGCATTGGTGTTCAGGTCGAACGAGATCGATCAGGTCGGGACGC
AGGCGCTCGACGCGACACAGGACTGGTCGCACAACTTTGCCGAACTGCTG
GGCAAGGGCGGGGCCGAGCACGCGGACTTCCACGACCTGCTGCGACTGTA
TCTGGCGCTGCATGGCGACCACGAGGGTGGCAACGTCTCAGCGCACGCGA
CACATCTGGTGGGCAGTGCCCTCAGCGACCCGTTCCTCAGCTACAGCGCA
GGACTGCTGGGTCTGGCCGGCCCGCTGCACGGACTGGCGGCACAGGAAGT
GCTGCGGTGGATTCTGGCGATGCAGGAGAAGATTGGCACGCAGGTGACAG
ACGACTCGGTGCGCACGTACCTGTGGGACACATTGAAGTCGGGACGGGTG
GTGCCGGGCTACGGACACGGCGTGCTGCGCAAGCCGGACCCGCGATTCGA
GGCATTGATGGACTTCGCAGCTACACGGCCAGATGTGCAGGCGAACCCTG
TGTTCCAACTGGTGAAGAAGAACTCGGAGATTGCGCCAGAGGTGCTGACG
CAGCATGGAAAGACGAAGAACCCCCACCCCAACGTGGACGCCGCCTCTGG
CGTGCTGTTCTATCACTATGGCTTCCAGCAGCCACTGTACTACACAGTAA
CCTTCGGCGTGAGTCGGGCGCTGGGACCTCTGGTGCAATTGATCTGGGAC
CGGGCCTTGGGATTGCCGATTGAGCGACCGAAGAGTATCAATCTGAAGGG
ATTGATCGGCAACTGAATGATGATAACTAAAAGTGCAGCGCGCGCTCTAC
TGCACACTACCGATTTAGTCCGACGGCCGGCTCGGCCTCGCATCGGCGGT
GAGGATGTGCACGACAGAGGCACCGAATCAGACCTCAAAACCGCCCTGAA
ATCCGTCATTCCCGAGAAGCGGGAGCTCTTCAAGCAAGTCAAAGCTCGCA
GCGACGATGTGGTCGGCGAAGTCAAAGTGGGCAACATCATCGGCGGCATG
CGCGGCCTGAAGTCCATGCTCTGGGAGGGATCCGTACTGGACCCCGAAGA
GGGTATCCGTTTCCACGGCAAGACCATCAAAGATTGCCAGCGTGAACTCC
CCAAGGGCACCACGGGAACTGAAATGCTCCCCGAGGCCATGTTCTGGCTG
CTCTTGACGGGCCAGGTTCCCACCACTAGCCAGGTGCGCGCATTCTCTCG
CGAGCTCGCTGAGAAGTCGCATCTCCCCGACCACATCCTCGGCCTGATCA
AGTCATTCCCCAAGGACATGCACCCCATGACGCAGCTGTCGGTGGCGGTT
GCAGCGCTGAACACCGAGTCGACATTCGCCAAAGCGTACGAGCGCGGCCT
GAACAAGGCAGACTACTGGGAGCCCACGTTCGATGATAGCATTTCGCTGC
TGGCCAAGATCCCGCGTGTGGCTGCATTGGTGTTCAGGTCGAACGAGATC
GATCAGGTCGGGACGCAGGCGCTCGACGCGACACAGGACTGGTCGCACAA
CTTTGCCGAACTGCTGGGCAAGGGCGGGGCCGAGCACGCGGACTTCCACG
ACCTGCTGCGACTGTATCTGGCGCTGCATGGCGACCACGAGGGTGGCAAC
GTCTCAGCGCACGCGACACATCTGGTGGGCAGTGCCCTCAGCGACCCGTT
CCTCAGCTACAGCGCAGGACTGCTGGGTCTGGCCGGCCCGCTGCACGGAC
TGGCGGCACAGGAAGTGCTGCGGTGGATTCTGGCGATGCAGGAGAAGATT
GGCACGCAGGTGACAGACGACTCGGTGCGCACGTACCTGTGGGACACATT
GAAGTCGGGACGGGTGGTGCCGGGCTACGGACACGGCGTGCTGCGCAAGC
CGGACCCGCGATTCGAGGCATTGATGGACTTCGCAGCTACACGGCCAGAT
GTGCAGGCGAACCCTGTGTTCCAACTGGTGAAGAAGAACTCGGAGATTGC
GCCAGAGGTGCTGACGCAGCATGGAAAGACGAAGAACCCCCACCCCAACG
TGGACGCCGCCTCTGGCGTGCTGTTCTATCACTATGGCTTCCAGCAGCCA
CTGTACTACACAGTAACCTTCGGCGTGAGTCGGGCGCTGGGACCTCTGGT
GCAATTGATCTGGGACCGGGCCTTGGGATTGCCGATTGAGCGACCGAAGA
GTATCAATCTGAAGGGATTGATCGGCAACTGAATGATGATAACTAAAAGT
GCAGCGCGCGCTCTACTGCACACTACCGATTTAGTCCGACGGCCGGCTCG
GCCTCGCATCGGCGGTGAGGATGTGCACGACAGAGGCACCGAATCAGACC
TCAAAACCGCCCTGAAATCCGTCATTCCCGAGAAGCGGGAGCTCTTCAAG
CAAGTCAAAGCTCGCAGCGACGATGTGGTCGGCGAAGTCAAAGTGGGCAA
CATCATCGGCGGCATGCGCGGCCTGAAGTCCATGCTCTGGGAGGGATCCG
TACTGGACCCCGAAGAGGGTATCCGTTTCCACGGCAAGACCATCAAAGAT
TGCCAGCGTGAACTCCCCAAGGGCACCACGGGAACTGAAATGCTCCCCGA
GGCCATGTTCTGGCTGCTCTTGACGGGCCAGGTTCCCACCACTAGCCAGG
TGCGCGCATTCTCTCGCGAGCTCGCTGAGAAGTCGCATCTCCCCGACCAC
ATCCTCGGCCTGATCAAGTCATTCCCCAAGGACATGCACCCCATGACGCA
GCTGTCGGTGGCGGTTGCAGCGCTGAACACCGAGTCGACATTCGCCAAAG
CGTACGAGCGCGGCCTGAACAAGGCAGACTACTGGGAGCCCACGTTCGAT
GATAGCATTTCGCTGCTGGCCAAGATCCCGCGTGTGGCTGCATTGGTGTT
CAGGTCGAACGAGATCGATCAGGTCGGGACGCAGGCGCTCGACGCGACAC
AGGACTGGTCGCACAACTTTGCCGAACTGCTGGGCAAGGGCGGGGCCGAG
CACGCGGACTTCCACGACCTGCTGCGACTGTATCTGGCGCTGCATGGCGA
CCACGAGGGTGGCAACGTCTCAGCGCACGCGACACATCTGGTGGGCAGTG
CCCTCAGCGACCCGTTCCTCAGCTACAGCGCAGGACTGCTGGGTCTGGCC
GGCCCGCTGCACGGACTGGCGGCACAGGAAGTGCTGCGGTGGATTCTGGC
GATGCAGGAGAAGATTGGCACGCAGGTGACAGACGACTCGGTGCGCACGT
ACCTGTGGGACACATTGAAGTCGGGACGGGTGGTGCCGGGCTACGGACAC
GGCGTGCTGCGCAAGCCGGACCCGCGATTCGAGGCATTGATGGACTTCGC
AGCTACACGGCCAGATGTGCAGGCGAACCCTGTGTTCCAACTGGTGAAGA
AGAACTCGGAGATTGCGCCAGAGGTGCTGACGCAGCATGGAAAGACGAAG
AACCCCCACCCCAACGTGGACGCCGCCTCTGGCGTGCTGTTCTATCACTA
TGGCTTCCAGCAGCCACTGTACTACACAGTAACCTTCGGCGTGAGTCGGG
CGCTGGGACCTCTGGTGCAATTGATCTGGGACCGGGCCTTGGGATTGCCG
ATTGAGCGACCGAAGAGTATCAATCTGAAGGGATTGATCGGCAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006099 | tricarboxylic acid cycle |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036969 |
| DBxref | InterPro:IPR019810 |
| DBxref | InterPro:IPR016143 |
| DBxref | InterPro:IPR016142 |
| DBxref | InterPro:IPR002020 |
| DBxref | PFAM:PF00285 |
| Product | 2-methylcitrate synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:538145..539960 + |
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