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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:819370..821553+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_48734-T1 ID=ASPNIDRAFT_48734-T1|Name=ASPNIDRAFT_48734-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2184bp|location=Sequence derived from alignment at ACJE01000008.1:819370..821553+ (Aspergillus niger ATCC 1015)
ATGGGAGGAAACAAGCGCAAGCGCACAGAGGCTGGATGTTCAGATGACGA
AGATCCAGTAAGAAGCAGCTCAGATGCGAATAGCTTTGGCGTTGCTCAAA
CGCTTTCGCTCCTAAACTCGGGCAAGACAAAGTCTCCGAACGGTATCGAC
TCGGAAGAACCTGGGAAGGCGCAGGATGATATGCCGAAGGAAAGAGCTTC
GAAGAAGAAGCGCGTGGATGGGGAGAAGACAAAATACCCCGTCCTTACCT
ATGTTGAAGGGAAATTGCAATCATCCATCCGGATCTCCGATCTCCAGAGT
CTGCTACTCTACTGTTTTGCTGATGGCGTCGCGCCGCAGTGGATCTCAAT
CAAACACTCTGGTCATGTTAGGAAGATTGTCGTGCTGATGGTGCCTGGTC
TGGAACTGGGCATGTTTGATGGTTCACTTCCTTTGGATGCAGTTTCAGTT
ACTGAGAAGGAGACGGAAGAACCTGCCGGTGCGGACAAGGCAATGGAGGT
GGATACAAAAGCGGAAGAATTTGCTCGCTGGAAGCAAGGCCTGCCGCTGG
AGGACCGGTCACATCGGTTCAATCCTCGCCCTCTTTCGCGTGGTGACCTT
CCGGCTCCCCTACAACCGCTAGCGGACATGTTTCCTCACGCCTGGCCCGT
AAAAGCCCCCGGTGATTCCAAGTACAACAAGATCCACTCTCCACTTCAAG
CCATACTTCTATCTGCTCTACCGAAGGGCAAGGACAGTAACACGAAGGGA
GTAAAACCTCCCAAGGTGGACAAGAGTATCGCCTTCCAGCGTACACCAAT
CACCACTTTTATCAGTTCCCTGGAAGATCTCCGGGAGAATGACTATGTGC
TTCATCCGGCTCTGCTCGCCACAGAACAAGAGAAGTCGACTTTGTTGGAG
AACCGTAAGCGGGCCGGACATTCCAAGGAAGATGGATGGGTAGATACTCA
CGTCGAGAGCTTGGAGGCTGGTCAGGTACCAGACTCTGAAATCCAGCAAG
GCAGCATGACCGCAGGCCGGGATGTGCTAGCGTTGGATTGCGAGATGTGC
ATAACTGAAGGTGGCCAATCCGAGCTCACGCGCATTAGCATGGTCCGGTG
GGATGGTGAAGTCGTACTAGATGAGTTGGTGAAACCCCAGCGACCTATCA
TCGACTATTTGACTCGTTTCTCCGGTATCACGAAAGAATTACTCGATCCC
GTCACCACCACGCTTGCCGATGTCCAGCAGAAGCTTCTCTCCCTCCTTAC
TCCTCGTACTATTCTCGTCGGCCACTCTCTCAATTCCGATTTTAACGCCC
TGAAACTCACTCACCCGTTTATTGTCGACACCACATTTATTTACCCCCAT
CCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAGATGGCTCACCCAGAAGTA
TCTCGGAAAAGAGATCCAGAAGGGCCAGACCGGCCATGACTCGATCGAAG
ATGCGCGCGCAGTGCTCGAACTTGTGAAGCAGAAGTGCGAAAAGGGTGAG
CGCTGGGGCACCAGTGAGGCATCGAACGAGAGTATTTTCAAGCGCCTCGC
ACGCTCCATGCGTTCGGGGAAATCGGCCACCAACGAAGGCCGCACCGGCG
CTGTTGTCGACTGGGGCAACCCCGAGCGCGGCTTTGGGTCGCAGGCGACT
GCGTCGATCGGGTGCAGCAACGACACCGACGTAGTAAATGGCATCTCGAA
GGTAGTCAACGGCGACGACAGCAACCCCTCCATTCCCGGAGGTGGTGTTG
ACTTCACATGGGCTAGGTTGCGTGAGCTTGAAGTTTATCGCGGCTGGTGC
AATCGGATGCCCGACCCCAACAACGCCAACGAGTCGACGACGCTCGTTCC
CCCTCCTGAAGAAACGACTCCGACATCCGCCGCCGTCTCCCCCACCAAAG
AAGCCACTCGCAACCTCGCCGACACCGTCTCTCGTACCGTCTCCAACATC
CACCAAATCTACCAATCCCTCCCACCTTGCACGTTATTCCTTGTCTACTC
TGGTACCGGAGATCCCCGCGAAGTCAGCCGCCTCCAAGCCATGCACAAGA
CCTTCCGCGAAGAATTCAACTCCCGCAAACCGTGGGATGAGCTGACCGTC
AAATGGACCGATACTGAGGAGCAGGCGCTCAAGAAGGCCTGTGAGCGAGC
CAGAGAAGGCTGCGGGTTCATGTGTGTGAAGTAA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:819370..821553+ >ASPNIDRAFT_48734-T1 ID=ASPNIDRAFT_48734-T1|Name=ASPNIDRAFT_48734-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2184bp|location=Sequence derived from alignment at ACJE01000008.1:819370..821553+ (Aspergillus niger ATCC 1015)
ATGGGAGGAAACAAGCGCAAGCGCACAGAGGCTGGATGTTCAGATGACGA
AGATCCAGTAAGAAGCAGCTCAGATGCGAATAGCTTTGGCGTTGCTCAAA
CGCTTTCGCTCCTAAACTCGGGCAAGACAAAGTCTCCGAACGGTATCGAC
TCGGAAGAACCTGGGAAGGCGCAGGATGATATGCCGAAGGAAAGAGCTTC
GAAGAAGAAGCGCGTGGATGGGGAGAAGACAAAATACCCCGTCCTTACCT
ATGTTGAAGGGAAATTGCAATCATCCATCCGGATCTCCGATCTCCAGAGT
CTGCTACTCTACTGTTTTGCTGATGGCGTCGCGCCGCAGTGGATCTCAAT
CAAACACTCTGGTCATGTTAGGAAGATTGTCGTGCTGATGGTGCCTGGTC
TGGAACTGGGCATGTTTGATGGTTCACTTCCTTTGGATGCAGTTTCAGTT
ACTGAGAAGGAGACGGAAGAACCTGCCGGTGCGGACAAGGCAATGGAGGT
GGATACAAAAGCGGAAGAATTTGCTCGCTGGAAGCAAGGCCTGCCGCTGG
AGGACCGGTCACATCGGTTCAATCCTCGCCCTCTTTCGCGTGGTGACCTT
CCGGCTCCCCTACAACCGCTAGCGGACATGTTTCCTCACGCCTGGCCCGT
AAAAGCCCCCGGTGATTCCAAGTACAACAAGATCCACTCTCCACTTCAAG
CCATACTTCTATCTGCTCTACCGAAGGGCAAGGACAGTAACACGAAGGGA
GTAAAACCTCCCAAGGTGGACAAGAGTATCGCCTTCCAGCGTACACCAAT
CACCACTTTTATCAGTTCCCTGGAAGATCTCCGGGAGAATGACTATGTGC
TTCATCCGGCTCTGCTCGCCACAGAACAAGAGAAGTCGACTTTGTTGGAG
AACCGTAAGCGGGCCGGACATTCCAAGGAAGATGGATGGGTAGATACTCA
CGTCGAGAGCTTGGAGGCTGGTCAGGTACCAGACTCTGAAATCCAGCAAG
GCAGCATGACCGCAGGCCGGGATGTGCTAGCGTTGGATTGCGAGATGTGC
ATAACTGAAGGTGGCCAATCCGAGCTCACGCGCATTAGCATGGTCCGGTG
GGATGGTGAAGTCGTACTAGATGAGTTGGTGAAACCCCAGCGACCTATCA
TCGACTATTTGACTCGTTTCTCCGGTATCACGAAAGAATTACTCGATCCC
GTCACCACCACGCTTGCCGATGTCCAGCAGAAGCTTCTCTCCCTCCTTAC
TCCTCGTACTATTCTCGTCGGCCACTCTCTCAATTCCGATTTTAACGCCC
TGAAACTCACTCACCCGTTTATTGTCGACACCACATTTATTTACCCCCAT
CCCCGCGGGCCGCCGCTCAAGTGCAGTTTGAGATGGCTCACCCAGAAGTA
TCTCGGAAAAGAGATCCAGAAGGGCCAGACCGGCCATGACTCGATCGAAG
ATGCGCGCGCAGTGCTCGAACTTGTGAAGCAGAAGTGCGAAAAGGGTGAG
CGCTGGGGCACCAGTGAGGCATCGAACGAGAGTATTTTCAAGCGCCTCGC
ACGCTCCATGCGTTCGGGGAAATCGGCCACCAACGAAGGCCGCACCGGCG
CTGTTGTCGACTGGGGCAACCCCGAGCGCGGCTTTGGGTCGCAGGCGACT
GCGTCGATCGGGTGCAGCAACGACACCGACGTAGTAAATGGCATCTCGAA
GGTAGTCAACGGCGACGACAGCAACCCCTCCATTCCCGGAGGTGGTGTTG
ACTTCACATGGGCTAGGTTGCGTGAGCTTGAAGTTTATCGCGGCTGGTGC
AATCGGATGCCCGACCCCAACAACGCCAACGAGTCGACGACGCTCGTTCC
CCCTCCTGAAGAAACGACTCCGACATCCGCCGCCGTCTCCCCCACCAAAG
AAGCCACTCGCAACCTCGCCGACACCGTCTCTCGTACCGTCTCCAACATC
CACCAAATCTACCAATCCCTCCCACCTTGCACGTTATTCCTTGTCTACTC
TGGTACCGGAGATCCCCGCGAAGTCAGCCGCCTCCAAGCCATGCACAAGA
CCTTCCGCGAAGAATTCAACTCCCGCAAACCGTGGGATGAGCTGACCGTC
AAATGGACCGATACTGAGGAGCAGGCGCTCAAGAAGGCCTGTGAGCGAGC
CAGAGAAGGCTGCGGGTTCATGTGTGTGAAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR034922 |
| DBxref | InterPro:IPR036397 |
| DBxref | InterPro:IPR013520 |
| DBxref | PFAM:PF00929 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:819370..821553 + |
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