|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:874243..875903+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_49072-T1 ID=ASPNIDRAFT_49072-T1|Name=ASPNIDRAFT_49072-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1661bp|location=Sequence derived from alignment at ACJE01000013.1:874243..875903+ (Aspergillus niger ATCC 1015)
ATGCCTCACTCAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGA
TGAACTTCTACCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGG
AGGCCAATGCAGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGAC
GACGATGATGAATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGC
TTCCTCTGCTCCGGAGTAAGTATACATGATGTGATATAATTCGAGGGAGG
GGGCATTAACCTGAAATTTACCAGACCTGCTGCTGCTCCGGGACCCCAGG
TTGATACCGATACAATGCTTGCGTTCTATCAACGCCTCTTTCCCTTCCGC
TATCTATTCCAATGGTTGAACCATGGCATTGTTCCTTCCCCCGACTTCGG
AAACCGTGAATTCGCCCTTACCCTTCAAAACGATGCCTACCTGCGATATC
AGTCATATGCGACCGCGGATCTGTGAGTCGAAGAGTCCTTCATCGCTGTT
TCAAGGCTCTAACGTTCCCCATCTTATAGTTTCCGGAAAGATATCCTAAA
AATGAACCCATCTCGGTTTGAAATCGGGCCTGTCTACAACACGAATCCGC
GAGACAGGAAGACGCTCCGAGGTGGCCAGATGAAGCCGATTGCCAAAGAA
TTAGTATTCGATATCGACCTTACGGATTACGATGACATCAGATCCTGTTG
TGAGAAGGCAAACATTTGTAGCAAGTGCTGGGCTTTTGTCACCATGGCAA
TGAAAGTCGTCGACACGGCGCTACGCGAAGATTTCGGTTTCGAGCATATA
TTATGGGTCTATTCTGGTCGTCGTGGTGCCCACGCCTGGGTTTGCGATCC
CCGTGCACGCAACCTTCCAGATGATCGGAGAAGAGCCATCGCGGGCTACT
TAGATGTCATCCGAGGAGGAAATTCGAGCGGAAAGCGTGTTAATCTCAAG
CGGCCTCTGCATCCACACATGTCTCGCAGCCTCGAAATTCTTAAACCGTA
CTTCGCTCAAACTACGTTGGTGGACCAGGAAACATTTGGGAGTTCAGAGC
AAGCGCAACGTCTTCTTTCTTTGCTGCCCGACAAGGGGTTGAACGAATCC
TTAAGGAAGAGATGGGAGTCTTCGCCCGACCGCAGCAGTGCCAATAAGTG
GGCGGATATCGACGCCTTGGCCAAGACAGGCAAGAGCAGCACTCTCAACC
CTACTACACTGCGAGATGCCAAGCAAGACATTGTTCTCGAGTACACATAT
CCGCGCCTGGATTCTGAAGTTAGCAAAAAGATGATTCACTTGCTAAAGAG
TCCATTTGTCATTCACCCTGGCACTGGTCGCGTGTGTGTTCCGATAGACG
CCCGAAAGGCGGAACAATTCGACCCCCTCTCGGTACCTACAGTTTCGGAA
CTGCTTGCGGAGATCGATGCGTGGGATGCGGAGCATCCAAGCACCAATGC
AGGTCCGGAGGTAGCAGATGGCGAAGGTAGTGTACCCGACTCCGATGCTA
GGGGTAGTCGCAGACTGCAAGACTATGAAAAGACGAGTCTGAAGCCGTAC
GTCGACTATTTCCGCTCATTCATTGCCGGGCTTCTGAAGGAAGAGCGTAC
GGGCAAGCGGGAAAGGAACGACGATGCGACTGAGGTCAAGACCGAGAGCA
TGGAGTTCTAG back to topCoding sequence (CDS) from alignment at ACJE01000013.1:874243..875903+ >ASPNIDRAFT_49072-T1 ID=ASPNIDRAFT_49072-T1|Name=ASPNIDRAFT_49072-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4635bp|location=Sequence derived from alignment at ACJE01000013.1:874243..875903+ (Aspergillus niger ATCC 1015)
ATGCCTCACTCAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGA
TGAACTTCTACCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGG
AGGCCAATGCAGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGAC
GACGATGATGAATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGC
TTCCTCTGCTCCGGAACCTGCTGCTGCTCCGGGACCCCAGGTTGATACCG
ATACAATGCTTGCGTTCTATCAACGCCTCTTTCCCTTCCGCTATCTATTC
CAATGGTTGAACCATGGCATTGTTCCTTCCCCCGACTTCGGAAACCGTGA
ATTCGCCCTTACCCTTCAAAACGATGCCTACCTGCGATATCAGTCATATG
CGACCGCGGATCTTTTCCGGAAAGATATCCTAAAAATGAACCCATCTCGG
TTTGAAATCGGGCCTGTCTACAACACGAATCCGCGAGACAGGAAGACGCT
CCGAGGTGGCCAGATGAAGCCGATTGCCAAAGAATTAGTATTCGATATCG
ACCTTACGGATTACGATGACATCAGATCCTGTTGTGAGAAGGCAAACATT
TGTAGCAAGTGCTGGGCTTTTGTCACCATGGCAATGAAAGTCGTCGACAC
GGCGCTACGCGAAGATTTCGGTTTCGAGCATATATTATGGGTCTATTCTG
GTCGTCGTGGTGCCCACGCCTGGGTTTGCGATCCCCGTGCACGCAACCTT
CCAGATGATCGGAGAAGAGCCATCGCGGGCTACTTAGATGTCATCCGAGG
AGGAAATTCGAGCGGAAAGCGTGTTAATCTCAAGCGGCCTCTGCATCCAC
ACATGTCTCGCAGCCTCGAAATTCTTAAACCGTACTTCGCTCAAACTACG
TTGGTGGACCAGGAAACATTTGGGAGTTCAGAGCAAGCGCAACGTCTTCT
TTCTTTGCTGCCCGACAAGGGGTTGAACGAATCCTTAAGGAAGAGATGGG
AGTCTTCGCCCGACCGCAGCAGTGCCAATAAGTGGGCGGATATCGACGCC
TTGGCCAAGACAGGCAAGAGCAGCACTCTCAACCCTACTACACTGCGAGA
TGCCAAGCAAGACATTGTTCTCGAGTACACATATCCGCGCCTGGATTCTG
AAGTTAGCAAAAAGATGATTCACTTGCTAAAGAGTCCATTTGTCATTCAC
CCTGGCACTGGTCGCGTGTGTGTTCCGATAGACGCCCGAAAGGCGGAACA
ATTCGACCCCCTCTCGGTACCTACAGTTTCGGAACTGCTTGCGGAGATCG
ATGCGTGGGATGCGGAGCATCCAAGCACCAATGCAGGTCCGGAGGTAGCA
GATGGCGAAGGTAGTGTACCCGACTCCGATGCTAGGGGTAGTCGCAGACT
GCAAGACTATGAAAAGACGAGTCTGAAGCCGTACGTCGACTATTTCCGCT
CATTCATTGCCGGGCTTCTGAAGGAAGAGCGTACGGGCAAGCGGGAAAGG
AACGACGATGCGACTGAGGTCAAGACCGAGAGCATGGAGTTCTAGATGCC
TCACTCAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGATGAAC
TTCTACCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGGAGGCC
AATGCAGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGACGACGA
TGATGAATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGCTTCCT
CTGCTCCGGAACCTGCTGCTGCTCCGGGACCCCAGGTTGATACCGATACA
ATGCTTGCGTTCTATCAACGCCTCTTTCCCTTCCGCTATCTATTCCAATG
GTTGAACCATGGCATTGTTCCTTCCCCCGACTTCGGAAACCGTGAATTCG
CCCTTACCCTTCAAAACGATGCCTACCTGCGATATCAGTCATATGCGACC
GCGGATCTTTTCCGGAAAGATATCCTAAAAATGAACCCATCTCGGTTTGA
AATCGGGCCTGTCTACAACACGAATCCGCGAGACAGGAAGACGCTCCGAG
GTGGCCAGATGAAGCCGATTGCCAAAGAATTAGTATTCGATATCGACCTT
ACGGATTACGATGACATCAGATCCTGTTGTGAGAAGGCAAACATTTGTAG
CAAGTGCTGGGCTTTTGTCACCATGGCAATGAAAGTCGTCGACACGGCGC
TACGCGAAGATTTCGGTTTCGAGCATATATTATGGGTCTATTCTGGTCGT
CGTGGTGCCCACGCCTGGGTTTGCGATCCCCGTGCACGCAACCTTCCAGA
TGATCGGAGAAGAGCCATCGCGGGCTACTTAGATGTCATCCGAGGAGGAA
ATTCGAGCGGAAAGCGTGTTAATCTCAAGCGGCCTCTGCATCCACACATG
TCTCGCAGCCTCGAAATTCTTAAACCGTACTTCGCTCAAACTACGTTGGT
GGACCAGGAAACATTTGGGAGTTCAGAGCAAGCGCAACGTCTTCTTTCTT
TGCTGCCCGACAAGGGGTTGAACGAATCCTTAAGGAAGAGATGGGAGTCT
TCGCCCGACCGCAGCAGTGCCAATAAGTGGGCGGATATCGACGCCTTGGC
CAAGACAGGCAAGAGCAGCACTCTCAACCCTACTACACTGCGAGATGCCA
AGCAAGACATTGTTCTCGAGTACACATATCCGCGCCTGGATTCTGAAGTT
AGCAAAAAGATGATTCACTTGCTAAAGAGTCCATTTGTCATTCACCCTGG
CACTGGTCGCGTGTGTGTTCCGATAGACGCCCGAAAGGCGGAACAATTCG
ACCCCCTCTCGGTACCTACAGTTTCGGAACTGCTTGCGGAGATCGATGCG
TGGGATGCGGAGCATCCAAGCACCAATGCAGGTCCGGAGGTAGCAGATGG
CGAAGGTAGTGTACCCGACTCCGATGCTAGGGGTAGTCGCAGACTGCAAG
ACTATGAAAAGACGAGTCTGAAGCCGTACGTCGACTATTTCCGCTCATTC
ATTGCCGGGCTTCTGAAGGAAGAGCGTACGGGCAAGCGGGAAAGGAACGA
CGATGCGACTGAGGTCAAGACCGAGAGCATGGAGTTCTAGATGCCTCACT
CAGTATCTTCGCAGGACTCGTCCGCTGGTCGCAAGGATGATGAACTTCTA
CCTGACGCTCCTCCTGCAGAGACAGCACCCGCAAACCAGGAGGCCAATGC
AGCCTCAGGAGTGAAACTTGAAGACCTATTCAACGATGACGACGATGATG
AATACCCAGCCTCTAGTGCGCCAGAGACGAAAAATGGTGCTTCCTCTGCT
CCGGAACCTGCTGCTGCTCCGGGACCCCAGGTTGATACCGATACAATGCT
TGCGTTCTATCAACGCCTCTTTCCCTTCCGCTATCTATTCCAATGGTTGA
ACCATGGCATTGTTCCTTCCCCCGACTTCGGAAACCGTGAATTCGCCCTT
ACCCTTCAAAACGATGCCTACCTGCGATATCAGTCATATGCGACCGCGGA
TCTTTTCCGGAAAGATATCCTAAAAATGAACCCATCTCGGTTTGAAATCG
GGCCTGTCTACAACACGAATCCGCGAGACAGGAAGACGCTCCGAGGTGGC
CAGATGAAGCCGATTGCCAAAGAATTAGTATTCGATATCGACCTTACGGA
TTACGATGACATCAGATCCTGTTGTGAGAAGGCAAACATTTGTAGCAAGT
GCTGGGCTTTTGTCACCATGGCAATGAAAGTCGTCGACACGGCGCTACGC
GAAGATTTCGGTTTCGAGCATATATTATGGGTCTATTCTGGTCGTCGTGG
TGCCCACGCCTGGGTTTGCGATCCCCGTGCACGCAACCTTCCAGATGATC
GGAGAAGAGCCATCGCGGGCTACTTAGATGTCATCCGAGGAGGAAATTCG
AGCGGAAAGCGTGTTAATCTCAAGCGGCCTCTGCATCCACACATGTCTCG
CAGCCTCGAAATTCTTAAACCGTACTTCGCTCAAACTACGTTGGTGGACC
AGGAAACATTTGGGAGTTCAGAGCAAGCGCAACGTCTTCTTTCTTTGCTG
CCCGACAAGGGGTTGAACGAATCCTTAAGGAAGAGATGGGAGTCTTCGCC
CGACCGCAGCAGTGCCAATAAGTGGGCGGATATCGACGCCTTGGCCAAGA
CAGGCAAGAGCAGCACTCTCAACCCTACTACACTGCGAGATGCCAAGCAA
GACATTGTTCTCGAGTACACATATCCGCGCCTGGATTCTGAAGTTAGCAA
AAAGATGATTCACTTGCTAAAGAGTCCATTTGTCATTCACCCTGGCACTG
GTCGCGTGTGTGTTCCGATAGACGCCCGAAAGGCGGAACAATTCGACCCC
CTCTCGGTACCTACAGTTTCGGAACTGCTTGCGGAGATCGATGCGTGGGA
TGCGGAGCATCCAAGCACCAATGCAGGTCCGGAGGTAGCAGATGGCGAAG
GTAGTGTACCCGACTCCGATGCTAGGGGTAGTCGCAGACTGCAAGACTAT
GAAAAGACGAGTCTGAAGCCGTACGTCGACTATTTCCGCTCATTCATTGC
CGGGCTTCTGAAGGAAGAGCGTACGGGCAAGCGGGAAAGGAACGACGATG
CGACTGAGGTCAAGACCGAGAGCATGGAGTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003896 | DNA primase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006269 | DNA replication, synthesis of RNA primer |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261ZI1 |
| DBxref | InterPro:IPR002755 |
| DBxref | InterPro:IPR014052 |
| DBxref | PFAM:PF01896 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:874243..875903 + |
|
