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ASPNIDRAFT_49344-T1, ASPNIDRAFT_49344-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_49344-T1
Unique NameASPNIDRAFT_49344-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:897607..898972+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_49344-T1 ID=ASPNIDRAFT_49344-T1|Name=ASPNIDRAFT_49344-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1366bp|location=Sequence derived from alignment at ACJE01000002.1:897607..898972+ (Aspergillus niger ATCC 1015)
ATGACCTGGTATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCC
TAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACT
GGTATTACACTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATG
CAATGGCAGGCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTA
CCTGGTAAGTGACCTGACCACACCCATCCCCCCTGAACTTGGACAATAGT
CTGACTCTCGTCGCTGTTCACTAGGGTAACGACGATCAAATGTTCTGGGG
TCTTGCCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCG
GATATTCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGAC
CGATGGGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCC
TTACGAGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGT
TCCAACTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCC
GACTGGGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAA
CAACGAGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCT
CCACCCAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACG
GGAGCCGCGTACATGTACAACTATGTGAGTGATTCCGACCCCCTTGAGGT
ACGAAGGAAACATGTGCTGATTTGACGCCATTCACAGACCGGCAAGGCCA
AGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGACACCTTT
TTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTGTGAGCC
GACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCGTCACCG
GATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGATAGCATT
TTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGG
AATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATG
GATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTATCCTCC
GCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCACCGGAGG
CAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCGGGAGCA
GCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGTGCCTCC
ATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGCTTGGAT
GGTCATTGGCGGTTGA
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Coding sequence (CDS) from alignment at ACJE01000002.1:897607..898972+

>ASPNIDRAFT_49344-T1 ID=ASPNIDRAFT_49344-T1|Name=ASPNIDRAFT_49344-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3699bp|location=Sequence derived from alignment at ACJE01000002.1:897607..898972+ (Aspergillus niger ATCC 1015)
ATGACCTGGTATCATGGAAACGAAACCGGTCAGATTCCCGGTGCTTTCCC
TAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACAAGTTTGCTCCTCTACT
GGTATTACACTGGAGACAGTACCTACAACGACGAGGTCCGTCAGGGTATG
CAATGGCAGGCGGGTGACTGCGATTACATGCCCGCCAATTACAGTAGTTA
CCTGGGTAACGACGATCAAATGTTCTGGGGTCTTGCCGCCATCACCGCTG
CCGAGATCGAATTCGCCGACAGCTCCTCCGGATATTCCTGGCTCGCTTTG
GCCCAGGGTGTTTACAACACTCAGATCGACCGATGGGATGATTCGACATG
TGGCGGCGGTTTGCGCTGGCAGATCTACCCTTACGAGGCCGGTTACGCCA
TGAAGAACTCCATCTCGAACGGAGGTTTGTTCCAACTCGCCGCCCGCCTG
GCCCGCTACACCTCAAACGACACATACGCCGACTGGGCAGAGAAGATCTT
CGATTGGTGTGCCTCGACTCCGTTGCTAAACAACGAGACTTGGAACGTGG
CCGACTCCACCGATGTCGATAACAGCTGCTCCACCCAAGGCAACAACCAG
TGGTCTTACAACTACGGCGTGTTCTTGACGGGAGCCGCGTACATGTACAA
CTATACCGGCAAGGCCAAGTGGAAGACTGCGGCGGAGGGCCTCTTGAACG
TCACGCTCGACACCTTTTTCCCGGCGAAGTATGGTGGAAACATCATGTCC
GAAATTCTCTGTGAGCCGACCGAAGTGTGCAATGACAACGAAATTCTGTT
CAAGGGTCTCGTCACCGGATGGCTTGGACTTGTGGCCCTAGTGATGCCGT
CGACGTATGATAGCATTTTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCC
GCAGCCTCCTGCAGCGGAATGAGCAACAACACTTGTGGTGTGCGCTGGTG
GCCCAAGAAGTGGGATGGATGGAACGGAATGGAGGAGGAAATCGCCGTCA
CCAACGTTCTATCCTCCGCGTTGGTCAACACGAAGAAAACCGCCCCTGTG
ACCTCCAGCACCGGAGGCAATAGTAGTAGTGATCCGAACGCAGGTACGGG
CGACAACACCGGGAGCAGCGGCAGTACCGAATCGAAGATCACCACGGGCG
ACAAGGCGGGTGCCTCCATCCTGACCATTGCCTTTGTGGGCATGTGGGGA
GGTATGATCGCTTGGATGGTCATTGGCGGTTGAATGACCTGGTATCATGG
AAACGAAACCGGTCAGATTCCCGGTGCTTTCCCTAGCAAGTGGTGGGAGG
GTAGCGCGCTTTTCACAAGTTTGCTCCTCTACTGGTATTACACTGGAGAC
AGTACCTACAACGACGAGGTCCGTCAGGGTATGCAATGGCAGGCGGGTGA
CTGCGATTACATGCCCGCCAATTACAGTAGTTACCTGGGTAACGACGATC
AAATGTTCTGGGGTCTTGCCGCCATCACCGCTGCCGAGATCGAATTCGCC
GACAGCTCCTCCGGATATTCCTGGCTCGCTTTGGCCCAGGGTGTTTACAA
CACTCAGATCGACCGATGGGATGATTCGACATGTGGCGGCGGTTTGCGCT
GGCAGATCTACCCTTACGAGGCCGGTTACGCCATGAAGAACTCCATCTCG
AACGGAGGTTTGTTCCAACTCGCCGCCCGCCTGGCCCGCTACACCTCAAA
CGACACATACGCCGACTGGGCAGAGAAGATCTTCGATTGGTGTGCCTCGA
CTCCGTTGCTAAACAACGAGACTTGGAACGTGGCCGACTCCACCGATGTC
GATAACAGCTGCTCCACCCAAGGCAACAACCAGTGGTCTTACAACTACGG
CGTGTTCTTGACGGGAGCCGCGTACATGTACAACTATACCGGCAAGGCCA
AGTGGAAGACTGCGGCGGAGGGCCTCTTGAACGTCACGCTCGACACCTTT
TTCCCGGCGAAGTATGGTGGAAACATCATGTCCGAAATTCTCTGTGAGCC
GACCGAAGTGTGCAATGACAACGAAATTCTGTTCAAGGGTCTCGTCACCG
GATGGCTTGGACTTGTGGCCCTAGTGATGCCGTCGACGTATGATAGCATT
TTGCCAAAGCTGCAGGGGTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGG
AATGAGCAACAACACTTGTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATG
GATGGAACGGAATGGAGGAGGAAATCGCCGTCACCAACGTTCTATCCTCC
GCGTTGGTCAACACGAAGAAAACCGCCCCTGTGACCTCCAGCACCGGAGG
CAATAGTAGTAGTGATCCGAACGCAGGTACGGGCGACAACACCGGGAGCA
GCGGCAGTACCGAATCGAAGATCACCACGGGCGACAAGGCGGGTGCCTCC
ATCCTGACCATTGCCTTTGTGGGCATGTGGGGAGGTATGATCGCTTGGAT
GGTCATTGGCGGTTGAATGACCTGGTATCATGGAAACGAAACCGGTCAGA
TTCCCGGTGCTTTCCCTAGCAAGTGGTGGGAGGGTAGCGCGCTTTTCACA
AGTTTGCTCCTCTACTGGTATTACACTGGAGACAGTACCTACAACGACGA
GGTCCGTCAGGGTATGCAATGGCAGGCGGGTGACTGCGATTACATGCCCG
CCAATTACAGTAGTTACCTGGGTAACGACGATCAAATGTTCTGGGGTCTT
GCCGCCATCACCGCTGCCGAGATCGAATTCGCCGACAGCTCCTCCGGATA
TTCCTGGCTCGCTTTGGCCCAGGGTGTTTACAACACTCAGATCGACCGAT
GGGATGATTCGACATGTGGCGGCGGTTTGCGCTGGCAGATCTACCCTTAC
GAGGCCGGTTACGCCATGAAGAACTCCATCTCGAACGGAGGTTTGTTCCA
ACTCGCCGCCCGCCTGGCCCGCTACACCTCAAACGACACATACGCCGACT
GGGCAGAGAAGATCTTCGATTGGTGTGCCTCGACTCCGTTGCTAAACAAC
GAGACTTGGAACGTGGCCGACTCCACCGATGTCGATAACAGCTGCTCCAC
CCAAGGCAACAACCAGTGGTCTTACAACTACGGCGTGTTCTTGACGGGAG
CCGCGTACATGTACAACTATACCGGCAAGGCCAAGTGGAAGACTGCGGCG
GAGGGCCTCTTGAACGTCACGCTCGACACCTTTTTCCCGGCGAAGTATGG
TGGAAACATCATGTCCGAAATTCTCTGTGAGCCGACCGAAGTGTGCAATG
ACAACGAAATTCTGTTCAAGGGTCTCGTCACCGGATGGCTTGGACTTGTG
GCCCTAGTGATGCCGTCGACGTATGATAGCATTTTGCCAAAGCTGCAGGG
GTCTGCCGAAGCTGCCGCAGCCTCCTGCAGCGGAATGAGCAACAACACTT
GTGGTGTGCGCTGGTGGCCCAAGAAGTGGGATGGATGGAACGGAATGGAG
GAGGAAATCGCCGTCACCAACGTTCTATCCTCCGCGTTGGTCAACACGAA
GAAAACCGCCCCTGTGACCTCCAGCACCGGAGGCAATAGTAGTAGTGATC
CGAACGCAGGTACGGGCGACAACACCGGGAGCAGCGGCAGTACCGAATCG
AAGATCACCACGGGCGACAAGGCGGGTGCCTCCATCCTGACCATTGCCTT
TGTGGGCATGTGGGGAGGTATGATCGCTTGGATGGTCATTGGCGGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008496mannan endo-1,6-alpha-mannosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49344ASPNIDRAFT_49344Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49344-T1.exon1ASPNIDRAFT_49344-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49344-T1.exon2ASPNIDRAFT_49344-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49344-T1.exon3ASPNIDRAFT_49344-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49344-T1.cdsASPNIDRAFT_49344-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49344-T1ASPNIDRAFT_49344-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteCAZy:GH76
DBxrefInterPro:IPR008928
DBxrefInterPro:IPR014480
DBxrefInterPro:IPR005198
DBxrefPFAM:PF03663
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:897607..898972 +
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